Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.14□□□□□ -1.59
LRTM1Q9HBL6 AC022417.1-201ENST00000624768 1303 ntBASIC5.14□□□□□ -1.59
LRTM1Q9HBL6 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
LRTM1Q9HBL6 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
LRTM1Q9HBL6 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
LRTM1Q9HBL6 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
LRTM1Q9HBL6 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.14□□□□□ -1.59
LRTM1Q9HBL6 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC5.14□□□□□ -1.59
LRTM1Q9HBL6 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
LRTM1Q9HBL6 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.14□□□□□ -1.59
LRTM1Q9HBL6 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
LRTM1Q9HBL6 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
LRTM1Q9HBL6 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.13□□□□□ -1.59
LRTM1Q9HBL6 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
LRTM1Q9HBL6 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
LRTM1Q9HBL6 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
LRTM1Q9HBL6 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
LRTM1Q9HBL6 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
LRTM1Q9HBL6 OR9K1P-201ENST00000326513 941 ntBASIC5.13□□□□□ -1.59
LRTM1Q9HBL6 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
LRTM1Q9HBL6 PPCS-201ENST00000372556 984 ntTSL 2 BASIC5.13□□□□□ -1.59
LRTM1Q9HBL6 U3.25-201ENST00000391209 220 ntBASIC5.13□□□□□ -1.59
LRTM1Q9HBL6 AL358178.1-201ENST00000407698 397 ntBASIC5.13□□□□□ -1.59
LRTM1Q9HBL6 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.13□□□□□ -1.59
LRTM1Q9HBL6 COX5BP7-201ENST00000414780 274 ntBASIC5.13□□□□□ -1.59
LRTM1Q9HBL6 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.13□□□□□ -1.59
LRTM1Q9HBL6 TNPO1P1-201ENST00000423641 1138 ntBASIC5.13□□□□□ -1.59
LRTM1Q9HBL6 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC5.13□□□□□ -1.59
LRTM1Q9HBL6 GK-IT1-201ENST00000441146 397 ntTSL 5 BASIC5.13□□□□□ -1.59
LRTM1Q9HBL6 AL163193.1-201ENST00000444895 788 ntBASIC5.13□□□□□ -1.59
LRTM1Q9HBL6 AC105399.1-202ENST00000447303 205 ntBASIC5.13□□□□□ -1.59
LRTM1Q9HBL6 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC5.13□□□□□ -1.59
LRTM1Q9HBL6 CBX1P5-201ENST00000475330 559 ntBASIC5.13□□□□□ -1.59
LRTM1Q9HBL6 RPL7P41-201ENST00000485823 957 ntBASIC5.13□□□□□ -1.59
LRTM1Q9HBL6 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC5.13□□□□□ -1.59
LRTM1Q9HBL6 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC5.13□□□□□ -1.59
LRTM1Q9HBL6 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC5.13□□□□□ -1.59
LRTM1Q9HBL6 AC108043.1-201ENST00000512696 574 ntBASIC5.13□□□□□ -1.59
LRTM1Q9HBL6 NPM1P21-201ENST00000513394 762 ntBASIC5.13□□□□□ -1.59
LRTM1Q9HBL6 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC5.13□□□□□ -1.59
LRTM1Q9HBL6 ATP5LP3-201ENST00000514223 304 ntBASIC5.13□□□□□ -1.59
LRTM1Q9HBL6 AL359219.2-201ENST00000555184 348 ntBASIC5.13□□□□□ -1.59
LRTM1Q9HBL6 AC040958.1-201ENST00000561102 201 ntBASIC5.13□□□□□ -1.59
LRTM1Q9HBL6 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
LRTM1Q9HBL6 SNORD95-201ENST00000579879 68 ntBASIC5.13□□□□□ -1.59
LRTM1Q9HBL6 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC5.13□□□□□ -1.59
LRTM1Q9HBL6 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC5.13□□□□□ -1.59
LRTM1Q9HBL6 OR7E18P-201ENST00000592589 702 ntBASIC5.13□□□□□ -1.59
LRTM1Q9HBL6 RNA5SP440-201ENST00000612665 119 ntBASIC5.13□□□□□ -1.59
LRTM1Q9HBL6 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC5.13□□□□□ -1.59
LRTM1Q9HBL6 CCT5-215ENST00000625723 135 ntTSL 5 BASIC5.13□□□□□ -1.59
LRTM1Q9HBL6 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
LRTM1Q9HBL6 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
LRTM1Q9HBL6 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
LRTM1Q9HBL6 Z95331.1-201ENST00000623075 23112 ntBASIC5.13□□□□□ -1.59
LRTM1Q9HBL6 TRIM51GP-201ENST00000534741 1350 ntBASIC5.13□□□□□ -1.59
LRTM1Q9HBL6 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC5.13□□□□□ -1.59
LRTM1Q9HBL6 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.13□□□□□ -1.59
LRTM1Q9HBL6 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
LRTM1Q9HBL6 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
LRTM1Q9HBL6 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
LRTM1Q9HBL6 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
LRTM1Q9HBL6 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
LRTM1Q9HBL6 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.13□□□□□ -1.59
LRTM1Q9HBL6 AP000473.2-201ENST00000602659 1537 ntBASIC5.13□□□□□ -1.59
LRTM1Q9HBL6 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
LRTM1Q9HBL6 AP001284.1-201ENST00000528393 2118 ntBASIC5.12□□□□□ -1.59
LRTM1Q9HBL6 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
LRTM1Q9HBL6 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
LRTM1Q9HBL6 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.12□□□□□ -1.59
LRTM1Q9HBL6 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
LRTM1Q9HBL6 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
LRTM1Q9HBL6 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.12□□□□□ -1.59
LRTM1Q9HBL6 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.12□□□□□ -1.59
LRTM1Q9HBL6 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
LRTM1Q9HBL6 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC5.12□□□□□ -1.59
LRTM1Q9HBL6 PCNPP4-201ENST00000414817 517 ntBASIC5.12□□□□□ -1.59
LRTM1Q9HBL6 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC5.12□□□□□ -1.59
LRTM1Q9HBL6 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
LRTM1Q9HBL6 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
LRTM1Q9HBL6 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC5.12□□□□□ -1.59
LRTM1Q9HBL6 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC5.12□□□□□ -1.59
LRTM1Q9HBL6 AC002504.1-201ENST00000438281 691 ntBASIC5.12□□□□□ -1.59
LRTM1Q9HBL6 AC064862.4-201ENST00000442180 334 ntBASIC5.12□□□□□ -1.59
LRTM1Q9HBL6 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.12□□□□□ -1.59
LRTM1Q9HBL6 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC5.12□□□□□ -1.59
LRTM1Q9HBL6 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.12□□□□□ -1.59
LRTM1Q9HBL6 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
LRTM1Q9HBL6 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
LRTM1Q9HBL6 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC5.12□□□□□ -1.59
LRTM1Q9HBL6 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC5.12□□□□□ -1.59
LRTM1Q9HBL6 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC5.12□□□□□ -1.59
LRTM1Q9HBL6 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC5.12□□□□□ -1.59
LRTM1Q9HBL6 AC106730.2-201ENST00000566641 540 ntBASIC5.12□□□□□ -1.59
LRTM1Q9HBL6 AC020978.7-201ENST00000575953 1187 ntBASIC5.12□□□□□ -1.59
LRTM1Q9HBL6 MIR4489-201ENST00000578869 62 ntBASIC5.12□□□□□ -1.59
LRTM1Q9HBL6 AC060766.1-201ENST00000590824 627 ntBASIC5.12□□□□□ -1.59
LRTM1Q9HBL6 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC5.12□□□□□ -1.59
LRTM1Q9HBL6 AC004948.1-201ENST00000609858 672 ntBASIC5.12□□□□□ -1.59
LRTM1Q9HBL6 AL450345.1-202ENST00000605741 3881 ntBASIC5.12□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 127.8 ms