Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
DEPDC4Q8N2C3 QRSL1P1-201ENST00000400977 1540 ntBASIC7.2□□□□□ -1.26
DEPDC4Q8N2C3 AL121949.2-201ENST00000403446 1548 ntBASIC7.2□□□□□ -1.26
DEPDC4Q8N2C3 LRMDA-208ENST00000496424 3923 ntTSL 2 BASIC7.2□□□□□ -1.26
DEPDC4Q8N2C3 AL513523.1-201ENST00000417868 1309 ntBASIC7.2□□□□□ -1.26
DEPDC4Q8N2C3 C15orf41-202ENST00000437989 2240 ntAPPRIS P3 TSL 1 (best) BASIC7.2□□□□□ -1.26
DEPDC4Q8N2C3 CACNA2D3-210ENST00000490478 3557 ntAPPRIS ALT2 TSL 1 (best) BASIC7.2□□□□□ -1.26
DEPDC4Q8N2C3 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC7.2□□□□□ -1.26
DEPDC4Q8N2C3 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
DEPDC4Q8N2C3 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC7.2□□□□□ -1.26
DEPDC4Q8N2C3 C3orf30-201ENST00000295622 1814 ntAPPRIS P2 TSL 1 (best) BASIC7.2□□□□□ -1.26
DEPDC4Q8N2C3 MAPK10-241ENST00000639234 2985 ntTSL 5 BASIC7.2□□□□□ -1.26
DEPDC4Q8N2C3 SLC2A3-201ENST00000075120 3915 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
DEPDC4Q8N2C3 GOLGA6L22-204ENST00000622895 4178 ntAPPRIS P5 TSL 5 BASIC7.19□□□□□ -1.26
DEPDC4Q8N2C3 PLCE1-AS2-202ENST00000432782 1612 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
DEPDC4Q8N2C3 BX322650.1-201ENST00000332359 2143 ntBASIC7.19□□□□□ -1.26
DEPDC4Q8N2C3 AL133279.3-201ENST00000563140 2352 ntBASIC7.19□□□□□ -1.26
DEPDC4Q8N2C3 CDC42SE2-208ENST00000505065 4352 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
DEPDC4Q8N2C3 NF1-202ENST00000358273 12425 ntAPPRIS ALT1 TSL 1 (best) BASIC7.19□□□□□ -1.26
DEPDC4Q8N2C3 KAT6B-203ENST00000372714 5892 ntAPPRIS ALT2 TSL 5 BASIC7.19□□□□□ -1.26
DEPDC4Q8N2C3 ADH4-212ENST00000629236 1974 ntTSL 5 BASIC7.19□□□□□ -1.26
DEPDC4Q8N2C3 PDE4B-206ENST00000423207 4546 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
DEPDC4Q8N2C3 MGAM-202ENST00000475668 9172 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
DEPDC4Q8N2C3 HIST1H2BA-201ENST00000274764 516 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
DEPDC4Q8N2C3 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
DEPDC4Q8N2C3 CPSF4L-201ENST00000344935 647 ntAPPRIS P2 TSL 1 (best) BASIC7.19□□□□□ -1.26
DEPDC4Q8N2C3 U8.3-201ENST00000363321 132 ntBASIC7.19□□□□□ -1.26
DEPDC4Q8N2C3 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC7.19□□□□□ -1.26
DEPDC4Q8N2C3 SPRR1A-201ENST00000368762 270 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
DEPDC4Q8N2C3 CSNK2B-202ENST00000375866 936 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
DEPDC4Q8N2C3 RNU6-483P-201ENST00000384088 108 ntBASIC7.19□□□□□ -1.26
DEPDC4Q8N2C3 Y_RNA.481-201ENST00000384373 102 ntBASIC7.19□□□□□ -1.26
DEPDC4Q8N2C3 RPL34-201ENST00000394665 529 ntAPPRIS P1 TSL 2 BASIC7.19□□□□□ -1.26
DEPDC4Q8N2C3 RPL34-202ENST00000394667 441 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
DEPDC4Q8N2C3 AC008171.1-201ENST00000395058 200 ntBASIC7.19□□□□□ -1.26
DEPDC4Q8N2C3 SNRPEP2-201ENST00000397592 279 ntBASIC7.19□□□□□ -1.26
DEPDC4Q8N2C3 RPL31P1-201ENST00000398116 372 ntBASIC7.19□□□□□ -1.26
DEPDC4Q8N2C3 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC7.19□□□□□ -1.26
DEPDC4Q8N2C3 AL031848.1-201ENST00000419034 351 ntTSL 5 BASIC7.19□□□□□ -1.26
DEPDC4Q8N2C3 SNRPEP10-201ENST00000420249 274 ntBASIC7.19□□□□□ -1.26
DEPDC4Q8N2C3 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC7.19□□□□□ -1.26
DEPDC4Q8N2C3 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC7.19□□□□□ -1.26
DEPDC4Q8N2C3 NPM1P34-201ENST00000428821 893 ntBASIC7.19□□□□□ -1.26
DEPDC4Q8N2C3 FCF1P1-201ENST00000432690 571 ntBASIC7.19□□□□□ -1.26
DEPDC4Q8N2C3 HMGN2P24-201ENST00000433516 273 ntBASIC7.19□□□□□ -1.26
DEPDC4Q8N2C3 AL606534.2-201ENST00000436756 624 ntTSL 5 BASIC7.19□□□□□ -1.26
DEPDC4Q8N2C3 AC007790.1-201ENST00000439081 782 ntBASIC7.19□□□□□ -1.26
DEPDC4Q8N2C3 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC7.19□□□□□ -1.26
DEPDC4Q8N2C3 LINC01831-201ENST00000449772 493 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
DEPDC4Q8N2C3 RPS29P16-201ENST00000452798 171 ntBASIC7.19□□□□□ -1.26
DEPDC4Q8N2C3 Z82190.1-201ENST00000454534 490 ntBASIC7.19□□□□□ -1.26
DEPDC4Q8N2C3 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC7.19□□□□□ -1.26
DEPDC4Q8N2C3 CHIAP1-201ENST00000456220 995 ntBASIC7.19□□□□□ -1.26
DEPDC4Q8N2C3 AL390026.1-201ENST00000456647 457 ntBASIC7.19□□□□□ -1.26
DEPDC4Q8N2C3 AL592464.2-201ENST00000457440 607 ntTSL 2 BASIC7.19□□□□□ -1.26
DEPDC4Q8N2C3 RPSAP48-201ENST00000466509 889 ntBASIC7.19□□□□□ -1.26
DEPDC4Q8N2C3 RN7SL241P-201ENST00000482973 236 ntBASIC7.19□□□□□ -1.26
DEPDC4Q8N2C3 RPL22-208ENST00000497965 786 ntTSL 2 BASIC7.19□□□□□ -1.26
DEPDC4Q8N2C3 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC7.19□□□□□ -1.26
DEPDC4Q8N2C3 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC7.19□□□□□ -1.26
DEPDC4Q8N2C3 RCHY1-206ENST00000507014 650 ntTSL 3 BASIC7.19□□□□□ -1.26
DEPDC4Q8N2C3 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC7.19□□□□□ -1.26
DEPDC4Q8N2C3 CCL26-201ENST00000005180 526 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
DEPDC4Q8N2C3 COX6B1P4-201ENST00000519826 484 ntBASIC7.19□□□□□ -1.26
DEPDC4Q8N2C3 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC7.19□□□□□ -1.26
DEPDC4Q8N2C3 MRPL40P1-201ENST00000542687 604 ntBASIC7.19□□□□□ -1.26
DEPDC4Q8N2C3 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC7.19□□□□□ -1.26
DEPDC4Q8N2C3 AC144548.1-201ENST00000549577 324 ntBASIC7.19□□□□□ -1.26
DEPDC4Q8N2C3 EIF4A1P4-201ENST00000550578 1213 ntBASIC7.19□□□□□ -1.26
DEPDC4Q8N2C3 AC004241.1-203ENST00000552502 460 ntTSL 3 BASIC7.19□□□□□ -1.26
DEPDC4Q8N2C3 AC233290.2-201ENST00000552852 390 ntBASIC7.19□□□□□ -1.26
DEPDC4Q8N2C3 AC005230.1-201ENST00000555418 285 ntBASIC7.19□□□□□ -1.26
DEPDC4Q8N2C3 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC7.19□□□□□ -1.26
DEPDC4Q8N2C3 AC027808.2-203ENST00000558261 638 ntTSL 5 BASIC7.19□□□□□ -1.26
DEPDC4Q8N2C3 APOOP5-202ENST00000564761 566 ntBASIC7.19□□□□□ -1.26
DEPDC4Q8N2C3 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC7.19□□□□□ -1.26
DEPDC4Q8N2C3 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC7.19□□□□□ -1.26
DEPDC4Q8N2C3 MTCO3P13-201ENST00000577757 781 ntBASIC7.19□□□□□ -1.26
DEPDC4Q8N2C3 MIR4437-201ENST00000581331 60 ntBASIC7.19□□□□□ -1.26
DEPDC4Q8N2C3 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC7.19□□□□□ -1.26
DEPDC4Q8N2C3 AC005323.1-203ENST00000585303 566 ntTSL 5 BASIC7.19□□□□□ -1.26
DEPDC4Q8N2C3 AC022916.3-201ENST00000592961 742 ntBASIC7.19□□□□□ -1.26
DEPDC4Q8N2C3 ZNF83-210ENST00000597161 509 ntTSL 4 BASIC7.19□□□□□ -1.26
DEPDC4Q8N2C3 U1.22-201ENST00000605806 164 ntBASIC7.19□□□□□ -1.26
DEPDC4Q8N2C3 PART1_1.1-201ENST00000611761 217 ntBASIC7.19□□□□□ -1.26
DEPDC4Q8N2C3 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC7.19□□□□□ -1.26
DEPDC4Q8N2C3 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC7.19□□□□□ -1.26
DEPDC4Q8N2C3 AC245033.3-201ENST00000617986 224 ntBASIC7.19□□□□□ -1.26
DEPDC4Q8N2C3 AC239859.6-201ENST00000622095 213 ntBASIC7.19□□□□□ -1.26
DEPDC4Q8N2C3 AC063952.1-203ENST00000634410 658 ntBASIC7.19□□□□□ -1.26
DEPDC4Q8N2C3 FNDC7-201ENST00000370017 3332 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
DEPDC4Q8N2C3 LINC01630-208ENST00000635680 4363 ntTSL 5 BASIC7.19□□□□□ -1.26
DEPDC4Q8N2C3 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC7.19□□□□□ -1.26
DEPDC4Q8N2C3 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC7.19□□□□□ -1.26
DEPDC4Q8N2C3 PDGFC-203ENST00000502773 4165 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
DEPDC4Q8N2C3 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
DEPDC4Q8N2C3 AC008147.2-201ENST00000552061 4713 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
DEPDC4Q8N2C3 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
DEPDC4Q8N2C3 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC7.19□□□□□ -1.26
DEPDC4Q8N2C3 CDY2A-202ENST00000426790 2369 ntAPPRIS P5 TSL 5 BASIC7.19□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms