Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 IGHV1-14-201ENST00000523391 241 ntBASIC4.97□□□□□ -1.61
CHD8Q9HCK8 AC093765.1-201ENST00000603758 881 ntBASIC4.97□□□□□ -1.61
CHD8Q9HCK8 AL121873.1-201ENST00000616013 524 ntBASIC4.97□□□□□ -1.61
CHD8Q9HCK8 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
CHD8Q9HCK8 MEF2C-244ENST00000636998 5936 ntTSL 5 BASIC4.97□□□□□ -1.61
CHD8Q9HCK8 FGD4-202ENST00000427716 8242 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
CHD8Q9HCK8 SDAD1P1-202ENST00000524156 2051 ntBASIC4.97□□□□□ -1.61
CHD8Q9HCK8 HSD17B13-201ENST00000302219 2269 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
CHD8Q9HCK8 USP47-203ENST00000399455 7396 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.61
CHD8Q9HCK8 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CHD8Q9HCK8 SENP8-201ENST00000340912 4281 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CHD8Q9HCK8 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
CHD8Q9HCK8 AL590762.2-201ENST00000395798 571 ntBASIC4.96□□□□□ -1.62
CHD8Q9HCK8 AC068481.1-201ENST00000415520 530 ntTSL 4 BASIC4.96□□□□□ -1.62
CHD8Q9HCK8 HSFY1P1-201ENST00000423928 1178 ntBASIC4.96□□□□□ -1.62
CHD8Q9HCK8 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC4.96□□□□□ -1.62
CHD8Q9HCK8 AC104634.1-201ENST00000452720 462 ntBASIC4.96□□□□□ -1.62
CHD8Q9HCK8 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC4.96□□□□□ -1.62
CHD8Q9HCK8 LINC02218-201ENST00000503267 529 ntTSL 2 BASIC4.96□□□□□ -1.62
CHD8Q9HCK8 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC4.96□□□□□ -1.62
CHD8Q9HCK8 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC4.96□□□□□ -1.62
CHD8Q9HCK8 BRD8-202ENST00000254900 4388 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CHD8Q9HCK8 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC4.96□□□□□ -1.62
CHD8Q9HCK8 NFATC3-201ENST00000329524 6144 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CHD8Q9HCK8 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CHD8Q9HCK8 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CHD8Q9HCK8 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CHD8Q9HCK8 FER1L6-201ENST00000522917 6051 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CHD8Q9HCK8 MT-RNR2-201ENST00000387347 1559 ntBASIC4.96□□□□□ -1.62
CHD8Q9HCK8 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CHD8Q9HCK8 CSNK1A1-204ENST00000504676 1772 ntTSL 2 BASIC4.96□□□□□ -1.62
CHD8Q9HCK8 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC4.96□□□□□ -1.62
CHD8Q9HCK8 SNORA63.1-201ENST00000362493 131 ntBASIC4.96□□□□□ -1.62
CHD8Q9HCK8 NPM1P36-201ENST00000415681 835 ntBASIC4.96□□□□□ -1.62
CHD8Q9HCK8 EI24P4-201ENST00000423683 1078 ntBASIC4.96□□□□□ -1.62
CHD8Q9HCK8 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CHD8Q9HCK8 RPL12P20-201ENST00000475538 479 ntBASIC4.96□□□□□ -1.62
CHD8Q9HCK8 HMGN2P25-201ENST00000486956 268 ntBASIC4.96□□□□□ -1.62
CHD8Q9HCK8 RN7SL814P-201ENST00000487715 300 ntBASIC4.96□□□□□ -1.62
CHD8Q9HCK8 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC4.96□□□□□ -1.62
CHD8Q9HCK8 IGLV3-24-201ENST00000517477 197 ntBASIC4.96□□□□□ -1.62
CHD8Q9HCK8 RGS5-219ENST00000528019 512 ntTSL 4 BASIC4.96□□□□□ -1.62
CHD8Q9HCK8 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC4.96□□□□□ -1.62
CHD8Q9HCK8 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC4.96□□□□□ -1.62
CHD8Q9HCK8 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC4.96□□□□□ -1.62
CHD8Q9HCK8 RN7SL356P-201ENST00000582228 248 ntBASIC4.96□□□□□ -1.62
CHD8Q9HCK8 UNC79-202ENST00000393151 7908 ntTSL 5 BASIC4.96□□□□□ -1.62
CHD8Q9HCK8 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CHD8Q9HCK8 GSTCD-201ENST00000360505 2154 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CHD8Q9HCK8 DNA2-208ENST00000551118 3468 ntTSL 5 BASIC4.95□□□□□ -1.62
CHD8Q9HCK8 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC4.95□□□□□ -1.62
CHD8Q9HCK8 WDCP-202ENST00000406895 3700 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
CHD8Q9HCK8 GAGE1-204ENST00000619375 2873 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
CHD8Q9HCK8 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
CHD8Q9HCK8 KAT6B-202ENST00000372711 7560 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
CHD8Q9HCK8 PHLPP2-201ENST00000393524 8467 ntTSL 2 BASIC4.95□□□□□ -1.62
CHD8Q9HCK8 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
CHD8Q9HCK8 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC4.95□□□□□ -1.62
CHD8Q9HCK8 ZRANB1-201ENST00000359653 5695 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CHD8Q9HCK8 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC4.95□□□□□ -1.62
CHD8Q9HCK8 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC4.95□□□□□ -1.62
CHD8Q9HCK8 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
CHD8Q9HCK8 POLH-201ENST00000372226 3322 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CHD8Q9HCK8 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC4.95□□□□□ -1.62
CHD8Q9HCK8 AP002530.1-201ENST00000405705 684 ntBASIC4.95□□□□□ -1.62
CHD8Q9HCK8 ZNF385D-AS1-201ENST00000412369 705 ntTSL 3 BASIC4.95□□□□□ -1.62
CHD8Q9HCK8 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC4.95□□□□□ -1.62
CHD8Q9HCK8 MRPL35P2-201ENST00000448009 511 ntBASIC4.95□□□□□ -1.62
CHD8Q9HCK8 NIFKP7-201ENST00000503365 834 ntBASIC4.95□□□□□ -1.62
CHD8Q9HCK8 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC4.95□□□□□ -1.62
CHD8Q9HCK8 MORF4L1P3-201ENST00000525966 950 ntBASIC4.95□□□□□ -1.62
CHD8Q9HCK8 ZNF415P1-201ENST00000582279 1166 ntBASIC4.95□□□□□ -1.62
CHD8Q9HCK8 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC4.95□□□□□ -1.62
CHD8Q9HCK8 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC4.95□□□□□ -1.62
CHD8Q9HCK8 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC4.95□□□□□ -1.62
CHD8Q9HCK8 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CHD8Q9HCK8 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CHD8Q9HCK8 POT1-202ENST00000393329 3950 ntTSL 5 BASIC4.95□□□□□ -1.62
CHD8Q9HCK8 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CHD8Q9HCK8 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
CHD8Q9HCK8 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC4.95□□□□□ -1.62
CHD8Q9HCK8 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
CHD8Q9HCK8 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC4.95□□□□□ -1.62
CHD8Q9HCK8 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC4.95□□□□□ -1.62
CHD8Q9HCK8 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC4.95□□□□□ -1.62
CHD8Q9HCK8 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
CHD8Q9HCK8 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CHD8Q9HCK8 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC4.95□□□□□ -1.62
CHD8Q9HCK8 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CHD8Q9HCK8 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CHD8Q9HCK8 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CHD8Q9HCK8 AL121657.1-201ENST00000327215 531 ntBASIC4.95□□□□□ -1.62
CHD8Q9HCK8 TEX38-202ENST00000415500 566 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CHD8Q9HCK8 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.95□□□□□ -1.62
CHD8Q9HCK8 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC4.95□□□□□ -1.62
CHD8Q9HCK8 AL133372.1-201ENST00000493565 745 ntBASIC4.95□□□□□ -1.62
CHD8Q9HCK8 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC4.95□□□□□ -1.62
CHD8Q9HCK8 AC106806.2-201ENST00000509365 500 ntBASIC4.95□□□□□ -1.62
CHD8Q9HCK8 ASPH-226ENST00000522919 1277 ntTSL 3 BASIC4.95□□□□□ -1.62
CHD8Q9HCK8 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.95□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms