Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 LARS-201ENST00000274562 2213 ntTSL 2 BASIC6.28□□□□□ -1.4
COL1A1P02452 RNA5SP455-201ENST00000365190 119 ntBASIC6.28□□□□□ -1.4
COL1A1P02452 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
COL1A1P02452 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC6.28□□□□□ -1.4
COL1A1P02452 EIF2S2P3-201ENST00000428356 999 ntBASIC6.28□□□□□ -1.4
COL1A1P02452 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC6.28□□□□□ -1.4
COL1A1P02452 AL513533.1-201ENST00000453728 415 ntBASIC6.28□□□□□ -1.4
COL1A1P02452 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC6.28□□□□□ -1.4
COL1A1P02452 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
COL1A1P02452 AC097173.1-201ENST00000505862 819 ntBASIC6.28□□□□□ -1.4
COL1A1P02452 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC6.28□□□□□ -1.4
COL1A1P02452 RN7SKP260-201ENST00000516907 149 ntBASIC6.28□□□□□ -1.4
COL1A1P02452 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
COL1A1P02452 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC6.28□□□□□ -1.4
COL1A1P02452 AL162431.4-201ENST00000604674 411 ntBASIC6.28□□□□□ -1.4
COL1A1P02452 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC6.27□□□□□ -1.41
COL1A1P02452 MAPK6PS2-201ENST00000379571 2060 ntBASIC6.27□□□□□ -1.41
COL1A1P02452 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
COL1A1P02452 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
COL1A1P02452 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC6.27□□□□□ -1.41
COL1A1P02452 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
COL1A1P02452 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
COL1A1P02452 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC6.27□□□□□ -1.41
COL1A1P02452 Z95114.1-201ENST00000624264 14574 ntBASIC6.27□□□□□ -1.41
COL1A1P02452 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC6.27□□□□□ -1.41
COL1A1P02452 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC6.27□□□□□ -1.41
COL1A1P02452 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC6.27□□□□□ -1.41
COL1A1P02452 CASC19-221ENST00000641309 1382 ntBASIC6.27□□□□□ -1.41
COL1A1P02452 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC6.27□□□□□ -1.41
COL1A1P02452 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
COL1A1P02452 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC6.27□□□□□ -1.41
COL1A1P02452 MIR600-201ENST00000385007 98 ntBASIC6.27□□□□□ -1.41
COL1A1P02452 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC6.27□□□□□ -1.41
COL1A1P02452 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC6.27□□□□□ -1.41
COL1A1P02452 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC6.27□□□□□ -1.41
COL1A1P02452 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
COL1A1P02452 AC090804.1-201ENST00000448870 490 ntBASIC6.27□□□□□ -1.41
COL1A1P02452 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC6.27□□□□□ -1.41
COL1A1P02452 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC6.27□□□□□ -1.41
COL1A1P02452 GLUD1P3-202ENST00000508551 200 ntBASIC6.27□□□□□ -1.41
COL1A1P02452 RNA5SP43-201ENST00000516559 110 ntBASIC6.27□□□□□ -1.41
COL1A1P02452 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC6.27□□□□□ -1.41
COL1A1P02452 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC6.27□□□□□ -1.41
COL1A1P02452 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC6.27□□□□□ -1.41
COL1A1P02452 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC6.27□□□□□ -1.41
COL1A1P02452 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC6.27□□□□□ -1.41
COL1A1P02452 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
COL1A1P02452 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC6.27□□□□□ -1.41
COL1A1P02452 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC6.26□□□□□ -1.41
COL1A1P02452 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
COL1A1P02452 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
COL1A1P02452 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC6.26□□□□□ -1.41
COL1A1P02452 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC6.26□□□□□ -1.41
COL1A1P02452 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC6.26□□□□□ -1.41
COL1A1P02452 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC6.26□□□□□ -1.41
COL1A1P02452 AC006210.2-201ENST00000367074 1545 ntBASIC6.26□□□□□ -1.41
COL1A1P02452 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
COL1A1P02452 RNU1-74P-201ENST00000384108 171 ntBASIC6.26□□□□□ -1.41
COL1A1P02452 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC6.26□□□□□ -1.41
COL1A1P02452 RN7SKP114-201ENST00000410327 279 ntBASIC6.26□□□□□ -1.41
COL1A1P02452 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
COL1A1P02452 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
COL1A1P02452 AC093414.1-201ENST00000434712 514 ntBASIC6.26□□□□□ -1.41
COL1A1P02452 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC6.26□□□□□ -1.41
COL1A1P02452 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC6.26□□□□□ -1.41
COL1A1P02452 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC6.26□□□□□ -1.41
COL1A1P02452 HNRNPDLP2-201ENST00000455248 751 ntBASIC6.26□□□□□ -1.41
COL1A1P02452 snoU13.20-201ENST00000459180 104 ntBASIC6.26□□□□□ -1.41
COL1A1P02452 AC012400.1-201ENST00000518452 381 ntBASIC6.26□□□□□ -1.41
COL1A1P02452 AC021006.3-201ENST00000530771 192 ntBASIC6.26□□□□□ -1.41
COL1A1P02452 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC6.26□□□□□ -1.41
COL1A1P02452 RPL27-207ENST00000590864 569 ntTSL 2 BASIC6.26□□□□□ -1.41
COL1A1P02452 PHLPP2-201ENST00000393524 8467 ntTSL 2 BASIC6.26□□□□□ -1.41
COL1A1P02452 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
COL1A1P02452 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC6.26□□□□□ -1.41
COL1A1P02452 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
COL1A1P02452 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
COL1A1P02452 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
COL1A1P02452 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
COL1A1P02452 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
COL1A1P02452 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
COL1A1P02452 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
COL1A1P02452 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
COL1A1P02452 AC079298.1-201ENST00000625026 1619 ntBASIC6.25□□□□□ -1.41
COL1A1P02452 DMD-205ENST00000359836 7339 ntTSL 5 BASIC6.25□□□□□ -1.41
COL1A1P02452 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC6.25□□□□□ -1.41
COL1A1P02452 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
COL1A1P02452 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
COL1A1P02452 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC6.25□□□□□ -1.41
COL1A1P02452 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
COL1A1P02452 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
COL1A1P02452 RNA5SP428-201ENST00000365129 132 ntBASIC6.25□□□□□ -1.41
COL1A1P02452 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC6.25□□□□□ -1.41
COL1A1P02452 SNORA70.6-201ENST00000383934 134 ntBASIC6.25□□□□□ -1.41
COL1A1P02452 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC6.25□□□□□ -1.41
COL1A1P02452 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
COL1A1P02452 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC6.25□□□□□ -1.41
COL1A1P02452 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC6.25□□□□□ -1.41
COL1A1P02452 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC6.25□□□□□ -1.41
COL1A1P02452 AC096741.1-201ENST00000472250 846 ntBASIC6.25□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms