Protein–RNA interactions for Protein: Q9P2H5

USP35, Ubiquitin carboxyl-terminal hydrolase 35, humanhuman

Predictions only

Length 1,018 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP35Q9P2H5 AC139697.1-201ENST00000548429 745 ntBASIC8.05□□□□□ -1.12
USP35Q9P2H5 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC8.05□□□□□ -1.12
USP35Q9P2H5 DHFRP1-201ENST00000579682 559 ntBASIC8.05□□□□□ -1.12
USP35Q9P2H5 TVP23B-209ENST00000581733 1258 ntTSL 5 BASIC8.05□□□□□ -1.12
USP35Q9P2H5 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
USP35Q9P2H5 SUMO2P14-201ENST00000604488 293 ntBASIC8.05□□□□□ -1.12
USP35Q9P2H5 AC024933.1-201ENST00000608472 348 ntBASIC8.05□□□□□ -1.12
USP35Q9P2H5 AC037198.3-201ENST00000616754 526 ntBASIC8.05□□□□□ -1.12
USP35Q9P2H5 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC8.05□□□□□ -1.12
USP35Q9P2H5 AC087516.1-201ENST00000561236 2428 ntBASIC8.05□□□□□ -1.12
USP35Q9P2H5 PDZK1P1-202ENST00000425209 1350 ntBASIC8.05□□□□□ -1.12
USP35Q9P2H5 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC8.05□□□□□ -1.12
USP35Q9P2H5 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC8.04□□□□□ -1.12
USP35Q9P2H5 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC8.04□□□□□ -1.12
USP35Q9P2H5 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC8.04□□□□□ -1.12
USP35Q9P2H5 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
USP35Q9P2H5 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC8.04□□□□□ -1.12
USP35Q9P2H5 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC8.04□□□□□ -1.12
USP35Q9P2H5 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC8.04□□□□□ -1.12
USP35Q9P2H5 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC8.04□□□□□ -1.12
USP35Q9P2H5 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
USP35Q9P2H5 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC8.04□□□□□ -1.12
USP35Q9P2H5 AL161912.4-201ENST00000623889 2468 ntBASIC8.04□□□□□ -1.12
USP35Q9P2H5 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC8.04□□□□□ -1.12
USP35Q9P2H5 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC8.04□□□□□ -1.12
USP35Q9P2H5 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC8.04□□□□□ -1.12
USP35Q9P2H5 RN7SKP128-201ENST00000364270 303 ntBASIC8.04□□□□□ -1.12
USP35Q9P2H5 RN7SKP124-201ENST00000364730 341 ntBASIC8.04□□□□□ -1.12
USP35Q9P2H5 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC8.04□□□□□ -1.12
USP35Q9P2H5 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC8.04□□□□□ -1.12
USP35Q9P2H5 NIFKP3-201ENST00000417799 865 ntBASIC8.04□□□□□ -1.12
USP35Q9P2H5 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC8.04□□□□□ -1.12
USP35Q9P2H5 OR6K4P-201ENST00000423179 955 ntBASIC8.04□□□□□ -1.12
USP35Q9P2H5 AC012075.1-201ENST00000436549 580 ntBASIC8.04□□□□□ -1.12
USP35Q9P2H5 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC8.04□□□□□ -1.12
USP35Q9P2H5 SPRYD7P1-201ENST00000443861 570 ntBASIC8.04□□□□□ -1.12
USP35Q9P2H5 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC8.04□□□□□ -1.12
USP35Q9P2H5 LDHBP2-201ENST00000456969 1005 ntBASIC8.04□□□□□ -1.12
USP35Q9P2H5 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC8.04□□□□□ -1.12
USP35Q9P2H5 AC073610.1-201ENST00000489971 396 ntBASIC8.04□□□□□ -1.12
USP35Q9P2H5 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC8.04□□□□□ -1.12
USP35Q9P2H5 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC8.04□□□□□ -1.12
USP35Q9P2H5 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC8.04□□□□□ -1.12
USP35Q9P2H5 HAUS1P3-201ENST00000523909 662 ntBASIC8.04□□□□□ -1.12
USP35Q9P2H5 OR8X1P-201ENST00000534542 869 ntBASIC8.04□□□□□ -1.12
USP35Q9P2H5 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC8.04□□□□□ -1.12
USP35Q9P2H5 AL121579.2-201ENST00000555466 590 ntBASIC8.04□□□□□ -1.12
USP35Q9P2H5 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC8.04□□□□□ -1.12
USP35Q9P2H5 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC8.04□□□□□ -1.12
USP35Q9P2H5 AL583832.1-201ENST00000603227 784 ntBASIC8.04□□□□□ -1.12
USP35Q9P2H5 AC005034.4-201ENST00000603612 899 ntBASIC8.04□□□□□ -1.12
USP35Q9P2H5 BNIP3P31-201ENST00000604515 566 ntBASIC8.04□□□□□ -1.12
USP35Q9P2H5 AC007204.2-201ENST00000615022 616 ntBASIC8.04□□□□□ -1.12
USP35Q9P2H5 MIR7155-201ENST00000615925 56 ntBASIC8.04□□□□□ -1.12
USP35Q9P2H5 AC018926.1-201ENST00000616335 435 ntBASIC8.04□□□□□ -1.12
USP35Q9P2H5 AC007683.2-201ENST00000624681 714 ntBASIC8.04□□□□□ -1.12
USP35Q9P2H5 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC8.04□□□□□ -1.12
USP35Q9P2H5 AC133552.1-201ENST00000569988 4007 ntBASIC8.04□□□□□ -1.12
USP35Q9P2H5 DMD-228ENST00000541735 7080 ntTSL 5 BASIC8.04□□□□□ -1.12
USP35Q9P2H5 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
USP35Q9P2H5 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
USP35Q9P2H5 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC8.04□□□□□ -1.12
USP35Q9P2H5 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC8.03□□□□□ -1.12
USP35Q9P2H5 VPS35P1-201ENST00000563400 1518 ntBASIC8.03□□□□□ -1.12
USP35Q9P2H5 AC011815.2-201ENST00000618230 2021 ntBASIC8.03□□□□□ -1.12
USP35Q9P2H5 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC8.03□□□□□ -1.12
USP35Q9P2H5 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
USP35Q9P2H5 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
USP35Q9P2H5 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC8.03□□□□□ -1.12
USP35Q9P2H5 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC8.03□□□□□ -1.12
USP35Q9P2H5 ZNF733P-202ENST00000444809 1573 ntBASIC8.03□□□□□ -1.12
USP35Q9P2H5 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
USP35Q9P2H5 RNU6-252P-201ENST00000363232 107 ntBASIC8.03□□□□□ -1.12
USP35Q9P2H5 RPL5P19-201ENST00000404228 893 ntBASIC8.03□□□□□ -1.12
USP35Q9P2H5 SNORA79B-201ENST00000410557 148 ntBASIC8.03□□□□□ -1.12
USP35Q9P2H5 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC8.03□□□□□ -1.12
USP35Q9P2H5 OR6E1P-201ENST00000414424 923 ntBASIC8.03□□□□□ -1.12
USP35Q9P2H5 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC8.03□□□□□ -1.12
USP35Q9P2H5 AL512661.1-201ENST00000434586 1253 ntBASIC8.03□□□□□ -1.12
USP35Q9P2H5 AL390879.1-201ENST00000439143 386 ntBASIC8.03□□□□□ -1.12
USP35Q9P2H5 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC8.03□□□□□ -1.12
USP35Q9P2H5 HMGB1P5-202ENST00000451497 985 ntBASIC8.03□□□□□ -1.12
USP35Q9P2H5 COPS8P2-201ENST00000473228 627 ntBASIC8.03□□□□□ -1.12
USP35Q9P2H5 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC8.03□□□□□ -1.12
USP35Q9P2H5 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC8.03□□□□□ -1.12
USP35Q9P2H5 OR10G5P-201ENST00000532733 358 ntBASIC8.03□□□□□ -1.12
USP35Q9P2H5 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC8.03□□□□□ -1.12
USP35Q9P2H5 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC8.03□□□□□ -1.12
USP35Q9P2H5 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC8.03□□□□□ -1.12
USP35Q9P2H5 AC027229.1-201ENST00000583887 253 ntBASIC8.03□□□□□ -1.12
USP35Q9P2H5 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC8.03□□□□□ -1.12
USP35Q9P2H5 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC8.03□□□□□ -1.12
USP35Q9P2H5 AP001267.4-201ENST00000602598 545 ntBASIC8.03□□□□□ -1.12
USP35Q9P2H5 AL138955.1-201ENST00000622881 1040 ntBASIC8.03□□□□□ -1.12
USP35Q9P2H5 AC068880.4-201ENST00000623082 495 ntBASIC8.03□□□□□ -1.12
USP35Q9P2H5 AP000550.3-201ENST00000637734 379 ntBASIC8.03□□□□□ -1.12
USP35Q9P2H5 AC087565.3-203ENST00000641018 837 ntBASIC8.03□□□□□ -1.12
USP35Q9P2H5 CASC19-222ENST00000641321 1173 ntBASIC8.03□□□□□ -1.12
USP35Q9P2H5 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
USP35Q9P2H5 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 90.6 ms