Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 AL358913.2-201ENST00000553881 1548 ntBASIC7.73□□□□□ -1.17
RFX1P22670 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
RFX1P22670 AGBL1-205ENST00000635782 3201 ntAPPRIS P2 TSL 5 BASIC7.73□□□□□ -1.17
RFX1P22670 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC7.72□□□□□ -1.17
RFX1P22670 OR7C1-205ENST00000642030 11778 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
RFX1P22670 KCNMB2-202ENST00000420517 1563 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
RFX1P22670 AL355306.2-202ENST00000634380 2281 ntTSL 5 BASIC7.72□□□□□ -1.17
RFX1P22670 MEPE-208ENST00000540395 2135 ntAPPRIS ALT2 TSL 4 BASIC7.72□□□□□ -1.17
RFX1P22670 AC004988.1-201ENST00000415237 1771 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
RFX1P22670 TMTC2-204ENST00000549919 6211 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
RFX1P22670 IFIT1P1-201ENST00000400497 1449 ntBASIC7.72□□□□□ -1.17
RFX1P22670 SYNPO2-203ENST00000434046 3588 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
RFX1P22670 ZNF840P-201ENST00000504759 1996 ntBASIC7.72□□□□□ -1.17
RFX1P22670 AKR1C2-201ENST00000380753 3756 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
RFX1P22670 MGAM-202ENST00000475668 9172 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
RFX1P22670 ELOVL5-203ENST00000370918 3081 ntTSL 2 BASIC7.72□□□□□ -1.17
RFX1P22670 BUB1-202ENST00000409311 3287 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
RFX1P22670 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
RFX1P22670 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC7.72□□□□□ -1.17
RFX1P22670 RNU6-1017P-201ENST00000363613 106 ntBASIC7.72□□□□□ -1.17
RFX1P22670 FAM204BP-201ENST00000369171 701 ntBASIC7.72□□□□□ -1.17
RFX1P22670 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
RFX1P22670 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC7.72□□□□□ -1.17
RFX1P22670 AL136131.1-201ENST00000406079 803 ntBASIC7.72□□□□□ -1.17
RFX1P22670 MIR1284-201ENST00000408337 120 ntBASIC7.72□□□□□ -1.17
RFX1P22670 METTL5-204ENST00000409340 472 ntTSL 5 BASIC7.72□□□□□ -1.17
RFX1P22670 AC007091.1-201ENST00000412563 566 ntTSL 5 BASIC7.72□□□□□ -1.17
RFX1P22670 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC7.72□□□□□ -1.17
RFX1P22670 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC7.72□□□□□ -1.17
RFX1P22670 LINC00993-201ENST00000420453 540 ntBASIC7.72□□□□□ -1.17
RFX1P22670 GNRHR-202ENST00000420975 859 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
RFX1P22670 SLC44A3-AS1-205ENST00000424505 612 ntBASIC7.72□□□□□ -1.17
RFX1P22670 CCNB1IP1P1-201ENST00000428976 839 ntBASIC7.72□□□□□ -1.17
RFX1P22670 AC069154.1-201ENST00000432914 542 ntBASIC7.72□□□□□ -1.17
RFX1P22670 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC7.72□□□□□ -1.17
RFX1P22670 UBE2FP3-201ENST00000436366 524 ntBASIC7.72□□□□□ -1.17
RFX1P22670 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC7.72□□□□□ -1.17
RFX1P22670 RPEP4-201ENST00000437636 602 ntBASIC7.72□□□□□ -1.17
RFX1P22670 AL138899.2-201ENST00000439139 499 ntBASIC7.72□□□□□ -1.17
RFX1P22670 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC7.72□□□□□ -1.17
RFX1P22670 OR51P1P-201ENST00000447547 942 ntBASIC7.72□□□□□ -1.17
RFX1P22670 AC093392.2-201ENST00000450682 337 ntBASIC7.72□□□□□ -1.17
RFX1P22670 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC7.72□□□□□ -1.17
RFX1P22670 DNAJB5P1-201ENST00000454004 806 ntBASIC7.72□□□□□ -1.17
RFX1P22670 DNAJC19P1-201ENST00000455312 319 ntBASIC7.72□□□□□ -1.17
RFX1P22670 AC010307.1-201ENST00000467206 836 ntBASIC7.72□□□□□ -1.17
RFX1P22670 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC7.72□□□□□ -1.17
RFX1P22670 RPS4XP23-201ENST00000487801 237 ntBASIC7.72□□□□□ -1.17
RFX1P22670 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
RFX1P22670 EGFLAM-211ENST00000514476 676 ntTSL 2 BASIC7.72□□□□□ -1.17
RFX1P22670 LINC01603-202ENST00000519557 712 ntTSL 3 BASIC7.72□□□□□ -1.17
RFX1P22670 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC7.72□□□□□ -1.17
RFX1P22670 AC090458.1-203ENST00000527757 546 ntTSL 3 BASIC7.72□□□□□ -1.17
RFX1P22670 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
RFX1P22670 AC079362.1-202ENST00000547089 278 ntTSL 3 BASIC7.72□□□□□ -1.17
RFX1P22670 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC7.72□□□□□ -1.17
RFX1P22670 C14orf2-209ENST00000554880 707 ntAPPRIS P1 TSL 3 BASIC7.72□□□□□ -1.17
RFX1P22670 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC7.72□□□□□ -1.17
RFX1P22670 PCMTD1P2-201ENST00000565017 355 ntBASIC7.72□□□□□ -1.17
RFX1P22670 AC010287.1-201ENST00000566916 357 ntBASIC7.72□□□□□ -1.17
RFX1P22670 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC7.72□□□□□ -1.17
RFX1P22670 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC7.72□□□□□ -1.17
RFX1P22670 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC7.72□□□□□ -1.17
RFX1P22670 AC116651.1-201ENST00000609724 556 ntBASIC7.72□□□□□ -1.17
RFX1P22670 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC7.72□□□□□ -1.17
RFX1P22670 AC078909.2-201ENST00000620584 398 ntBASIC7.72□□□□□ -1.17
RFX1P22670 AL356266.1-201ENST00000623311 483 ntBASIC7.72□□□□□ -1.17
RFX1P22670 SEPT14P19-203ENST00000633205 211 ntBASIC7.72□□□□□ -1.17
RFX1P22670 DDX58-202ENST00000379883 4353 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
RFX1P22670 GDNF-202ENST00000344622 3655 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
RFX1P22670 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC7.72□□□□□ -1.17
RFX1P22670 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
RFX1P22670 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
RFX1P22670 NCOA4P3-201ENST00000513203 1877 ntBASIC7.72□□□□□ -1.17
RFX1P22670 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC7.72□□□□□ -1.17
RFX1P22670 VCAN-202ENST00000342785 7154 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
RFX1P22670 AC107982.1-201ENST00000507171 1300 ntBASIC7.72□□□□□ -1.17
RFX1P22670 PPP2R5C-205ENST00000445439 1526 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
RFX1P22670 LINC01968-202ENST00000423318 3647 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
RFX1P22670 VTI1A-201ENST00000393077 4131 ntAPPRIS P1 TSL 2 BASIC7.71□□□□□ -1.17
RFX1P22670 AC104837.1-201ENST00000444644 1587 ntBASIC7.71□□□□□ -1.17
RFX1P22670 MMP10-201ENST00000279441 1758 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
RFX1P22670 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
RFX1P22670 AL365204.1-201ENST00000423440 1430 ntTSL 5 BASIC7.71□□□□□ -1.17
RFX1P22670 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.17
RFX1P22670 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.17
RFX1P22670 LPAR1-205ENST00000541779 2490 ntAPPRIS ALT1 TSL 1 (best) BASIC7.71□□□□□ -1.17
RFX1P22670 NBPF14-201ENST00000581201 2931 ntTSL 5 BASIC7.71□□□□□ -1.18
RFX1P22670 TXNIP-204ENST00000582401 2926 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
RFX1P22670 NBPF26-206ENST00000617913 2931 ntTSL 5 BASIC7.71□□□□□ -1.18
RFX1P22670 ASNSP1-204ENST00000641977 1664 ntBASIC7.71□□□□□ -1.18
RFX1P22670 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
RFX1P22670 CDR1-202ENST00000625883 1485 ntBASIC7.71□□□□□ -1.18
RFX1P22670 PPP3R2-201ENST00000374806 3387 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
RFX1P22670 NFATC3-201ENST00000329524 6144 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
RFX1P22670 SPRR2D-202ENST00000368756 788 ntAPPRIS P1 TSL 2 BASIC7.71□□□□□ -1.18
RFX1P22670 AP004243.1-202ENST00000398983 969 ntTSL 5 BASIC7.71□□□□□ -1.18
RFX1P22670 RNU4ATAC2P-201ENST00000408674 126 ntBASIC7.71□□□□□ -1.18
RFX1P22670 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC7.71□□□□□ -1.18
RFX1P22670 AC234781.4-201ENST00000419384 244 ntBASIC7.71□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms