Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 REG1CP-201ENST00000377435 1705 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
PDGFAP04085 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
PDGFAP04085 AL450423.1-201ENST00000615176 1857 ntTSL 2 BASIC6.89□□□□□ -1.31
PDGFAP04085 LINC01206-202ENST00000474045 2240 ntTSL 5 BASIC6.89□□□□□ -1.31
PDGFAP04085 AC009318.1-201ENST00000553105 2380 ntTSL 2 BASIC6.89□□□□□ -1.31
PDGFAP04085 GABRB2-209ENST00000612710 2470 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
PDGFAP04085 BEST3-212ENST00000553096 2929 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
PDGFAP04085 AC135178.2-201ENST00000582471 3087 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
PDGFAP04085 SRGAP3-213ENST00000618999 3929 ntTSL 5 BASIC6.89□□□□□ -1.31
PDGFAP04085 CTNND1-216ENST00000527467 5071 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
PDGFAP04085 CTNND1-229ENST00000531014 5053 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
PDGFAP04085 IPCEF1-201ENST00000265198 6689 ntAPPRIS P3 TSL 1 (best) BASIC6.89□□□□□ -1.31
PDGFAP04085 PGM3-212ENST00000513973 6107 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
PDGFAP04085 SORBS1-212ENST00000371249 5927 ntAPPRIS P3 TSL 1 (best) BASIC6.88□□□□□ -1.31
PDGFAP04085 AKAP6-213ENST00000557354 5259 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
PDGFAP04085 AL161891.1-201ENST00000621575 4636 ntBASIC6.88□□□□□ -1.31
PDGFAP04085 BROX-201ENST00000340934 4124 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
PDGFAP04085 IL5RA-207ENST00000438560 2252 ntAPPRIS ALT2 TSL 2 BASIC6.88□□□□□ -1.31
PDGFAP04085 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC6.88□□□□□ -1.31
PDGFAP04085 AC242022.1-201ENST00000638002 1565 ntTSL 5 BASIC6.88□□□□□ -1.31
PDGFAP04085 MTND4P12-201ENST00000498999 1377 ntBASIC6.88□□□□□ -1.31
PDGFAP04085 TMSB4XP4-201ENST00000323496 618 ntBASIC6.88□□□□□ -1.31
PDGFAP04085 RN7SKP36-201ENST00000363997 312 ntBASIC6.88□□□□□ -1.31
PDGFAP04085 SNORA51.12-201ENST00000384448 134 ntBASIC6.88□□□□□ -1.31
PDGFAP04085 RNU6-1011P-201ENST00000384668 107 ntBASIC6.88□□□□□ -1.31
PDGFAP04085 AL034417.1-201ENST00000399343 800 ntBASIC6.88□□□□□ -1.31
PDGFAP04085 Y_RNA.598-201ENST00000410480 95 ntBASIC6.88□□□□□ -1.31
PDGFAP04085 RN7SKP222-201ENST00000410651 315 ntBASIC6.88□□□□□ -1.31
PDGFAP04085 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC6.88□□□□□ -1.31
PDGFAP04085 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC6.88□□□□□ -1.31
PDGFAP04085 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC6.88□□□□□ -1.31
PDGFAP04085 AC009237.5-201ENST00000414271 501 ntBASIC6.88□□□□□ -1.31
PDGFAP04085 AC134879.1-201ENST00000426062 394 ntBASIC6.88□□□□□ -1.31
PDGFAP04085 TRIM60P3Y-201ENST00000432201 673 ntBASIC6.88□□□□□ -1.31
PDGFAP04085 TXNP5-201ENST00000441043 315 ntBASIC6.88□□□□□ -1.31
PDGFAP04085 AC123904.1-201ENST00000441072 368 ntBASIC6.88□□□□□ -1.31
PDGFAP04085 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC6.88□□□□□ -1.31
PDGFAP04085 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC6.88□□□□□ -1.31
PDGFAP04085 AC015724.1-201ENST00000478577 156 ntBASIC6.88□□□□□ -1.31
PDGFAP04085 AC099521.1-201ENST00000482557 334 ntBASIC6.88□□□□□ -1.31
PDGFAP04085 AC079594.1-201ENST00000489757 331 ntBASIC6.88□□□□□ -1.31
PDGFAP04085 OR5H5P-201ENST00000503164 928 ntBASIC6.88□□□□□ -1.31
PDGFAP04085 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC6.88□□□□□ -1.31
PDGFAP04085 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC6.88□□□□□ -1.31
PDGFAP04085 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC6.88□□□□□ -1.31
PDGFAP04085 AC090835.1-201ENST00000515189 1024 ntBASIC6.88□□□□□ -1.31
PDGFAP04085 PSD2-AS1-201ENST00000515306 412 ntTSL 3 BASIC6.88□□□□□ -1.31
PDGFAP04085 RNU6-507P-201ENST00000516045 100 ntBASIC6.88□□□□□ -1.31
PDGFAP04085 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC6.88□□□□□ -1.31
PDGFAP04085 MINCR-206ENST00000524335 499 ntTSL 2 BASIC6.88□□□□□ -1.31
PDGFAP04085 AL355075.1-201ENST00000528210 468 ntTSL 2 BASIC6.88□□□□□ -1.31
PDGFAP04085 AC104383.1-201ENST00000530297 370 ntBASIC6.88□□□□□ -1.31
PDGFAP04085 AC090673.2-201ENST00000544279 454 ntTSL 3 BASIC6.88□□□□□ -1.31
PDGFAP04085 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC6.88□□□□□ -1.31
PDGFAP04085 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC6.88□□□□□ -1.31
PDGFAP04085 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC6.88□□□□□ -1.31
PDGFAP04085 RPARP-AS1-204ENST00000594818 445 ntTSL 3 BASIC6.88□□□□□ -1.31
PDGFAP04085 AC016629.2-201ENST00000597341 199 ntBASIC6.88□□□□□ -1.31
PDGFAP04085 AL390208.1-201ENST00000605885 644 ntBASIC6.88□□□□□ -1.31
PDGFAP04085 AL591686.2-201ENST00000608241 475 ntTSL 4 BASIC6.88□□□□□ -1.31
PDGFAP04085 OR8G7P-201ENST00000616658 848 ntBASIC6.88□□□□□ -1.31
PDGFAP04085 AC104260.1-201ENST00000616660 539 ntBASIC6.88□□□□□ -1.31
PDGFAP04085 AC002553.4-201ENST00000616896 331 ntBASIC6.88□□□□□ -1.31
PDGFAP04085 AC126175.1-201ENST00000617041 758 ntBASIC6.88□□□□□ -1.31
PDGFAP04085 AC244100.1-201ENST00000618141 407 ntTSL 5 BASIC6.88□□□□□ -1.31
PDGFAP04085 AC233280.20-201ENST00000637412 416 ntBASIC6.88□□□□□ -1.31
PDGFAP04085 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC6.88□□□□□ -1.31
PDGFAP04085 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC6.88□□□□□ -1.31
PDGFAP04085 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC6.88□□□□□ -1.31
PDGFAP04085 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
PDGFAP04085 SLA-201ENST00000338087 3451 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
PDGFAP04085 DAZ3-201ENST00000315357 3277 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
PDGFAP04085 DAZ2-201ENST00000382294 3277 ntAPPRIS ALT2 TSL 5 BASIC6.88□□□□□ -1.31
PDGFAP04085 DAZ4-204ENST00000415508 3277 ntTSL 5 BASIC6.88□□□□□ -1.31
PDGFAP04085 ST18-201ENST00000276480 6187 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
PDGFAP04085 EML5-201ENST00000380664 5910 ntTSL 5 BASIC6.88□□□□□ -1.31
PDGFAP04085 PDGFC-203ENST00000502773 4165 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
PDGFAP04085 FKTN-202ENST00000357998 2404 ntTSL 5 BASIC6.88□□□□□ -1.31
PDGFAP04085 CTAGE3P-201ENST00000454280 2404 ntBASIC6.88□□□□□ -1.31
PDGFAP04085 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC6.88□□□□□ -1.31
PDGFAP04085 CYP19A1-202ENST00000396404 2388 ntAPPRIS P1 TSL 2 BASIC6.88□□□□□ -1.31
PDGFAP04085 PDZD2-202ENST00000438447 11704 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
PDGFAP04085 DDX46-201ENST00000354283 3821 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
PDGFAP04085 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC6.88□□□□□ -1.31
PDGFAP04085 ELMO2-203ENST00000372176 3678 ntTSL 5 BASIC6.88□□□□□ -1.31
PDGFAP04085 ANK2-215ENST00000509550 3638 ntTSL 2 BASIC6.88□□□□□ -1.31
PDGFAP04085 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC6.88□□□□□ -1.31
PDGFAP04085 UGT2B4-201ENST00000305107 2103 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
PDGFAP04085 FOPNL-206ENST00000573968 2039 ntTSL 2 BASIC6.88□□□□□ -1.31
PDGFAP04085 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
PDGFAP04085 PRDM2-201ENST00000235372 7957 ntAPPRIS P4 TSL 1 (best) BASIC6.87□□□□□ -1.31
PDGFAP04085 HEPH-201ENST00000336279 4228 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
PDGFAP04085 ZKSCAN5-201ENST00000326775 4178 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
PDGFAP04085 SLC17A8-201ENST00000323346 3983 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
PDGFAP04085 KLF7-201ENST00000309446 8362 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
PDGFAP04085 CHRM5-202ENST00000557872 2687 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
PDGFAP04085 FZD3-204ENST00000537916 13740 ntAPPRIS P1 TSL 2 BASIC6.87□□□□□ -1.31
PDGFAP04085 BCLAF1-223ENST00000628517 2512 ntTSL 5 BASIC6.87□□□□□ -1.31
PDGFAP04085 ORC3-206ENST00000546266 2470 ntTSL 2 BASIC6.87□□□□□ -1.31
PDGFAP04085 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC6.87□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms