Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
ALMS1Q8TCU4 STIL-201ENST00000337817 5087 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
ALMS1Q8TCU4 CHD7-203ENST00000525508 4777 ntTSL 5 BASIC3.52□□□□□ -1.85
ALMS1Q8TCU4 GPR161-201ENST00000271357 7806 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
ALMS1Q8TCU4 RNA5-8SP5-201ENST00000365304 152 ntBASIC3.52□□□□□ -1.85
ALMS1Q8TCU4 HMGB3P7-201ENST00000400214 611 ntBASIC3.52□□□□□ -1.85
ALMS1Q8TCU4 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC3.52□□□□□ -1.85
ALMS1Q8TCU4 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC3.52□□□□□ -1.85
ALMS1Q8TCU4 AC083829.1-201ENST00000503756 657 ntBASIC3.52□□□□□ -1.85
ALMS1Q8TCU4 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC3.52□□□□□ -1.85
ALMS1Q8TCU4 AC136777.2-201ENST00000522979 358 ntBASIC3.52□□□□□ -1.85
ALMS1Q8TCU4 BNIP3P22-201ENST00000593399 556 ntBASIC3.52□□□□□ -1.85
ALMS1Q8TCU4 AC006115.2-201ENST00000596823 202 ntBASIC3.52□□□□□ -1.85
ALMS1Q8TCU4 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC3.52□□□□□ -1.85
ALMS1Q8TCU4 HIRAP1-201ENST00000605318 787 ntBASIC3.52□□□□□ -1.85
ALMS1Q8TCU4 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC3.51□□□□□ -1.85
ALMS1Q8TCU4 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
ALMS1Q8TCU4 DDX24-209ENST00000621632 5612 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
ALMS1Q8TCU4 MYOF-201ENST00000358334 6680 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
ALMS1Q8TCU4 OFD1P8Y-201ENST00000449148 1433 ntBASIC3.51□□□□□ -1.85
ALMS1Q8TCU4 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
ALMS1Q8TCU4 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
ALMS1Q8TCU4 NCAM2-202ENST00000400546 8135 ntAPPRIS P2 TSL 1 (best) BASIC3.51□□□□□ -1.85
ALMS1Q8TCU4 STAMBP-201ENST00000339566 6277 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
ALMS1Q8TCU4 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
ALMS1Q8TCU4 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
ALMS1Q8TCU4 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
ALMS1Q8TCU4 RNU1-136P-201ENST00000384181 164 ntBASIC3.51□□□□□ -1.85
ALMS1Q8TCU4 AL592293.2-201ENST00000422292 996 ntBASIC3.51□□□□□ -1.85
ALMS1Q8TCU4 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC3.51□□□□□ -1.85
ALMS1Q8TCU4 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC3.51□□□□□ -1.85
ALMS1Q8TCU4 OR52A4P-201ENST00000472867 958 ntBASIC3.51□□□□□ -1.85
ALMS1Q8TCU4 PPM1AP1-201ENST00000502740 1135 ntBASIC3.51□□□□□ -1.85
ALMS1Q8TCU4 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC3.51□□□□□ -1.85
ALMS1Q8TCU4 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC3.51□□□□□ -1.85
ALMS1Q8TCU4 AGGF1P7-201ENST00000562369 913 ntBASIC3.51□□□□□ -1.85
ALMS1Q8TCU4 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC3.51□□□□□ -1.85
ALMS1Q8TCU4 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
ALMS1Q8TCU4 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
ALMS1Q8TCU4 KCNMA1-266ENST00000639601 11920 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
ALMS1Q8TCU4 CACNB4-239ENST00000636947 5575 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
ALMS1Q8TCU4 PAX8-AS1-202ENST00000422956 11799 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
ALMS1Q8TCU4 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
ALMS1Q8TCU4 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
ALMS1Q8TCU4 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC3.51□□□□□ -1.85
ALMS1Q8TCU4 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC3.51□□□□□ -1.85
ALMS1Q8TCU4 NEK1-208ENST00000512193 4430 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
ALMS1Q8TCU4 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC3.51□□□□□ -1.85
ALMS1Q8TCU4 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC3.51□□□□□ -1.85
ALMS1Q8TCU4 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC3.51□□□□□ -1.85
ALMS1Q8TCU4 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
ALMS1Q8TCU4 RPS29P10-201ENST00000439197 166 ntBASIC3.51□□□□□ -1.85
ALMS1Q8TCU4 AC006967.1-201ENST00000467608 589 ntBASIC3.51□□□□□ -1.85
ALMS1Q8TCU4 AC091167.1-201ENST00000492017 396 ntBASIC3.51□□□□□ -1.85
ALMS1Q8TCU4 OR8G5-201ENST00000524943 1041 ntBASIC3.51□□□□□ -1.85
ALMS1Q8TCU4 AC133555.2-201ENST00000550213 292 ntBASIC3.51□□□□□ -1.85
ALMS1Q8TCU4 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC3.51□□□□□ -1.85
ALMS1Q8TCU4 MIR6830-201ENST00000636015 70 ntBASIC3.51□□□□□ -1.85
ALMS1Q8TCU4 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC3.51□□□□□ -1.85
ALMS1Q8TCU4 CCDC162P-202ENST00000368966 6751 ntBASIC3.51□□□□□ -1.85
ALMS1Q8TCU4 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
ALMS1Q8TCU4 TMCC1-203ENST00000432054 5631 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
ALMS1Q8TCU4 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
ALMS1Q8TCU4 CTNND1-204ENST00000361796 6226 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
ALMS1Q8TCU4 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC3.51□□□□□ -1.85
ALMS1Q8TCU4 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
ALMS1Q8TCU4 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC3.51□□□□□ -1.85
ALMS1Q8TCU4 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC3.51□□□□□ -1.85
ALMS1Q8TCU4 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC3.51□□□□□ -1.85
ALMS1Q8TCU4 GAS5-208ENST00000425771 242 ntTSL 3 BASIC3.51□□□□□ -1.85
ALMS1Q8TCU4 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC3.51□□□□□ -1.85
ALMS1Q8TCU4 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC3.51□□□□□ -1.85
ALMS1Q8TCU4 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC3.51□□□□□ -1.85
ALMS1Q8TCU4 AC006427.1-201ENST00000514359 712 ntBASIC3.51□□□□□ -1.85
ALMS1Q8TCU4 IGKV1-32-201ENST00000519290 311 ntBASIC3.51□□□□□ -1.85
ALMS1Q8TCU4 AL356218.2-201ENST00000605264 187 ntBASIC3.51□□□□□ -1.85
ALMS1Q8TCU4 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC3.51□□□□□ -1.85
ALMS1Q8TCU4 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC3.51□□□□□ -1.85
ALMS1Q8TCU4 OR4F13P-202ENST00000560066 2054 ntBASIC3.51□□□□□ -1.85
ALMS1Q8TCU4 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC3.51□□□□□ -1.85
ALMS1Q8TCU4 KIF13A-205ENST00000378843 5707 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
ALMS1Q8TCU4 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
ALMS1Q8TCU4 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC3.5□□□□□ -1.85
ALMS1Q8TCU4 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
ALMS1Q8TCU4 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
ALMS1Q8TCU4 RNU1-74P-201ENST00000384108 171 ntBASIC3.5□□□□□ -1.85
ALMS1Q8TCU4 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC3.5□□□□□ -1.85
ALMS1Q8TCU4 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC3.5□□□□□ -1.85
ALMS1Q8TCU4 REG1CP-206ENST00000447469 496 ntBASIC3.5□□□□□ -1.85
ALMS1Q8TCU4 NDUFA5P8-201ENST00000449019 346 ntBASIC3.5□□□□□ -1.85
ALMS1Q8TCU4 OR52J1P-201ENST00000450596 932 ntBASIC3.5□□□□□ -1.85
ALMS1Q8TCU4 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC3.5□□□□□ -1.85
ALMS1Q8TCU4 MEMO1P4-201ENST00000453590 386 ntBASIC3.5□□□□□ -1.85
ALMS1Q8TCU4 AL356390.1-201ENST00000455684 397 ntBASIC3.5□□□□□ -1.85
ALMS1Q8TCU4 snoU13.29-201ENST00000459370 104 ntBASIC3.5□□□□□ -1.85
ALMS1Q8TCU4 AC093815.1-201ENST00000508637 280 ntBASIC3.5□□□□□ -1.85
ALMS1Q8TCU4 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC3.5□□□□□ -1.85
ALMS1Q8TCU4 OR11H3P-201ENST00000554547 982 ntBASIC3.5□□□□□ -1.85
ALMS1Q8TCU4 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC3.5□□□□□ -1.85
ALMS1Q8TCU4 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 178.6 ms