Protein–RNA interactions for Protein: O75351

VPS4B, Vacuolar protein sorting-associated protein 4B, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4BO75351 RPS27P5-201ENST00000444247 244 ntBASIC5.93□□□□□ -1.46
VPS4BO75351 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC5.93□□□□□ -1.46
VPS4BO75351 AC073109.1-201ENST00000445066 978 ntBASIC5.93□□□□□ -1.46
VPS4BO75351 KRTAP2-5P-201ENST00000446109 396 ntBASIC5.93□□□□□ -1.46
VPS4BO75351 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC5.93□□□□□ -1.46
VPS4BO75351 OSTCP1-201ENST00000455507 450 ntBASIC5.93□□□□□ -1.46
VPS4BO75351 RPL12P31-201ENST00000478433 450 ntBASIC5.93□□□□□ -1.46
VPS4BO75351 COX6B1P2-201ENST00000489624 230 ntBASIC5.93□□□□□ -1.46
VPS4BO75351 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC5.93□□□□□ -1.46
VPS4BO75351 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
VPS4BO75351 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC5.93□□□□□ -1.46
VPS4BO75351 MTCYBP35-201ENST00000503630 1137 ntBASIC5.93□□□□□ -1.46
VPS4BO75351 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC5.93□□□□□ -1.46
VPS4BO75351 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC5.93□□□□□ -1.46
VPS4BO75351 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC5.93□□□□□ -1.46
VPS4BO75351 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC5.93□□□□□ -1.46
VPS4BO75351 IGHVIII-47-1-201ENST00000518187 331 ntBASIC5.93□□□□□ -1.46
VPS4BO75351 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC5.93□□□□□ -1.46
VPS4BO75351 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
VPS4BO75351 AC092865.1-201ENST00000544395 1023 ntBASIC5.93□□□□□ -1.46
VPS4BO75351 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
VPS4BO75351 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
VPS4BO75351 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC5.93□□□□□ -1.46
VPS4BO75351 AC005412.1-201ENST00000580812 1049 ntBASIC5.93□□□□□ -1.46
VPS4BO75351 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC5.93□□□□□ -1.46
VPS4BO75351 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
VPS4BO75351 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC5.93□□□□□ -1.46
VPS4BO75351 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC5.93□□□□□ -1.46
VPS4BO75351 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC5.93□□□□□ -1.46
VPS4BO75351 SNX6P1-201ENST00000601728 1224 ntBASIC5.93□□□□□ -1.46
VPS4BO75351 AC100767.2-201ENST00000604840 693 ntBASIC5.93□□□□□ -1.46
VPS4BO75351 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC5.93□□□□□ -1.46
VPS4BO75351 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
VPS4BO75351 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC5.93□□□□□ -1.46
VPS4BO75351 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC5.93□□□□□ -1.46
VPS4BO75351 MIR6826-201ENST00000617808 98 ntBASIC5.93□□□□□ -1.46
VPS4BO75351 AC008115.4-201ENST00000619780 775 ntBASIC5.93□□□□□ -1.46
VPS4BO75351 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC5.93□□□□□ -1.46
VPS4BO75351 DRG1-207ENST00000629688 309 ntTSL 5 BASIC5.93□□□□□ -1.46
VPS4BO75351 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
VPS4BO75351 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC5.93□□□□□ -1.46
VPS4BO75351 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC5.93□□□□□ -1.46
VPS4BO75351 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
VPS4BO75351 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
VPS4BO75351 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.93□□□□□ -1.46
VPS4BO75351 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
VPS4BO75351 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
VPS4BO75351 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
VPS4BO75351 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
VPS4BO75351 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC5.93□□□□□ -1.46
VPS4BO75351 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
VPS4BO75351 OFD1P15Y-201ENST00000411536 1392 ntBASIC5.93□□□□□ -1.46
VPS4BO75351 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC5.93□□□□□ -1.46
VPS4BO75351 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
VPS4BO75351 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
VPS4BO75351 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.92□□□□□ -1.46
VPS4BO75351 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC5.92□□□□□ -1.46
VPS4BO75351 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
VPS4BO75351 AC093297.3-201ENST00000607056 2517 ntBASIC5.92□□□□□ -1.46
VPS4BO75351 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC5.92□□□□□ -1.46
VPS4BO75351 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
VPS4BO75351 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
VPS4BO75351 HSPD1P7-201ENST00000447985 1686 ntBASIC5.92□□□□□ -1.46
VPS4BO75351 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
VPS4BO75351 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC5.92□□□□□ -1.46
VPS4BO75351 RN7SKP128-201ENST00000364270 303 ntBASIC5.92□□□□□ -1.46
VPS4BO75351 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
VPS4BO75351 RNU11-201ENST00000387069 134 ntBASIC5.92□□□□□ -1.46
VPS4BO75351 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
VPS4BO75351 TAS2R15P-201ENST00000390674 928 ntBASIC5.92□□□□□ -1.46
VPS4BO75351 NACAP7-201ENST00000407371 609 ntBASIC5.92□□□□□ -1.46
VPS4BO75351 RNU2-17P-201ENST00000410290 190 ntBASIC5.92□□□□□ -1.46
VPS4BO75351 CDY17P-201ENST00000414121 1282 ntBASIC5.92□□□□□ -1.46
VPS4BO75351 AC107081.1-201ENST00000414975 361 ntBASIC5.92□□□□□ -1.46
VPS4BO75351 Z93019.1-201ENST00000416450 973 ntBASIC5.92□□□□□ -1.46
VPS4BO75351 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC5.92□□□□□ -1.46
VPS4BO75351 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC5.92□□□□□ -1.46
VPS4BO75351 AC066692.1-201ENST00000421721 457 ntBASIC5.92□□□□□ -1.46
VPS4BO75351 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC5.92□□□□□ -1.46
VPS4BO75351 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC5.92□□□□□ -1.46
VPS4BO75351 CDY8P-201ENST00000428380 1279 ntBASIC5.92□□□□□ -1.46
VPS4BO75351 USP24P1-201ENST00000433802 779 ntBASIC5.92□□□□□ -1.46
VPS4BO75351 RPL23AP19-201ENST00000436229 369 ntBASIC5.92□□□□□ -1.46
VPS4BO75351 CXCR2P1-202ENST00000443392 1074 ntBASIC5.92□□□□□ -1.46
VPS4BO75351 CUBNP2-201ENST00000443534 1139 ntBASIC5.92□□□□□ -1.46
VPS4BO75351 CDY20P-201ENST00000447528 1279 ntBASIC5.92□□□□□ -1.46
VPS4BO75351 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC5.92□□□□□ -1.46
VPS4BO75351 PPIAP27-201ENST00000453800 265 ntBASIC5.92□□□□□ -1.46
VPS4BO75351 AC110749.1-201ENST00000462007 357 ntBASIC5.92□□□□□ -1.46
VPS4BO75351 AC023194.2-201ENST00000465398 406 ntBASIC5.92□□□□□ -1.46
VPS4BO75351 AC098847.1-201ENST00000473094 348 ntBASIC5.92□□□□□ -1.46
VPS4BO75351 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC5.92□□□□□ -1.46
VPS4BO75351 RPL7L1P4-201ENST00000513004 707 ntBASIC5.92□□□□□ -1.46
VPS4BO75351 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC5.92□□□□□ -1.46
VPS4BO75351 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC5.92□□□□□ -1.46
VPS4BO75351 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC5.92□□□□□ -1.46
VPS4BO75351 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC5.92□□□□□ -1.46
VPS4BO75351 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC5.92□□□□□ -1.46
VPS4BO75351 MTATP6P15-201ENST00000527233 835 ntBASIC5.92□□□□□ -1.46
VPS4BO75351 AC244502.2-201ENST00000543361 851 ntBASIC5.92□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 11.9 ms