Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
CHD2O14647 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
CHD2O14647 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC7.17□□□□□ -1.26
CHD2O14647 IL22RA2-203ENST00000349184 2801 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
CHD2O14647 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC7.17□□□□□ -1.26
CHD2O14647 TRPS1-203ENST00000395715 9990 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
CHD2O14647 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC7.17□□□□□ -1.26
CHD2O14647 AP000547.3-204ENST00000588548 2523 ntBASIC7.17□□□□□ -1.26
CHD2O14647 ERC1-204ENST00000397203 9118 ntTSL 5 BASIC7.17□□□□□ -1.26
CHD2O14647 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
CHD2O14647 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
CHD2O14647 SNORA77-201ENST00000408716 125 ntBASIC7.17□□□□□ -1.26
CHD2O14647 RN7SKP27-201ENST00000410684 333 ntBASIC7.17□□□□□ -1.26
CHD2O14647 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
CHD2O14647 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC7.17□□□□□ -1.26
CHD2O14647 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC7.17□□□□□ -1.26
CHD2O14647 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC7.17□□□□□ -1.26
CHD2O14647 snoU13.1-201ENST00000459157 104 ntBASIC7.17□□□□□ -1.26
CHD2O14647 RN7SL41P-201ENST00000476144 297 ntBASIC7.17□□□□□ -1.26
CHD2O14647 NIP7P2-201ENST00000485801 544 ntBASIC7.17□□□□□ -1.26
CHD2O14647 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC7.17□□□□□ -1.26
CHD2O14647 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC7.17□□□□□ -1.26
CHD2O14647 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
CHD2O14647 AP001357.1-201ENST00000586304 1053 ntBASIC7.17□□□□□ -1.26
CHD2O14647 MLECP1-201ENST00000615893 709 ntBASIC7.17□□□□□ -1.26
CHD2O14647 AL121873.1-201ENST00000616013 524 ntBASIC7.17□□□□□ -1.26
CHD2O14647 ST8SIA5-203ENST00000538168 13761 ntTSL 2 BASIC7.17□□□□□ -1.26
CHD2O14647 PLXNA4-201ENST00000321063 13061 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
CHD2O14647 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
CHD2O14647 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC7.17□□□□□ -1.26
CHD2O14647 AC079097.1-201ENST00000512187 1399 ntBASIC7.16□□□□□ -1.26
CHD2O14647 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC7.16□□□□□ -1.26
CHD2O14647 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
CHD2O14647 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC7.16□□□□□ -1.26
CHD2O14647 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC7.16□□□□□ -1.26
CHD2O14647 SH3D19-210ENST00000514152 5107 ntAPPRIS ALT1 TSL 2 BASIC7.16□□□□□ -1.26
CHD2O14647 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC7.16□□□□□ -1.26
CHD2O14647 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
CHD2O14647 AC124944.2-201ENST00000429866 1242 ntBASIC7.16□□□□□ -1.26
CHD2O14647 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC7.16□□□□□ -1.26
CHD2O14647 ATP5A1P7-201ENST00000453978 1279 ntBASIC7.16□□□□□ -1.26
CHD2O14647 AURKAPS2-201ENST00000454983 333 ntBASIC7.16□□□□□ -1.26
CHD2O14647 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
CHD2O14647 AC083829.1-201ENST00000503756 657 ntBASIC7.16□□□□□ -1.26
CHD2O14647 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
CHD2O14647 AC020910.3-201ENST00000603701 874 ntBASIC7.16□□□□□ -1.26
CHD2O14647 AL592148.3-201ENST00000608771 2646 ntBASIC7.16□□□□□ -1.26
CHD2O14647 AL137100.1-201ENST00000556703 1620 ntBASIC7.16□□□□□ -1.26
CHD2O14647 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC7.16□□□□□ -1.26
CHD2O14647 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
CHD2O14647 JPX-212ENST00000639185 9658 ntTSL 5 BASIC7.16□□□□□ -1.26
CHD2O14647 AC139713.2-214ENST00000642059 1811 ntBASIC7.16□□□□□ -1.26
CHD2O14647 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
CHD2O14647 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC7.15□□□□□ -1.26
CHD2O14647 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
CHD2O14647 BX510359.2-201ENST00000417920 305 ntBASIC7.15□□□□□ -1.26
CHD2O14647 PPIAP21-201ENST00000464473 501 ntBASIC7.15□□□□□ -1.26
CHD2O14647 AC111000.3-201ENST00000508057 576 ntBASIC7.15□□□□□ -1.26
CHD2O14647 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
CHD2O14647 AC012339.2-201ENST00000523996 453 ntBASIC7.15□□□□□ -1.26
CHD2O14647 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC7.15□□□□□ -1.26
CHD2O14647 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC7.15□□□□□ -1.26
CHD2O14647 AC060780.2-201ENST00000589047 198 ntBASIC7.15□□□□□ -1.26
CHD2O14647 AL445423.1-201ENST00000609941 536 ntBASIC7.15□□□□□ -1.26
CHD2O14647 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC7.15□□□□□ -1.26
CHD2O14647 AC135068.12-201ENST00000637370 931 ntBASIC7.15□□□□□ -1.26
CHD2O14647 ZFP42-201ENST00000326866 2651 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
CHD2O14647 RTL9-201ENST00000465301 5426 ntAPPRIS P2 TSL 1 (best) BASIC7.15□□□□□ -1.26
CHD2O14647 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
CHD2O14647 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC7.15□□□□□ -1.27
CHD2O14647 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC7.15□□□□□ -1.27
CHD2O14647 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
CHD2O14647 RPL7P41-201ENST00000485823 957 ntBASIC7.15□□□□□ -1.27
CHD2O14647 SCARNA22-201ENST00000503991 125 ntBASIC7.15□□□□□ -1.27
CHD2O14647 OR5M2P-201ENST00000529003 936 ntBASIC7.15□□□□□ -1.27
CHD2O14647 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.27
CHD2O14647 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC7.15□□□□□ -1.27
CHD2O14647 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC7.15□□□□□ -1.27
CHD2O14647 AP001521.2-201ENST00000608772 546 ntBASIC7.15□□□□□ -1.27
CHD2O14647 IFNG-AS1-202ENST00000538665 1791 ntTSL 2 BASIC7.15□□□□□ -1.27
CHD2O14647 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC7.15□□□□□ -1.27
CHD2O14647 ZNF407-203ENST00000577538 5794 ntAPPRIS ALT2 TSL 2 BASIC7.14□□□□□ -1.27
CHD2O14647 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
CHD2O14647 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
CHD2O14647 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC7.14□□□□□ -1.27
CHD2O14647 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
CHD2O14647 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
CHD2O14647 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC7.14□□□□□ -1.27
CHD2O14647 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC7.14□□□□□ -1.27
CHD2O14647 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC7.14□□□□□ -1.27
CHD2O14647 AC239367.2-201ENST00000447309 705 ntBASIC7.14□□□□□ -1.27
CHD2O14647 IGHV5-78-201ENST00000450948 295 ntBASIC7.14□□□□□ -1.27
CHD2O14647 RPL10P17-201ENST00000453852 316 ntBASIC7.14□□□□□ -1.27
CHD2O14647 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC7.14□□□□□ -1.27
CHD2O14647 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC7.14□□□□□ -1.27
CHD2O14647 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC7.14□□□□□ -1.27
CHD2O14647 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC7.14□□□□□ -1.27
CHD2O14647 RN7SKP276-201ENST00000516242 268 ntBASIC7.14□□□□□ -1.27
CHD2O14647 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC7.14□□□□□ -1.27
CHD2O14647 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC7.14□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 93.6 ms