Protein–RNA interactions for Protein: Q9NPC3

CCNB1IP1, E3 ubiquitin-protein ligase CCNB1IP1, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB1IP1Q9NPC3 AC021678.3-201ENST00000517893 476 ntBASIC5.02□□□□□ -1.61
CCNB1IP1Q9NPC3 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC5.02□□□□□ -1.61
CCNB1IP1Q9NPC3 AC139365.2-201ENST00000517972 253 ntBASIC5.02□□□□□ -1.61
CCNB1IP1Q9NPC3 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC5.02□□□□□ -1.61
CCNB1IP1Q9NPC3 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CCNB1IP1Q9NPC3 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CCNB1IP1Q9NPC3 AC096586.2-201ENST00000610260 441 ntBASIC5.02□□□□□ -1.61
CCNB1IP1Q9NPC3 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CCNB1IP1Q9NPC3 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CCNB1IP1Q9NPC3 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.02□□□□□ -1.61
CCNB1IP1Q9NPC3 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC5.02□□□□□ -1.61
CCNB1IP1Q9NPC3 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CCNB1IP1Q9NPC3 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CCNB1IP1Q9NPC3 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CCNB1IP1Q9NPC3 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.01□□□□□ -1.61
CCNB1IP1Q9NPC3 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CCNB1IP1Q9NPC3 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.01□□□□□ -1.61
CCNB1IP1Q9NPC3 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CCNB1IP1Q9NPC3 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CCNB1IP1Q9NPC3 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC5.01□□□□□ -1.61
CCNB1IP1Q9NPC3 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CCNB1IP1Q9NPC3 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CCNB1IP1Q9NPC3 OR7E25P-201ENST00000344844 931 ntBASIC5.01□□□□□ -1.61
CCNB1IP1Q9NPC3 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CCNB1IP1Q9NPC3 OR7E101P-201ENST00000400428 513 ntBASIC5.01□□□□□ -1.61
CCNB1IP1Q9NPC3 HIST1H3PS1-201ENST00000404612 417 ntBASIC5.01□□□□□ -1.61
CCNB1IP1Q9NPC3 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC5.01□□□□□ -1.61
CCNB1IP1Q9NPC3 PMCHL1-203ENST00000423301 697 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CCNB1IP1Q9NPC3 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
CCNB1IP1Q9NPC3 MTND6P12-201ENST00000428247 522 ntBASIC5.01□□□□□ -1.61
CCNB1IP1Q9NPC3 AL022331.1-201ENST00000429025 477 ntBASIC5.01□□□□□ -1.61
CCNB1IP1Q9NPC3 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC5.01□□□□□ -1.61
CCNB1IP1Q9NPC3 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC5.01□□□□□ -1.61
CCNB1IP1Q9NPC3 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC5.01□□□□□ -1.61
CCNB1IP1Q9NPC3 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC5.01□□□□□ -1.61
CCNB1IP1Q9NPC3 AL512637.1-201ENST00000439523 1231 ntBASIC5.01□□□□□ -1.61
CCNB1IP1Q9NPC3 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC5.01□□□□□ -1.61
CCNB1IP1Q9NPC3 OR52Y1P-201ENST00000452418 828 ntBASIC5.01□□□□□ -1.61
CCNB1IP1Q9NPC3 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC5.01□□□□□ -1.61
CCNB1IP1Q9NPC3 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC5.01□□□□□ -1.61
CCNB1IP1Q9NPC3 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC5.01□□□□□ -1.61
CCNB1IP1Q9NPC3 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC5.01□□□□□ -1.61
CCNB1IP1Q9NPC3 IGLV3-30-201ENST00000524362 298 ntBASIC5.01□□□□□ -1.61
CCNB1IP1Q9NPC3 AC005363.1-201ENST00000530779 351 ntBASIC5.01□□□□□ -1.61
CCNB1IP1Q9NPC3 BNIP3P1-201ENST00000547295 580 ntBASIC5.01□□□□□ -1.61
CCNB1IP1Q9NPC3 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC5.01□□□□□ -1.61
CCNB1IP1Q9NPC3 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC5.01□□□□□ -1.61
CCNB1IP1Q9NPC3 AP001496.3-201ENST00000580230 913 ntBASIC5.01□□□□□ -1.61
CCNB1IP1Q9NPC3 AP002884.5-201ENST00000595053 1132 ntBASIC5.01□□□□□ -1.61
CCNB1IP1Q9NPC3 QTRT1P1-201ENST00000604344 1078 ntBASIC5.01□□□□□ -1.61
CCNB1IP1Q9NPC3 AP001642.1-201ENST00000624727 2117 ntBASIC5.01□□□□□ -1.61
CCNB1IP1Q9NPC3 AC129915.3-201ENST00000634128 948 ntBASIC5.01□□□□□ -1.61
CCNB1IP1Q9NPC3 AC087565.3-203ENST00000641018 837 ntBASIC5.01□□□□□ -1.61
CCNB1IP1Q9NPC3 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CCNB1IP1Q9NPC3 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.01□□□□□ -1.61
CCNB1IP1Q9NPC3 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC5.01□□□□□ -1.61
CCNB1IP1Q9NPC3 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC5.01□□□□□ -1.61
CCNB1IP1Q9NPC3 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CCNB1IP1Q9NPC3 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC5.01□□□□□ -1.61
CCNB1IP1Q9NPC3 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CCNB1IP1Q9NPC3 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
CCNB1IP1Q9NPC3 CASC19-248ENST00000641674 1356 ntBASIC5.01□□□□□ -1.61
CCNB1IP1Q9NPC3 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
CCNB1IP1Q9NPC3 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC5.01□□□□□ -1.61
CCNB1IP1Q9NPC3 AC100778.3-201ENST00000580060 1750 ntBASIC5.01□□□□□ -1.61
CCNB1IP1Q9NPC3 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CCNB1IP1Q9NPC3 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CCNB1IP1Q9NPC3 AC004817.4-201ENST00000602396 3625 ntBASIC5.01□□□□□ -1.61
CCNB1IP1Q9NPC3 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC5□□□□□ -1.61
CCNB1IP1Q9NPC3 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC5□□□□□ -1.61
CCNB1IP1Q9NPC3 AC104260.2-201ENST00000623551 3497 ntBASIC5□□□□□ -1.61
CCNB1IP1Q9NPC3 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
CCNB1IP1Q9NPC3 MT-RNR2-201ENST00000387347 1559 ntBASIC5□□□□□ -1.61
CCNB1IP1Q9NPC3 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CCNB1IP1Q9NPC3 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC5□□□□□ -1.61
CCNB1IP1Q9NPC3 AC106872.5-201ENST00000508856 1416 ntBASIC5□□□□□ -1.61
CCNB1IP1Q9NPC3 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5□□□□□ -1.61
CCNB1IP1Q9NPC3 AC027228.2-201ENST00000567141 2154 ntBASIC5□□□□□ -1.61
CCNB1IP1Q9NPC3 PWAR1-201ENST00000624188 2414 ntBASIC5□□□□□ -1.61
CCNB1IP1Q9NPC3 OR52B3P-201ENST00000314715 928 ntBASIC5□□□□□ -1.61
CCNB1IP1Q9NPC3 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC5□□□□□ -1.61
CCNB1IP1Q9NPC3 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CCNB1IP1Q9NPC3 MIR375-201ENST00000362103 64 ntBASIC5□□□□□ -1.61
CCNB1IP1Q9NPC3 RNU1-150P-201ENST00000362491 162 ntBASIC5□□□□□ -1.61
CCNB1IP1Q9NPC3 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5□□□□□ -1.61
CCNB1IP1Q9NPC3 RMRPP5-201ENST00000411156 267 ntBASIC5□□□□□ -1.61
CCNB1IP1Q9NPC3 RPS6P23-201ENST00000413224 722 ntBASIC5□□□□□ -1.61
CCNB1IP1Q9NPC3 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC5□□□□□ -1.61
CCNB1IP1Q9NPC3 RPL34P6-201ENST00000432390 345 ntBASIC5□□□□□ -1.61
CCNB1IP1Q9NPC3 HMGB3P24-201ENST00000433260 622 ntBASIC5□□□□□ -1.61
CCNB1IP1Q9NPC3 AL157385.1-201ENST00000446973 268 ntBASIC5□□□□□ -1.61
CCNB1IP1Q9NPC3 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC5□□□□□ -1.61
CCNB1IP1Q9NPC3 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5□□□□□ -1.61
CCNB1IP1Q9NPC3 AC011476.1-201ENST00000466725 307 ntBASIC5□□□□□ -1.61
CCNB1IP1Q9NPC3 OR2A1-AS1-202ENST00000467944 422 ntBASIC5□□□□□ -1.61
CCNB1IP1Q9NPC3 NDUFA5P5-201ENST00000468361 342 ntBASIC5□□□□□ -1.61
CCNB1IP1Q9NPC3 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC5□□□□□ -1.61
CCNB1IP1Q9NPC3 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC5□□□□□ -1.61
CCNB1IP1Q9NPC3 SCARNA20.4-201ENST00000516969 131 ntBASIC5□□□□□ -1.61
CCNB1IP1Q9NPC3 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC5□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 75.3 ms