Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
HLA-DPA1P20036 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC5.57□□□□□ -1.52
HLA-DPA1P20036 HCG18-243ENST00000602498 327 ntTSL 3 BASIC5.57□□□□□ -1.52
HLA-DPA1P20036 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC5.57□□□□□ -1.52
HLA-DPA1P20036 AC007786.3-201ENST00000615154 596 ntBASIC5.57□□□□□ -1.52
HLA-DPA1P20036 MIR6133-201ENST00000617057 108 ntBASIC5.57□□□□□ -1.52
HLA-DPA1P20036 RMST_5.1-201ENST00000618704 126 ntBASIC5.57□□□□□ -1.52
HLA-DPA1P20036 MIR4302-201ENST00000638058 60 ntBASIC5.57□□□□□ -1.52
HLA-DPA1P20036 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.57□□□□□ -1.52
HLA-DPA1P20036 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
HLA-DPA1P20036 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
HLA-DPA1P20036 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
HLA-DPA1P20036 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
HLA-DPA1P20036 AC087516.1-201ENST00000561236 2428 ntBASIC5.57□□□□□ -1.52
HLA-DPA1P20036 NXF4-202ENST00000416098 1465 ntBASIC5.57□□□□□ -1.52
HLA-DPA1P20036 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
HLA-DPA1P20036 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.57□□□□□ -1.52
HLA-DPA1P20036 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC5.57□□□□□ -1.52
HLA-DPA1P20036 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.56□□□□□ -1.52
HLA-DPA1P20036 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
HLA-DPA1P20036 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
HLA-DPA1P20036 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC5.56□□□□□ -1.52
HLA-DPA1P20036 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
HLA-DPA1P20036 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
HLA-DPA1P20036 AL359715.3-201ENST00000569267 2123 ntBASIC5.56□□□□□ -1.52
HLA-DPA1P20036 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
HLA-DPA1P20036 AL360270.2-201ENST00000562952 5985 ntBASIC5.56□□□□□ -1.52
HLA-DPA1P20036 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
HLA-DPA1P20036 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
HLA-DPA1P20036 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
HLA-DPA1P20036 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
HLA-DPA1P20036 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
HLA-DPA1P20036 RNU4-7P-201ENST00000364758 141 ntBASIC5.56□□□□□ -1.52
HLA-DPA1P20036 RNU4-2-201ENST00000365668 141 ntBASIC5.56□□□□□ -1.52
HLA-DPA1P20036 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
HLA-DPA1P20036 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC5.56□□□□□ -1.52
HLA-DPA1P20036 SNORD56.6-201ENST00000384569 71 ntBASIC5.56□□□□□ -1.52
HLA-DPA1P20036 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
HLA-DPA1P20036 MTCYBP7-201ENST00000419540 1134 ntBASIC5.56□□□□□ -1.52
HLA-DPA1P20036 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC5.56□□□□□ -1.52
HLA-DPA1P20036 TNPO1P1-201ENST00000423641 1138 ntBASIC5.56□□□□□ -1.52
HLA-DPA1P20036 AJ239321.1-201ENST00000424255 564 ntBASIC5.56□□□□□ -1.52
HLA-DPA1P20036 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC5.56□□□□□ -1.52
HLA-DPA1P20036 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
HLA-DPA1P20036 AC069277.2-201ENST00000454211 432 ntBASIC5.56□□□□□ -1.52
HLA-DPA1P20036 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC5.56□□□□□ -1.52
HLA-DPA1P20036 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC5.56□□□□□ -1.52
HLA-DPA1P20036 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC5.56□□□□□ -1.52
HLA-DPA1P20036 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC5.56□□□□□ -1.52
HLA-DPA1P20036 AC027544.3-201ENST00000535082 757 ntBASIC5.56□□□□□ -1.52
HLA-DPA1P20036 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
HLA-DPA1P20036 TRAV11-201ENST00000539512 339 ntBASIC5.56□□□□□ -1.52
HLA-DPA1P20036 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC5.56□□□□□ -1.52
HLA-DPA1P20036 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC5.56□□□□□ -1.52
HLA-DPA1P20036 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC5.56□□□□□ -1.52
HLA-DPA1P20036 MIR4505-201ENST00000582238 73 ntBASIC5.56□□□□□ -1.52
HLA-DPA1P20036 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC5.56□□□□□ -1.52
HLA-DPA1P20036 AC011445.2-201ENST00000599274 173 ntBASIC5.56□□□□□ -1.52
HLA-DPA1P20036 SNX6P1-201ENST00000601728 1224 ntBASIC5.56□□□□□ -1.52
HLA-DPA1P20036 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.56□□□□□ -1.52
HLA-DPA1P20036 AC009237.13-201ENST00000603193 276 ntBASIC5.56□□□□□ -1.52
HLA-DPA1P20036 OR51C1P-201ENST00000608504 942 ntBASIC5.56□□□□□ -1.52
HLA-DPA1P20036 AL133370.2-201ENST00000619934 439 ntBASIC5.56□□□□□ -1.52
HLA-DPA1P20036 uc_338.7-201ENST00000621834 124 ntBASIC5.56□□□□□ -1.52
HLA-DPA1P20036 AC021766.1-201ENST00000624404 741 ntBASIC5.56□□□□□ -1.52
HLA-DPA1P20036 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC5.56□□□□□ -1.52
HLA-DPA1P20036 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
HLA-DPA1P20036 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
HLA-DPA1P20036 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC5.56□□□□□ -1.52
HLA-DPA1P20036 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
HLA-DPA1P20036 AC140134.1-201ENST00000511830 3544 ntBASIC5.56□□□□□ -1.52
HLA-DPA1P20036 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC5.56□□□□□ -1.52
HLA-DPA1P20036 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
HLA-DPA1P20036 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
HLA-DPA1P20036 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
HLA-DPA1P20036 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
HLA-DPA1P20036 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
HLA-DPA1P20036 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.56□□□□□ -1.52
HLA-DPA1P20036 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.56□□□□□ -1.52
HLA-DPA1P20036 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
HLA-DPA1P20036 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.56□□□□□ -1.52
HLA-DPA1P20036 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
HLA-DPA1P20036 CD86-204ENST00000469710 1604 ntTSL 2 BASIC5.56□□□□□ -1.52
HLA-DPA1P20036 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
HLA-DPA1P20036 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
HLA-DPA1P20036 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
HLA-DPA1P20036 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC5.55□□□□□ -1.52
HLA-DPA1P20036 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
HLA-DPA1P20036 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC5.55□□□□□ -1.52
HLA-DPA1P20036 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
HLA-DPA1P20036 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
HLA-DPA1P20036 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
HLA-DPA1P20036 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
HLA-DPA1P20036 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
HLA-DPA1P20036 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
HLA-DPA1P20036 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
HLA-DPA1P20036 RN7SKP28-201ENST00000364770 305 ntBASIC5.55□□□□□ -1.52
HLA-DPA1P20036 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC5.55□□□□□ -1.52
HLA-DPA1P20036 OR6E1P-201ENST00000414424 923 ntBASIC5.55□□□□□ -1.52
HLA-DPA1P20036 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC5.55□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms