Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 MEGF10-201ENST00000274473 7594 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
APOBP04114 LAMB4-201ENST00000205386 5857 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
APOBP04114 UHRF1BP1-201ENST00000192788 9570 ntAPPRIS P2 TSL 1 (best) BASIC3.12□□□□□ -1.91
APOBP04114 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC3.12□□□□□ -1.91
APOBP04114 ITSN2-202ENST00000361999 5814 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
APOBP04114 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC3.12□□□□□ -1.91
APOBP04114 CECR2-206ENST00000612582 9645 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
APOBP04114 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
APOBP04114 ZNF365-204ENST00000395251 2695 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
APOBP04114 AP2B1-221ENST00000621914 5702 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
APOBP04114 AC009237.10-201ENST00000414112 510 ntBASIC3.12□□□□□ -1.91
APOBP04114 AC009237.5-201ENST00000414271 501 ntBASIC3.12□□□□□ -1.91
APOBP04114 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC3.12□□□□□ -1.91
APOBP04114 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC3.12□□□□□ -1.91
APOBP04114 SCARNA10-201ENST00000459255 330 ntBASIC3.12□□□□□ -1.91
APOBP04114 RPL21P126-201ENST00000470049 478 ntBASIC3.12□□□□□ -1.91
APOBP04114 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC3.12□□□□□ -1.91
APOBP04114 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC3.12□□□□□ -1.91
APOBP04114 AC015726.1-202ENST00000602532 475 ntTSL 5 BASIC3.12□□□□□ -1.91
APOBP04114 DYNC1H1-201ENST00000360184 14333 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
APOBP04114 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC3.12□□□□□ -1.91
APOBP04114 NBPF11-202ENST00000614015 4630 ntAPPRIS P2 TSL 2 BASIC3.12□□□□□ -1.91
APOBP04114 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC3.12□□□□□ -1.91
APOBP04114 F5-202ENST00000367797 7024 ntAPPRIS P2 TSL 1 (best) BASIC3.12□□□□□ -1.91
APOBP04114 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
APOBP04114 RCC2P2-201ENST00000422174 918 ntBASIC3.12□□□□□ -1.91
APOBP04114 RPL23AP83-201ENST00000434984 473 ntBASIC3.12□□□□□ -1.91
APOBP04114 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC3.12□□□□□ -1.91
APOBP04114 MEMO1P4-201ENST00000453590 386 ntBASIC3.12□□□□□ -1.91
APOBP04114 RN7SL244P-201ENST00000493405 297 ntBASIC3.12□□□□□ -1.91
APOBP04114 AC106785.1-201ENST00000565935 262 ntBASIC3.12□□□□□ -1.91
APOBP04114 SNX18P1Y-201ENST00000616231 511 ntBASIC3.12□□□□□ -1.91
APOBP04114 VWA3A-202ENST00000389398 4600 ntAPPRIS P2 TSL 5 BASIC3.12□□□□□ -1.91
APOBP04114 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC3.12□□□□□ -1.91
APOBP04114 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
APOBP04114 THOC2-220ENST00000618150 3211 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
APOBP04114 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC3.11□□□□□ -1.91
APOBP04114 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC3.11□□□□□ -1.91
APOBP04114 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
APOBP04114 F5-201ENST00000367796 7039 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
APOBP04114 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
APOBP04114 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
APOBP04114 RNU1-59P-201ENST00000364829 162 ntBASIC3.11□□□□□ -1.91
APOBP04114 RNA5SP317-201ENST00000410176 116 ntBASIC3.11□□□□□ -1.91
APOBP04114 RNA5SP311-201ENST00000411290 116 ntBASIC3.11□□□□□ -1.91
APOBP04114 RNA5SP315-201ENST00000516340 116 ntBASIC3.11□□□□□ -1.91
APOBP04114 RNA5SP312-201ENST00000517068 116 ntBASIC3.11□□□□□ -1.91
APOBP04114 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC3.11□□□□□ -1.91
APOBP04114 AC019322.1-201ENST00000571869 389 ntBASIC3.11□□□□□ -1.91
APOBP04114 AL356608.1-201ENST00000610034 820 ntBASIC3.11□□□□□ -1.91
APOBP04114 U1.25-201ENST00000614085 162 ntBASIC3.11□□□□□ -1.91
APOBP04114 U1.34-201ENST00000618578 162 ntBASIC3.11□□□□□ -1.91
APOBP04114 U1.31-201ENST00000620022 160 ntBASIC3.11□□□□□ -1.91
APOBP04114 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
APOBP04114 ZNF518A-201ENST00000316045 7277 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
APOBP04114 ZRANB1-201ENST00000359653 5695 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
APOBP04114 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
APOBP04114 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
APOBP04114 UNC79-205ENST00000555664 8484 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
APOBP04114 TNFAIP8-206ENST00000504771 8681 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
APOBP04114 ERCC6-201ENST00000355832 8008 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
APOBP04114 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC3.11□□□□□ -1.91
APOBP04114 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC3.11□□□□□ -1.91
APOBP04114 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
APOBP04114 DNAH11-201ENST00000328843 13917 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
APOBP04114 AL161909.1-201ENST00000397390 712 ntBASIC3.11□□□□□ -1.91
APOBP04114 SLIT3-202ENST00000404867 8903 ntTSL 5 BASIC3.11□□□□□ -1.91
APOBP04114 AC124944.2-201ENST00000429866 1242 ntBASIC3.11□□□□□ -1.91
APOBP04114 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
APOBP04114 STARD4-AS1-201ENST00000500779 5525 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
APOBP04114 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC3.11□□□□□ -1.91
APOBP04114 NDUFB4P12-201ENST00000513465 390 ntBASIC3.11□□□□□ -1.91
APOBP04114 AP003080.1-202ENST00000526526 915 ntBASIC3.11□□□□□ -1.91
APOBP04114 AC024220.1-201ENST00000603675 484 ntBASIC3.11□□□□□ -1.91
APOBP04114 AC011626.1-201ENST00000604710 562 ntBASIC3.11□□□□□ -1.91
APOBP04114 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC3.11□□□□□ -1.91
APOBP04114 AC002044.3-201ENST00000623314 541 ntBASIC3.11□□□□□ -1.91
APOBP04114 RNA5SP196-201ENST00000625967 102 ntBASIC3.11□□□□□ -1.91
APOBP04114 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC3.11□□□□□ -1.91
APOBP04114 KIAA0100-201ENST00000389003 6852 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
APOBP04114 CTNND1-219ENST00000528621 5907 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
APOBP04114 AL355834.1-201ENST00000556602 3965 ntBASIC3.11□□□□□ -1.91
APOBP04114 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC3.11□□□□□ -1.91
APOBP04114 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
APOBP04114 CHCHD7-203ENST00000396723 1550 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
APOBP04114 MYT1L-202ENST00000399161 7063 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
APOBP04114 TAF1-201ENST00000276072 5692 ntAPPRIS P3 TSL 5 BASIC3.11□□□□□ -1.91
APOBP04114 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC3.11□□□□□ -1.91
APOBP04114 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC3.11□□□□□ -1.91
APOBP04114 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
APOBP04114 SLC12A1-202ENST00000380993 4707 ntAPPRIS P3 TSL 5 BASIC3.11□□□□□ -1.91
APOBP04114 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC3.11□□□□□ -1.91
APOBP04114 POC1B-AS1-201ENST00000605233 8041 ntTSL 2 BASIC3.11□□□□□ -1.91
APOBP04114 NSUN6-201ENST00000377304 2201 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
APOBP04114 NAV1-202ENST00000367296 13091 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
APOBP04114 AC107068.1-201ENST00000563286 4218 ntBASIC3.11□□□□□ -1.91
APOBP04114 DCN-218ENST00000551354 2924 ntTSL 3 BASIC3.11□□□□□ -1.91
APOBP04114 AL121657.1-201ENST00000327215 531 ntBASIC3.11□□□□□ -1.91
APOBP04114 ARL4AP5-201ENST00000404372 599 ntBASIC3.11□□□□□ -1.91
APOBP04114 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 88.8 ms