Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
HLA-DRB4X5D2U9 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
HLA-DRB4X5D2U9 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
HLA-DRB4X5D2U9 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
HLA-DRB4X5D2U9 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
HLA-DRB4X5D2U9 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
HLA-DRB4X5D2U9 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
HLA-DRB4X5D2U9 RN7SKP28-201ENST00000364770 305 ntBASIC4.08□□□□□ -1.76
HLA-DRB4X5D2U9 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
HLA-DRB4X5D2U9 CDC123-202ENST00000378900 933 ntTSL 5 BASIC4.08□□□□□ -1.76
HLA-DRB4X5D2U9 MAPK6PS2-201ENST00000379571 2060 ntBASIC4.08□□□□□ -1.76
HLA-DRB4X5D2U9 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC4.08□□□□□ -1.76
HLA-DRB4X5D2U9 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
HLA-DRB4X5D2U9 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC4.08□□□□□ -1.76
HLA-DRB4X5D2U9 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
HLA-DRB4X5D2U9 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
HLA-DRB4X5D2U9 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
HLA-DRB4X5D2U9 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC4.08□□□□□ -1.76
HLA-DRB4X5D2U9 LINC01291-202ENST00000418204 441 ntTSL 5 BASIC4.08□□□□□ -1.76
HLA-DRB4X5D2U9 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
HLA-DRB4X5D2U9 AKR1B10P1-201ENST00000425765 942 ntBASIC4.08□□□□□ -1.76
HLA-DRB4X5D2U9 AC079807.1-201ENST00000429993 481 ntBASIC4.08□□□□□ -1.76
HLA-DRB4X5D2U9 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC4.08□□□□□ -1.76
HLA-DRB4X5D2U9 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC4.08□□□□□ -1.76
HLA-DRB4X5D2U9 RPL12P17-201ENST00000432393 498 ntBASIC4.08□□□□□ -1.76
HLA-DRB4X5D2U9 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC4.08□□□□□ -1.76
HLA-DRB4X5D2U9 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
HLA-DRB4X5D2U9 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC4.08□□□□□ -1.76
HLA-DRB4X5D2U9 BRAFP1-201ENST00000445336 2703 ntBASIC4.08□□□□□ -1.76
HLA-DRB4X5D2U9 RPL36AP39-201ENST00000445859 318 ntBASIC4.08□□□□□ -1.76
HLA-DRB4X5D2U9 HMGN1P36-201ENST00000446623 298 ntBASIC4.08□□□□□ -1.76
HLA-DRB4X5D2U9 PRPF38AP1-201ENST00000451976 933 ntBASIC4.08□□□□□ -1.76
HLA-DRB4X5D2U9 CREM-220ENST00000463314 964 ntTSL 2 BASIC4.08□□□□□ -1.76
HLA-DRB4X5D2U9 MYL12BP2-201ENST00000503948 512 ntBASIC4.08□□□□□ -1.76
HLA-DRB4X5D2U9 AC021106.1-201ENST00000509020 1058 ntBASIC4.08□□□□□ -1.76
HLA-DRB4X5D2U9 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
HLA-DRB4X5D2U9 AP006245.2-201ENST00000522004 300 ntBASIC4.08□□□□□ -1.76
HLA-DRB4X5D2U9 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
HLA-DRB4X5D2U9 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC4.08□□□□□ -1.76
HLA-DRB4X5D2U9 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC4.08□□□□□ -1.76
HLA-DRB4X5D2U9 AL359715.3-201ENST00000569267 2123 ntBASIC4.08□□□□□ -1.76
HLA-DRB4X5D2U9 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC4.08□□□□□ -1.76
HLA-DRB4X5D2U9 MTCYBP13-201ENST00000578634 1093 ntBASIC4.08□□□□□ -1.76
HLA-DRB4X5D2U9 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC4.08□□□□□ -1.76
HLA-DRB4X5D2U9 MIR4505-201ENST00000582238 73 ntBASIC4.08□□□□□ -1.76
HLA-DRB4X5D2U9 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC4.08□□□□□ -1.76
HLA-DRB4X5D2U9 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC4.08□□□□□ -1.76
HLA-DRB4X5D2U9 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
HLA-DRB4X5D2U9 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC4.08□□□□□ -1.76
HLA-DRB4X5D2U9 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC4.08□□□□□ -1.76
HLA-DRB4X5D2U9 AL122125.1-201ENST00000616999 600 ntBASIC4.08□□□□□ -1.76
HLA-DRB4X5D2U9 AL357153.4-201ENST00000620487 1016 ntBASIC4.08□□□□□ -1.76
HLA-DRB4X5D2U9 AC127024.6-201ENST00000621598 424 ntBASIC4.08□□□□□ -1.76
HLA-DRB4X5D2U9 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC4.08□□□□□ -1.76
HLA-DRB4X5D2U9 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC4.08□□□□□ -1.76
HLA-DRB4X5D2U9 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC4.08□□□□□ -1.76
HLA-DRB4X5D2U9 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
HLA-DRB4X5D2U9 OR5AQ1P-202ENST00000641257 1534 ntBASIC4.08□□□□□ -1.76
HLA-DRB4X5D2U9 SAMMSON-213ENST00000641336 1521 ntBASIC4.08□□□□□ -1.76
HLA-DRB4X5D2U9 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
HLA-DRB4X5D2U9 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
HLA-DRB4X5D2U9 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
HLA-DRB4X5D2U9 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
HLA-DRB4X5D2U9 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
HLA-DRB4X5D2U9 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.07□□□□□ -1.76
HLA-DRB4X5D2U9 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC4.07□□□□□ -1.76
HLA-DRB4X5D2U9 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
HLA-DRB4X5D2U9 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
HLA-DRB4X5D2U9 AC011447.7-201ENST00000624228 1590 ntBASIC4.07□□□□□ -1.76
HLA-DRB4X5D2U9 MTCO1P46-201ENST00000451639 1491 ntBASIC4.07□□□□□ -1.76
HLA-DRB4X5D2U9 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
HLA-DRB4X5D2U9 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
HLA-DRB4X5D2U9 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
HLA-DRB4X5D2U9 AL031985.1-201ENST00000392713 418 ntBASIC4.07□□□□□ -1.76
HLA-DRB4X5D2U9 MIR1271-201ENST00000408537 86 ntBASIC4.07□□□□□ -1.76
HLA-DRB4X5D2U9 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC4.07□□□□□ -1.76
HLA-DRB4X5D2U9 OR6E1P-201ENST00000414424 923 ntBASIC4.07□□□□□ -1.76
HLA-DRB4X5D2U9 OR13Z1P-201ENST00000416141 834 ntBASIC4.07□□□□□ -1.76
HLA-DRB4X5D2U9 VN1R3-201ENST00000418822 919 ntBASIC4.07□□□□□ -1.76
HLA-DRB4X5D2U9 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC4.07□□□□□ -1.76
HLA-DRB4X5D2U9 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
HLA-DRB4X5D2U9 HSPD1P12-201ENST00000429127 1069 ntBASIC4.07□□□□□ -1.76
HLA-DRB4X5D2U9 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC4.07□□□□□ -1.76
HLA-DRB4X5D2U9 NDUFB4P8-201ENST00000435351 367 ntBASIC4.07□□□□□ -1.76
HLA-DRB4X5D2U9 AL161636.2-201ENST00000445179 927 ntBASIC4.07□□□□□ -1.76
HLA-DRB4X5D2U9 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC4.07□□□□□ -1.76
HLA-DRB4X5D2U9 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC4.07□□□□□ -1.76
HLA-DRB4X5D2U9 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC4.07□□□□□ -1.76
HLA-DRB4X5D2U9 AP000797.2-201ENST00000475768 606 ntBASIC4.07□□□□□ -1.76
HLA-DRB4X5D2U9 ENSA-211ENST00000503345 793 ntTSL 3 BASIC4.07□□□□□ -1.76
HLA-DRB4X5D2U9 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC4.07□□□□□ -1.76
HLA-DRB4X5D2U9 AC091912.1-201ENST00000511351 248 ntBASIC4.07□□□□□ -1.76
HLA-DRB4X5D2U9 MTND6P2-201ENST00000512226 524 ntBASIC4.07□□□□□ -1.76
HLA-DRB4X5D2U9 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC4.07□□□□□ -1.76
HLA-DRB4X5D2U9 RN7SKP99-201ENST00000517028 307 ntBASIC4.07□□□□□ -1.76
HLA-DRB4X5D2U9 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC4.07□□□□□ -1.76
HLA-DRB4X5D2U9 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC4.07□□□□□ -1.76
HLA-DRB4X5D2U9 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC4.07□□□□□ -1.76
HLA-DRB4X5D2U9 AC006349.1-201ENST00000555526 235 ntBASIC4.07□□□□□ -1.76
HLA-DRB4X5D2U9 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 121.2 ms