Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 AL138974.1-201ENST00000551227 741 ntTSL 5 BASIC5.63□□□□□ -1.51
TCRBV7S3A2A0A539 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC5.63□□□□□ -1.51
TCRBV7S3A2A0A539 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC5.63□□□□□ -1.51
TCRBV7S3A2A0A539 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.63□□□□□ -1.51
TCRBV7S3A2A0A539 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC5.63□□□□□ -1.51
TCRBV7S3A2A0A539 AC018690.1-201ENST00000608144 626 ntBASIC5.63□□□□□ -1.51
TCRBV7S3A2A0A539 Six3os1_2.1-201ENST00000616963 217 ntBASIC5.63□□□□□ -1.51
TCRBV7S3A2A0A539 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC5.63□□□□□ -1.51
TCRBV7S3A2A0A539 AC009452.1-201ENST00000640823 606 ntBASIC5.63□□□□□ -1.51
TCRBV7S3A2A0A539 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
TCRBV7S3A2A0A539 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
TCRBV7S3A2A0A539 AL356317.1-201ENST00000396110 1436 ntBASIC5.63□□□□□ -1.51
TCRBV7S3A2A0A539 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
TCRBV7S3A2A0A539 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.62□□□□□ -1.51
TCRBV7S3A2A0A539 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
TCRBV7S3A2A0A539 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
TCRBV7S3A2A0A539 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
TCRBV7S3A2A0A539 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC5.62□□□□□ -1.51
TCRBV7S3A2A0A539 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.62□□□□□ -1.51
TCRBV7S3A2A0A539 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
TCRBV7S3A2A0A539 HMGB1P20-201ENST00000402555 677 ntBASIC5.62□□□□□ -1.51
TCRBV7S3A2A0A539 STAT4-203ENST00000409995 709 ntTSL 5 BASIC5.62□□□□□ -1.51
TCRBV7S3A2A0A539 RMRPP5-201ENST00000411156 267 ntBASIC5.62□□□□□ -1.51
TCRBV7S3A2A0A539 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC5.62□□□□□ -1.51
TCRBV7S3A2A0A539 HYALP1-201ENST00000417674 1279 ntBASIC5.62□□□□□ -1.51
TCRBV7S3A2A0A539 MTCO2P1-201ENST00000424648 477 ntBASIC5.62□□□□□ -1.51
TCRBV7S3A2A0A539 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC5.62□□□□□ -1.51
TCRBV7S3A2A0A539 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
TCRBV7S3A2A0A539 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC5.62□□□□□ -1.51
TCRBV7S3A2A0A539 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC5.62□□□□□ -1.51
TCRBV7S3A2A0A539 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC5.62□□□□□ -1.51
TCRBV7S3A2A0A539 RPL5P25-201ENST00000441148 775 ntBASIC5.62□□□□□ -1.51
TCRBV7S3A2A0A539 HMGN1P5-201ENST00000448591 263 ntBASIC5.62□□□□□ -1.51
TCRBV7S3A2A0A539 MTATP6P14-201ENST00000455189 673 ntBASIC5.62□□□□□ -1.51
TCRBV7S3A2A0A539 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC5.62□□□□□ -1.51
TCRBV7S3A2A0A539 AC060775.1-201ENST00000518241 520 ntBASIC5.62□□□□□ -1.51
TCRBV7S3A2A0A539 IGKV2-4-201ENST00000523070 340 ntBASIC5.62□□□□□ -1.51
TCRBV7S3A2A0A539 C1DP5-201ENST00000525775 383 ntBASIC5.62□□□□□ -1.51
TCRBV7S3A2A0A539 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC5.62□□□□□ -1.51
TCRBV7S3A2A0A539 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC5.62□□□□□ -1.51
TCRBV7S3A2A0A539 C1GALT1P1-201ENST00000548895 1089 ntBASIC5.62□□□□□ -1.51
TCRBV7S3A2A0A539 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC5.62□□□□□ -1.51
TCRBV7S3A2A0A539 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC5.62□□□□□ -1.51
TCRBV7S3A2A0A539 OR11H3P-201ENST00000554547 982 ntBASIC5.62□□□□□ -1.51
TCRBV7S3A2A0A539 AC023158.1-201ENST00000561632 1025 ntBASIC5.62□□□□□ -1.51
TCRBV7S3A2A0A539 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
TCRBV7S3A2A0A539 AP005403.1-201ENST00000579720 229 ntBASIC5.62□□□□□ -1.51
TCRBV7S3A2A0A539 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC5.62□□□□□ -1.51
TCRBV7S3A2A0A539 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
TCRBV7S3A2A0A539 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
TCRBV7S3A2A0A539 AC009779.8-202ENST00000607990 932 ntBASIC5.62□□□□□ -1.51
TCRBV7S3A2A0A539 AC090912.3-201ENST00000609775 533 ntBASIC5.62□□□□□ -1.51
TCRBV7S3A2A0A539 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
TCRBV7S3A2A0A539 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC5.62□□□□□ -1.51
TCRBV7S3A2A0A539 AC135068.5-201ENST00000624197 983 ntBASIC5.62□□□□□ -1.51
TCRBV7S3A2A0A539 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC5.62□□□□□ -1.51
TCRBV7S3A2A0A539 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC5.62□□□□□ -1.51
TCRBV7S3A2A0A539 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.62□□□□□ -1.51
TCRBV7S3A2A0A539 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
TCRBV7S3A2A0A539 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
TCRBV7S3A2A0A539 AL137141.1-201ENST00000624622 4836 ntBASIC5.62□□□□□ -1.51
TCRBV7S3A2A0A539 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
TCRBV7S3A2A0A539 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
TCRBV7S3A2A0A539 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.62□□□□□ -1.51
TCRBV7S3A2A0A539 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
TCRBV7S3A2A0A539 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
TCRBV7S3A2A0A539 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
TCRBV7S3A2A0A539 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
TCRBV7S3A2A0A539 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
TCRBV7S3A2A0A539 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
TCRBV7S3A2A0A539 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
TCRBV7S3A2A0A539 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
TCRBV7S3A2A0A539 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.61□□□□□ -1.51
TCRBV7S3A2A0A539 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
TCRBV7S3A2A0A539 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
TCRBV7S3A2A0A539 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
TCRBV7S3A2A0A539 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
TCRBV7S3A2A0A539 OR7E156P-201ENST00000400303 464 ntBASIC5.61□□□□□ -1.51
TCRBV7S3A2A0A539 LYPLA1P3-201ENST00000402650 695 ntBASIC5.61□□□□□ -1.51
TCRBV7S3A2A0A539 UBE2F-204ENST00000409953 924 ntTSL 3 BASIC5.61□□□□□ -1.51
TCRBV7S3A2A0A539 EEF1A1P29-201ENST00000416082 1096 ntBASIC5.61□□□□□ -1.51
TCRBV7S3A2A0A539 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
TCRBV7S3A2A0A539 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC5.61□□□□□ -1.51
TCRBV7S3A2A0A539 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC5.61□□□□□ -1.51
TCRBV7S3A2A0A539 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
TCRBV7S3A2A0A539 CLNS1AP1-201ENST00000435954 682 ntBASIC5.61□□□□□ -1.51
TCRBV7S3A2A0A539 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC5.61□□□□□ -1.51
TCRBV7S3A2A0A539 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.61□□□□□ -1.51
TCRBV7S3A2A0A539 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC5.61□□□□□ -1.51
TCRBV7S3A2A0A539 AL627224.1-201ENST00000448334 444 ntBASIC5.61□□□□□ -1.51
TCRBV7S3A2A0A539 AP006222.1-205ENST00000450734 457 ntBASIC5.61□□□□□ -1.51
TCRBV7S3A2A0A539 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.61□□□□□ -1.51
TCRBV7S3A2A0A539 ACA64.1-201ENST00000459171 127 ntBASIC5.61□□□□□ -1.51
TCRBV7S3A2A0A539 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC5.61□□□□□ -1.51
TCRBV7S3A2A0A539 AC087672.1-201ENST00000479876 766 ntBASIC5.61□□□□□ -1.51
TCRBV7S3A2A0A539 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC5.61□□□□□ -1.51
TCRBV7S3A2A0A539 RN7SL205P-201ENST00000490174 284 ntBASIC5.61□□□□□ -1.51
TCRBV7S3A2A0A539 IGBP1P4-201ENST00000503202 879 ntBASIC5.61□□□□□ -1.51
TCRBV7S3A2A0A539 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC5.61□□□□□ -1.51
TCRBV7S3A2A0A539 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms