Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 MIR320B1-201ENST00000390209 79 ntBASIC6.19□□□□□ -1.42
HOXC12P31275 SUMO3-202ENST00000397893 520 ntTSL 2 BASIC6.19□□□□□ -1.42
HOXC12P31275 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
HOXC12P31275 RN7SKP142-201ENST00000411236 328 ntBASIC6.19□□□□□ -1.42
HOXC12P31275 PGBD4P8-201ENST00000412993 562 ntBASIC6.19□□□□□ -1.42
HOXC12P31275 TPT1P2-201ENST00000413105 503 ntBASIC6.19□□□□□ -1.42
HOXC12P31275 RAD23BP2-201ENST00000416003 1207 ntBASIC6.19□□□□□ -1.42
HOXC12P31275 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC6.19□□□□□ -1.42
HOXC12P31275 MGAT2P2-201ENST00000427194 797 ntBASIC6.19□□□□□ -1.42
HOXC12P31275 MED14P1-201ENST00000430517 648 ntBASIC6.19□□□□□ -1.42
HOXC12P31275 AL138733.2-201ENST00000431947 804 ntTSL 5 BASIC6.19□□□□□ -1.42
HOXC12P31275 CCNB1IP1P2-201ENST00000432876 818 ntBASIC6.19□□□□□ -1.42
HOXC12P31275 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC6.19□□□□□ -1.42
HOXC12P31275 MYL6P3-201ENST00000436904 432 ntBASIC6.19□□□□□ -1.42
HOXC12P31275 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC6.19□□□□□ -1.42
HOXC12P31275 RPS24P1-201ENST00000438550 371 ntBASIC6.19□□□□□ -1.42
HOXC12P31275 MTND1P30-201ENST00000441241 901 ntBASIC6.19□□□□□ -1.42
HOXC12P31275 ZNF619P1-201ENST00000446539 752 ntBASIC6.19□□□□□ -1.42
HOXC12P31275 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC6.19□□□□□ -1.42
HOXC12P31275 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC6.19□□□□□ -1.42
HOXC12P31275 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
HOXC12P31275 OR52E3P-201ENST00000452083 936 ntBASIC6.19□□□□□ -1.42
HOXC12P31275 AL117382.2-201ENST00000455642 403 ntTSL 3 BASIC6.19□□□□□ -1.42
HOXC12P31275 ANK3-207ENST00000460468 677 ntTSL 3 BASIC6.19□□□□□ -1.42
HOXC12P31275 PFN1P8-201ENST00000497012 543 ntBASIC6.19□□□□□ -1.42
HOXC12P31275 AC146944.3-201ENST00000509969 371 ntBASIC6.19□□□□□ -1.42
HOXC12P31275 CYP4F27P-201ENST00000514557 494 ntBASIC6.19□□□□□ -1.42
HOXC12P31275 MINOS1P4-201ENST00000515470 318 ntBASIC6.19□□□□□ -1.42
HOXC12P31275 RNU6-720P-201ENST00000516363 108 ntBASIC6.19□□□□□ -1.42
HOXC12P31275 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC6.19□□□□□ -1.42
HOXC12P31275 AP003033.2-201ENST00000528901 805 ntBASIC6.19□□□□□ -1.42
HOXC12P31275 RERGL-202ENST00000536890 367 ntTSL 3 BASIC6.19□□□□□ -1.42
HOXC12P31275 PCED1B-AS1-202ENST00000547600 523 ntTSL 3 BASIC6.19□□□□□ -1.42
HOXC12P31275 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
HOXC12P31275 AC090181.1-201ENST00000560446 264 ntTSL 3 BASIC6.19□□□□□ -1.42
HOXC12P31275 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC6.19□□□□□ -1.42
HOXC12P31275 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC6.19□□□□□ -1.42
HOXC12P31275 MIR4271-201ENST00000582451 67 ntBASIC6.19□□□□□ -1.42
HOXC12P31275 AC011476.3-203ENST00000586961 346 ntTSL 5 BASIC6.19□□□□□ -1.42
HOXC12P31275 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC6.19□□□□□ -1.42
HOXC12P31275 AC036176.3-201ENST00000602456 418 ntBASIC6.19□□□□□ -1.42
HOXC12P31275 AP003465.2-201ENST00000602571 373 ntBASIC6.19□□□□□ -1.42
HOXC12P31275 AL391497.1-201ENST00000608671 547 ntBASIC6.19□□□□□ -1.42
HOXC12P31275 MIR7109-201ENST00000613748 65 ntBASIC6.19□□□□□ -1.42
HOXC12P31275 MIR6849-201ENST00000618543 69 ntBASIC6.19□□□□□ -1.42
HOXC12P31275 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC6.19□□□□□ -1.42
HOXC12P31275 AC087894.3-201ENST00000623682 349 ntBASIC6.19□□□□□ -1.42
HOXC12P31275 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC6.19□□□□□ -1.42
HOXC12P31275 PCMTD1P7-201ENST00000634506 357 ntBASIC6.19□□□□□ -1.42
HOXC12P31275 MBD5-221ENST00000637159 902 ntTSL 5 BASIC6.19□□□□□ -1.42
HOXC12P31275 AL596275.2-208ENST00000641192 594 ntBASIC6.19□□□□□ -1.42
HOXC12P31275 CASC19-232ENST00000641480 1244 ntBASIC6.19□□□□□ -1.42
HOXC12P31275 KRBOX1-202ENST00000418176 2566 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
HOXC12P31275 AL356361.1-201ENST00000400943 1459 ntBASIC6.19□□□□□ -1.42
HOXC12P31275 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
HOXC12P31275 KIAA0391-203ENST00000534898 2611 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
HOXC12P31275 REST-201ENST00000309042 7300 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
HOXC12P31275 EEF1A1P12-201ENST00000443590 1346 ntBASIC6.19□□□□□ -1.42
HOXC12P31275 AC109315.1-201ENST00000584143 1347 ntBASIC6.19□□□□□ -1.42
HOXC12P31275 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC6.19□□□□□ -1.42
HOXC12P31275 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
HOXC12P31275 PIGA-216ENST00000637296 2113 ntTSL 5 BASIC6.19□□□□□ -1.42
HOXC12P31275 AL354854.1-201ENST00000455940 1363 ntBASIC6.18□□□□□ -1.42
HOXC12P31275 EPHA6-204ENST00000502694 1582 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
HOXC12P31275 RAD17P2-201ENST00000451754 1977 ntBASIC6.18□□□□□ -1.42
HOXC12P31275 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
HOXC12P31275 HSDL2-201ENST00000398803 2983 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
HOXC12P31275 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
HOXC12P31275 CASC19-260ENST00000641828 2001 ntBASIC6.18□□□□□ -1.42
HOXC12P31275 NF1-202ENST00000358273 12425 ntAPPRIS ALT1 TSL 1 (best) BASIC6.18□□□□□ -1.42
HOXC12P31275 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
HOXC12P31275 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC6.18□□□□□ -1.42
HOXC12P31275 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
HOXC12P31275 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
HOXC12P31275 AL672167.1-206ENST00000356293 943 ntBASIC6.18□□□□□ -1.42
HOXC12P31275 SNORA62.2-201ENST00000364672 152 ntBASIC6.18□□□□□ -1.42
HOXC12P31275 RNA5SP172-201ENST00000365061 118 ntBASIC6.18□□□□□ -1.42
HOXC12P31275 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
HOXC12P31275 CD209-205ENST00000394161 507 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
HOXC12P31275 AL359715.1-201ENST00000404330 555 ntBASIC6.18□□□□□ -1.42
HOXC12P31275 AC022028.1-201ENST00000412054 408 ntBASIC6.18□□□□□ -1.42
HOXC12P31275 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC6.18□□□□□ -1.42
HOXC12P31275 AC114814.2-201ENST00000419195 485 ntBASIC6.18□□□□□ -1.42
HOXC12P31275 RPL36P18-201ENST00000419316 318 ntBASIC6.18□□□□□ -1.42
HOXC12P31275 RPL17P17-201ENST00000419491 557 ntBASIC6.18□□□□□ -1.42
HOXC12P31275 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC6.18□□□□□ -1.42
HOXC12P31275 OFD1P2Y-201ENST00000421895 1149 ntBASIC6.18□□□□□ -1.42
HOXC12P31275 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC6.18□□□□□ -1.42
HOXC12P31275 FTLP19-201ENST00000433300 394 ntBASIC6.18□□□□□ -1.42
HOXC12P31275 AC106874.1-201ENST00000440495 646 ntTSL 3 BASIC6.18□□□□□ -1.42
HOXC12P31275 AC016908.1-201ENST00000442571 1219 ntBASIC6.18□□□□□ -1.42
HOXC12P31275 BX005266.3-201ENST00000443013 1075 ntBASIC6.18□□□□□ -1.42
HOXC12P31275 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC6.18□□□□□ -1.42
HOXC12P31275 AL445991.1-201ENST00000450381 475 ntBASIC6.18□□□□□ -1.42
HOXC12P31275 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC6.18□□□□□ -1.42
HOXC12P31275 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC6.18□□□□□ -1.42
HOXC12P31275 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC6.18□□□□□ -1.42
HOXC12P31275 MED28P7-201ENST00000456611 530 ntBASIC6.18□□□□□ -1.42
HOXC12P31275 PNPLA4P1-201ENST00000458328 305 ntBASIC6.18□□□□□ -1.42
HOXC12P31275 PGBD4P1-201ENST00000473644 407 ntBASIC6.18□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms