Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
PTPN1P18031 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
PTPN1P18031 TLR7-201ENST00000380659 5011 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
PTPN1P18031 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
PTPN1P18031 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC6.47□□□□□ -1.37
PTPN1P18031 BRAFP1-201ENST00000445336 2703 ntBASIC6.47□□□□□ -1.37
PTPN1P18031 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
PTPN1P18031 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC6.47□□□□□ -1.37
PTPN1P18031 AC008549.2-201ENST00000333482 706 ntBASIC6.47□□□□□ -1.37
PTPN1P18031 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
PTPN1P18031 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC6.47□□□□□ -1.37
PTPN1P18031 AP003170.5-201ENST00000397185 335 ntBASIC6.47□□□□□ -1.37
PTPN1P18031 SFR1P1-201ENST00000403720 688 ntBASIC6.47□□□□□ -1.37
PTPN1P18031 AL008987.1-201ENST00000415528 237 ntBASIC6.47□□□□□ -1.37
PTPN1P18031 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC6.47□□□□□ -1.37
PTPN1P18031 RPS15AP30-201ENST00000420976 390 ntBASIC6.47□□□□□ -1.37
PTPN1P18031 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC6.47□□□□□ -1.37
PTPN1P18031 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC6.47□□□□□ -1.37
PTPN1P18031 CCNB1IP1P1-201ENST00000428976 839 ntBASIC6.47□□□□□ -1.37
PTPN1P18031 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC6.47□□□□□ -1.37
PTPN1P18031 PTGES3P1-201ENST00000439531 483 ntBASIC6.47□□□□□ -1.37
PTPN1P18031 HMGN1P2-201ENST00000445197 310 ntBASIC6.47□□□□□ -1.37
PTPN1P18031 AC069540.1-201ENST00000446320 988 ntBASIC6.47□□□□□ -1.37
PTPN1P18031 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC6.47□□□□□ -1.37
PTPN1P18031 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC6.47□□□□□ -1.37
PTPN1P18031 CCNB1IP1P3-201ENST00000454702 829 ntBASIC6.47□□□□□ -1.37
PTPN1P18031 AC112187.1-201ENST00000455837 479 ntBASIC6.47□□□□□ -1.37
PTPN1P18031 AC005410.1-202ENST00000460347 485 ntBASIC6.47□□□□□ -1.37
PTPN1P18031 RAP1BP2-201ENST00000478270 544 ntBASIC6.47□□□□□ -1.37
PTPN1P18031 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC6.47□□□□□ -1.37
PTPN1P18031 AC091951.3-201ENST00000504093 246 ntBASIC6.47□□□□□ -1.37
PTPN1P18031 B4GALNT2P1-201ENST00000508857 307 ntBASIC6.47□□□□□ -1.37
PTPN1P18031 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC6.47□□□□□ -1.37
PTPN1P18031 RNA5SP340-201ENST00000517132 107 ntBASIC6.47□□□□□ -1.37
PTPN1P18031 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC6.47□□□□□ -1.37
PTPN1P18031 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC6.47□□□□□ -1.37
PTPN1P18031 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC6.47□□□□□ -1.37
PTPN1P18031 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC6.47□□□□□ -1.37
PTPN1P18031 NDUFAF4P1-201ENST00000559425 519 ntBASIC6.47□□□□□ -1.37
PTPN1P18031 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC6.47□□□□□ -1.37
PTPN1P18031 AP005119.1-201ENST00000580956 292 ntBASIC6.47□□□□□ -1.37
PTPN1P18031 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC6.47□□□□□ -1.37
PTPN1P18031 NBR2-204ENST00000587322 63 ntBASIC6.47□□□□□ -1.37
PTPN1P18031 AC015802.2-201ENST00000589690 189 ntBASIC6.47□□□□□ -1.37
PTPN1P18031 AC121247.2-201ENST00000604776 136 ntBASIC6.47□□□□□ -1.37
PTPN1P18031 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC6.47□□□□□ -1.37
PTPN1P18031 TUSC7.1-201ENST00000610969 165 ntBASIC6.47□□□□□ -1.37
PTPN1P18031 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
PTPN1P18031 AL357562.1-201ENST00000624911 609 ntBASIC6.47□□□□□ -1.37
PTPN1P18031 OR8B1P-202ENST00000641132 1178 ntBASIC6.47□□□□□ -1.37
PTPN1P18031 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC6.47□□□□□ -1.37
PTPN1P18031 AC021755.1-201ENST00000559747 1447 ntBASIC6.47□□□□□ -1.37
PTPN1P18031 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
PTPN1P18031 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
PTPN1P18031 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
PTPN1P18031 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC6.47□□□□□ -1.37
PTPN1P18031 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC6.47□□□□□ -1.37
PTPN1P18031 AC006511.3-201ENST00000624929 1783 ntBASIC6.46□□□□□ -1.37
PTPN1P18031 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC6.46□□□□□ -1.37
PTPN1P18031 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC6.46□□□□□ -1.37
PTPN1P18031 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
PTPN1P18031 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
PTPN1P18031 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
PTPN1P18031 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC6.46□□□□□ -1.37
PTPN1P18031 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
PTPN1P18031 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC6.46□□□□□ -1.37
PTPN1P18031 MTND4P5-201ENST00000435821 1374 ntBASIC6.46□□□□□ -1.37
PTPN1P18031 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC6.46□□□□□ -1.37
PTPN1P18031 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC6.46□□□□□ -1.37
PTPN1P18031 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
PTPN1P18031 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
PTPN1P18031 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
PTPN1P18031 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
PTPN1P18031 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC6.46□□□□□ -1.38
PTPN1P18031 PKIB-203ENST00000368446 556 ntTSL 2 BASIC6.46□□□□□ -1.38
PTPN1P18031 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.38
PTPN1P18031 Y_RNA.472-201ENST00000384322 102 ntBASIC6.46□□□□□ -1.38
PTPN1P18031 Y_RNA.578-201ENST00000390903 88 ntBASIC6.46□□□□□ -1.38
PTPN1P18031 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC6.46□□□□□ -1.38
PTPN1P18031 AC021876.1-201ENST00000425959 359 ntBASIC6.46□□□□□ -1.38
PTPN1P18031 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC6.46□□□□□ -1.38
PTPN1P18031 AL008629.1-201ENST00000438615 184 ntBASIC6.46□□□□□ -1.38
PTPN1P18031 ATP6V1E1P1-201ENST00000439215 681 ntBASIC6.46□□□□□ -1.38
PTPN1P18031 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC6.46□□□□□ -1.38
PTPN1P18031 DNAJA1P5-201ENST00000440278 943 ntBASIC6.46□□□□□ -1.38
PTPN1P18031 MTCYBP12-201ENST00000440559 1134 ntBASIC6.46□□□□□ -1.38
PTPN1P18031 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC6.46□□□□□ -1.38
PTPN1P18031 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC6.46□□□□□ -1.38
PTPN1P18031 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC6.46□□□□□ -1.38
PTPN1P18031 RPL23AP60-201ENST00000450011 454 ntBASIC6.46□□□□□ -1.38
PTPN1P18031 AL133217.1-201ENST00000450980 425 ntBASIC6.46□□□□□ -1.38
PTPN1P18031 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC6.46□□□□□ -1.38
PTPN1P18031 RPL17P2-201ENST00000491913 451 ntBASIC6.46□□□□□ -1.38
PTPN1P18031 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC6.46□□□□□ -1.38
PTPN1P18031 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC6.46□□□□□ -1.38
PTPN1P18031 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC6.46□□□□□ -1.38
PTPN1P18031 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC6.46□□□□□ -1.38
PTPN1P18031 AC104417.1-201ENST00000523974 751 ntBASIC6.46□□□□□ -1.38
PTPN1P18031 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC6.46□□□□□ -1.38
PTPN1P18031 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 70.9 ms