Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 HMGB1P7-201ENST00000450921 612 ntBASIC8.53□□□□□ -1.04
RC3H1Q5TC82 RN7SL254P-201ENST00000460609 284 ntBASIC8.53□□□□□ -1.04
RC3H1Q5TC82 RPL5P13-201ENST00000462840 709 ntBASIC8.53□□□□□ -1.04
RC3H1Q5TC82 AC011979.1-201ENST00000472300 483 ntBASIC8.53□□□□□ -1.04
RC3H1Q5TC82 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC8.53□□□□□ -1.04
RC3H1Q5TC82 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC8.53□□□□□ -1.04
RC3H1Q5TC82 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC8.53□□□□□ -1.04
RC3H1Q5TC82 HSPE1P23-201ENST00000509838 286 ntBASIC8.53□□□□□ -1.04
RC3H1Q5TC82 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
RC3H1Q5TC82 AC021733.2-201ENST00000518830 497 ntBASIC8.53□□□□□ -1.04
RC3H1Q5TC82 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC8.53□□□□□ -1.04
RC3H1Q5TC82 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC8.53□□□□□ -1.04
RC3H1Q5TC82 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC8.53□□□□□ -1.04
RC3H1Q5TC82 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC8.53□□□□□ -1.04
RC3H1Q5TC82 AC005261.5-201ENST00000596280 355 ntBASIC8.53□□□□□ -1.04
RC3H1Q5TC82 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC8.53□□□□□ -1.04
RC3H1Q5TC82 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
RC3H1Q5TC82 AL442067.2-201ENST00000614033 363 ntBASIC8.53□□□□□ -1.04
RC3H1Q5TC82 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC8.53□□□□□ -1.04
RC3H1Q5TC82 TEX41-256ENST00000626411 368 ntTSL 5 BASIC8.53□□□□□ -1.04
RC3H1Q5TC82 SP140-205ENST00000420434 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
RC3H1Q5TC82 AC006213.1-202ENST00000589021 2176 ntTSL 2 BASIC8.53□□□□□ -1.04
RC3H1Q5TC82 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
RC3H1Q5TC82 TCF12-213ENST00000559703 1544 ntTSL 5 BASIC8.53□□□□□ -1.04
RC3H1Q5TC82 SLC22A9-201ENST00000279178 2343 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
RC3H1Q5TC82 ADAMTS6-203ENST00000381055 7311 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
RC3H1Q5TC82 RASGRP3-203ENST00000407811 4210 ntAPPRIS ALT1 TSL 1 (best) BASIC8.53□□□□□ -1.04
RC3H1Q5TC82 GRPR-201ENST00000380289 1929 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.04
RC3H1Q5TC82 AP002001.2-201ENST00000529025 1469 ntBASIC8.52□□□□□ -1.05
RC3H1Q5TC82 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC8.52□□□□□ -1.05
RC3H1Q5TC82 ADGRL3-209ENST00000508693 5009 ntTSL 5 BASIC8.52□□□□□ -1.05
RC3H1Q5TC82 OTX2-AS1-201ENST00000534909 2428 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
RC3H1Q5TC82 TRAM2-201ENST00000182527 6908 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
RC3H1Q5TC82 PDE1A-201ENST00000351439 2338 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
RC3H1Q5TC82 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC8.52□□□□□ -1.05
RC3H1Q5TC82 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC8.52□□□□□ -1.05
RC3H1Q5TC82 AC135012.3-201ENST00000599841 4039 ntTSL 4 BASIC8.52□□□□□ -1.05
RC3H1Q5TC82 RSPH4A-201ENST00000229554 2825 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
RC3H1Q5TC82 KCNA2-214ENST00000640774 6673 ntTSL 5 BASIC8.52□□□□□ -1.05
RC3H1Q5TC82 RAI14-208ENST00000506376 3091 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
RC3H1Q5TC82 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC8.52□□□□□ -1.05
RC3H1Q5TC82 Y_RNA.9-201ENST00000362354 101 ntBASIC8.52□□□□□ -1.05
RC3H1Q5TC82 RN7SKP226-201ENST00000364912 300 ntBASIC8.52□□□□□ -1.05
RC3H1Q5TC82 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC8.52□□□□□ -1.05
RC3H1Q5TC82 AL035419.1-201ENST00000397037 564 ntBASIC8.52□□□□□ -1.05
RC3H1Q5TC82 AL663061.1-201ENST00000416625 580 ntBASIC8.52□□□□□ -1.05
RC3H1Q5TC82 AL929472.1-201ENST00000417484 429 ntBASIC8.52□□□□□ -1.05
RC3H1Q5TC82 PMS2P3-203ENST00000422064 567 ntTSL 5 BASIC8.52□□□□□ -1.05
RC3H1Q5TC82 AC083862.1-201ENST00000427378 1242 ntBASIC8.52□□□□□ -1.05
RC3H1Q5TC82 TRAPPC2P8-201ENST00000440676 396 ntBASIC8.52□□□□□ -1.05
RC3H1Q5TC82 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC8.52□□□□□ -1.05
RC3H1Q5TC82 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC8.52□□□□□ -1.05
RC3H1Q5TC82 AC093019.1-201ENST00000443135 252 ntBASIC8.52□□□□□ -1.05
RC3H1Q5TC82 RPL7L1P11-201ENST00000446092 721 ntBASIC8.52□□□□□ -1.05
RC3H1Q5TC82 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC8.52□□□□□ -1.05
RC3H1Q5TC82 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC8.52□□□□□ -1.05
RC3H1Q5TC82 ATP5A1P7-201ENST00000453978 1279 ntBASIC8.52□□□□□ -1.05
RC3H1Q5TC82 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC8.52□□□□□ -1.05
RC3H1Q5TC82 AC013828.1-201ENST00000481845 158 ntBASIC8.52□□□□□ -1.05
RC3H1Q5TC82 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
RC3H1Q5TC82 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC8.52□□□□□ -1.05
RC3H1Q5TC82 CYCSP25-201ENST00000525280 316 ntBASIC8.52□□□□□ -1.05
RC3H1Q5TC82 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC8.52□□□□□ -1.05
RC3H1Q5TC82 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC8.52□□□□□ -1.05
RC3H1Q5TC82 OR4A40P-201ENST00000533878 948 ntBASIC8.52□□□□□ -1.05
RC3H1Q5TC82 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC8.52□□□□□ -1.05
RC3H1Q5TC82 SMARCE1P3-201ENST00000553649 1231 ntBASIC8.52□□□□□ -1.05
RC3H1Q5TC82 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC8.52□□□□□ -1.05
RC3H1Q5TC82 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC8.52□□□□□ -1.05
RC3H1Q5TC82 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC8.52□□□□□ -1.05
RC3H1Q5TC82 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC8.52□□□□□ -1.05
RC3H1Q5TC82 GLYATL1P2-202ENST00000588046 902 ntBASIC8.52□□□□□ -1.05
RC3H1Q5TC82 AL392112.1-201ENST00000605115 829 ntBASIC8.52□□□□□ -1.05
RC3H1Q5TC82 TMEM192-201ENST00000306480 10012 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
RC3H1Q5TC82 CD200R1-202ENST00000308611 2299 ntAPPRIS P4 TSL 1 (best) BASIC8.52□□□□□ -1.05
RC3H1Q5TC82 BRD7P1-201ENST00000557705 1915 ntBASIC8.52□□□□□ -1.05
RC3H1Q5TC82 Z97989.1-201ENST00000531702 2421 ntBASIC8.52□□□□□ -1.05
RC3H1Q5TC82 AADACL3-201ENST00000359318 3662 ntAPPRIS P1 TSL 3 BASIC8.52□□□□□ -1.05
RC3H1Q5TC82 C14orf105-201ENST00000216445 3082 ntAPPRIS P3 TSL 1 (best) BASIC8.52□□□□□ -1.05
RC3H1Q5TC82 F13A1-201ENST00000264870 3999 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
RC3H1Q5TC82 AKAP17BP-201ENST00000431706 2719 ntBASIC8.52□□□□□ -1.05
RC3H1Q5TC82 GCNT3-201ENST00000396065 4933 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
RC3H1Q5TC82 AC005614.1-201ENST00000598952 3653 ntBASIC8.51□□□□□ -1.05
RC3H1Q5TC82 LINC01559-201ENST00000318426 2750 ntTSL 2 BASIC8.51□□□□□ -1.05
RC3H1Q5TC82 EZH1-222ENST00000592743 2501 ntAPPRIS P1 TSL 2 BASIC8.51□□□□□ -1.05
RC3H1Q5TC82 BRD8-201ENST00000230901 3198 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
RC3H1Q5TC82 POU2F3-201ENST00000260264 2903 ntTSL 2 BASIC8.51□□□□□ -1.05
RC3H1Q5TC82 MRPS18C-201ENST00000295491 1643 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
RC3H1Q5TC82 CA10-204ENST00000570565 2276 ntTSL 5 BASIC8.51□□□□□ -1.05
RC3H1Q5TC82 AC015871.4-201ENST00000624650 2260 ntBASIC8.51□□□□□ -1.05
RC3H1Q5TC82 IL5RA-201ENST00000256452 2001 ntAPPRIS P4 TSL 1 (best) BASIC8.51□□□□□ -1.05
RC3H1Q5TC82 CD109-203ENST00000437994 9401 ntAPPRIS ALT1 TSL 1 (best) BASIC8.51□□□□□ -1.05
RC3H1Q5TC82 AC006141.1-201ENST00000581917 2170 ntBASIC8.51□□□□□ -1.05
RC3H1Q5TC82 KAT6B-205ENST00000372725 6944 ntAPPRIS ALT2 TSL 5 BASIC8.51□□□□□ -1.05
RC3H1Q5TC82 EPS8-213ENST00000543612 2965 ntAPPRIS P1 TSL 2 BASIC8.51□□□□□ -1.05
RC3H1Q5TC82 RALBP1-206ENST00000609094 3676 ntTSL 2 BASIC8.51□□□□□ -1.05
RC3H1Q5TC82 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC8.51□□□□□ -1.05
RC3H1Q5TC82 CCR8-201ENST00000326306 1253 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
RC3H1Q5TC82 ARGFX-201ENST00000334384 992 ntAPPRIS P1 TSL 3 BASIC8.51□□□□□ -1.05
RC3H1Q5TC82 FASLG-201ENST00000340030 917 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Retrieved 100 of 98,524 protein–RNA pairs in 89.2 ms