Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC6.83□□□□□ -1.32
CTDP1Q9Y5B0 THAP12P9-201ENST00000503971 2360 ntBASIC6.83□□□□□ -1.32
CTDP1Q9Y5B0 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC6.83□□□□□ -1.32
CTDP1Q9Y5B0 AC112243.1-201ENST00000623949 3851 ntBASIC6.83□□□□□ -1.32
CTDP1Q9Y5B0 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
CTDP1Q9Y5B0 HTR4-206ENST00000520086 2272 ntTSL 2 BASIC6.83□□□□□ -1.32
CTDP1Q9Y5B0 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC6.83□□□□□ -1.32
CTDP1Q9Y5B0 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC6.82□□□□□ -1.32
CTDP1Q9Y5B0 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
CTDP1Q9Y5B0 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC6.82□□□□□ -1.32
CTDP1Q9Y5B0 AC097461.1-201ENST00000568928 2821 ntBASIC6.82□□□□□ -1.32
CTDP1Q9Y5B0 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC6.82□□□□□ -1.32
CTDP1Q9Y5B0 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC6.82□□□□□ -1.32
CTDP1Q9Y5B0 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
CTDP1Q9Y5B0 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC6.82□□□□□ -1.32
CTDP1Q9Y5B0 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC6.82□□□□□ -1.32
CTDP1Q9Y5B0 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
CTDP1Q9Y5B0 CAMK2D-202ENST00000342666 1940 ntTSL 5 BASIC6.82□□□□□ -1.32
CTDP1Q9Y5B0 OR13C1P-202ENST00000641378 2919 ntBASIC6.82□□□□□ -1.32
CTDP1Q9Y5B0 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
CTDP1Q9Y5B0 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
CTDP1Q9Y5B0 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
CTDP1Q9Y5B0 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
CTDP1Q9Y5B0 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC6.82□□□□□ -1.32
CTDP1Q9Y5B0 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
CTDP1Q9Y5B0 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
CTDP1Q9Y5B0 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
CTDP1Q9Y5B0 AMZ2P2-201ENST00000406819 1057 ntBASIC6.82□□□□□ -1.32
CTDP1Q9Y5B0 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC6.82□□□□□ -1.32
CTDP1Q9Y5B0 RN7SKP293-201ENST00000411389 296 ntBASIC6.82□□□□□ -1.32
CTDP1Q9Y5B0 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC6.82□□□□□ -1.32
CTDP1Q9Y5B0 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC6.82□□□□□ -1.32
CTDP1Q9Y5B0 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC6.82□□□□□ -1.32
CTDP1Q9Y5B0 PTP4A1P1-201ENST00000420539 515 ntBASIC6.82□□□□□ -1.32
CTDP1Q9Y5B0 RCC2P2-201ENST00000422174 918 ntBASIC6.82□□□□□ -1.32
CTDP1Q9Y5B0 OR5W1P-201ENST00000423705 938 ntBASIC6.82□□□□□ -1.32
CTDP1Q9Y5B0 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC6.82□□□□□ -1.32
CTDP1Q9Y5B0 AL121776.1-201ENST00000429337 372 ntBASIC6.82□□□□□ -1.32
CTDP1Q9Y5B0 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
CTDP1Q9Y5B0 AL512661.1-201ENST00000434586 1253 ntBASIC6.82□□□□□ -1.32
CTDP1Q9Y5B0 SNRPFP2-201ENST00000440710 251 ntBASIC6.82□□□□□ -1.32
CTDP1Q9Y5B0 AC023141.8-201ENST00000442554 208 ntBASIC6.82□□□□□ -1.32
CTDP1Q9Y5B0 AC007000.2-201ENST00000442564 487 ntBASIC6.82□□□□□ -1.32
CTDP1Q9Y5B0 LRRC37A14P-201ENST00000452297 462 ntBASIC6.82□□□□□ -1.32
CTDP1Q9Y5B0 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
CTDP1Q9Y5B0 NPM1P17-201ENST00000479221 602 ntBASIC6.82□□□□□ -1.32
CTDP1Q9Y5B0 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC6.82□□□□□ -1.32
CTDP1Q9Y5B0 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC6.82□□□□□ -1.32
CTDP1Q9Y5B0 AC105313.1-201ENST00000509121 353 ntBASIC6.82□□□□□ -1.32
CTDP1Q9Y5B0 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC6.82□□□□□ -1.32
CTDP1Q9Y5B0 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC6.82□□□□□ -1.32
CTDP1Q9Y5B0 AC021451.1-201ENST00000523498 1129 ntBASIC6.82□□□□□ -1.32
CTDP1Q9Y5B0 C1DP5-201ENST00000525775 383 ntBASIC6.82□□□□□ -1.32
CTDP1Q9Y5B0 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC6.82□□□□□ -1.32
CTDP1Q9Y5B0 NPM1P35-201ENST00000533043 868 ntBASIC6.82□□□□□ -1.32
CTDP1Q9Y5B0 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC6.82□□□□□ -1.32
CTDP1Q9Y5B0 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC6.82□□□□□ -1.32
CTDP1Q9Y5B0 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC6.82□□□□□ -1.32
CTDP1Q9Y5B0 AC010547.6-201ENST00000571789 193 ntBASIC6.82□□□□□ -1.32
CTDP1Q9Y5B0 TXNP4-201ENST00000575018 310 ntBASIC6.82□□□□□ -1.32
CTDP1Q9Y5B0 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC6.82□□□□□ -1.32
CTDP1Q9Y5B0 FAM60CP-201ENST00000591086 664 ntBASIC6.82□□□□□ -1.32
CTDP1Q9Y5B0 Z98949.1-210ENST00000597548 766 ntTSL 5 BASIC6.82□□□□□ -1.32
CTDP1Q9Y5B0 DUXAP3-201ENST00000603616 594 ntBASIC6.82□□□□□ -1.32
CTDP1Q9Y5B0 BX323046.1-201ENST00000610145 535 ntBASIC6.82□□□□□ -1.32
CTDP1Q9Y5B0 AL031658.2-201ENST00000616850 651 ntBASIC6.82□□□□□ -1.32
CTDP1Q9Y5B0 MIR6886-201ENST00000619864 61 ntBASIC6.82□□□□□ -1.32
CTDP1Q9Y5B0 AC084824.4-201ENST00000620106 731 ntBASIC6.82□□□□□ -1.32
CTDP1Q9Y5B0 AC007275.1-201ENST00000621243 671 ntBASIC6.82□□□□□ -1.32
CTDP1Q9Y5B0 AL691477.1-201ENST00000624398 162 ntBASIC6.82□□□□□ -1.32
CTDP1Q9Y5B0 AL590396.4-201ENST00000636779 956 ntBASIC6.82□□□□□ -1.32
CTDP1Q9Y5B0 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC6.82□□□□□ -1.32
CTDP1Q9Y5B0 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC6.82□□□□□ -1.32
CTDP1Q9Y5B0 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
CTDP1Q9Y5B0 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
CTDP1Q9Y5B0 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC6.82□□□□□ -1.32
CTDP1Q9Y5B0 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC6.82□□□□□ -1.32
CTDP1Q9Y5B0 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
CTDP1Q9Y5B0 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC6.82□□□□□ -1.32
CTDP1Q9Y5B0 AC123769.1-201ENST00000530992 3192 ntBASIC6.81□□□□□ -1.32
CTDP1Q9Y5B0 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
CTDP1Q9Y5B0 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
CTDP1Q9Y5B0 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
CTDP1Q9Y5B0 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
CTDP1Q9Y5B0 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
CTDP1Q9Y5B0 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC6.81□□□□□ -1.32
CTDP1Q9Y5B0 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
CTDP1Q9Y5B0 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
CTDP1Q9Y5B0 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
CTDP1Q9Y5B0 AL353763.1-201ENST00000624467 1628 ntBASIC6.81□□□□□ -1.32
CTDP1Q9Y5B0 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
CTDP1Q9Y5B0 ECHDC1-202ENST00000368289 909 ntTSL 5 BASIC6.81□□□□□ -1.32
CTDP1Q9Y5B0 PPCS-201ENST00000372556 984 ntTSL 2 BASIC6.81□□□□□ -1.32
CTDP1Q9Y5B0 AL451142.1-201ENST00000375867 775 ntBASIC6.81□□□□□ -1.32
CTDP1Q9Y5B0 HMGB1P20-201ENST00000402555 677 ntBASIC6.81□□□□□ -1.32
CTDP1Q9Y5B0 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC6.81□□□□□ -1.32
CTDP1Q9Y5B0 MTND4P24-201ENST00000424002 397 ntBASIC6.81□□□□□ -1.32
CTDP1Q9Y5B0 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC6.81□□□□□ -1.32
CTDP1Q9Y5B0 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
CTDP1Q9Y5B0 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC6.81□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 70.4 ms