Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 GRAMD2B-212ENST00000513040 2196 ntTSL 2 BASIC6.85□□□□□ -1.31
RSPO4Q2I0M5 OR9Q1-201ENST00000335397 2488 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
RSPO4Q2I0M5 NAT10-205ENST00000531159 3436 ntAPPRIS ALT2 TSL 2 BASIC6.85□□□□□ -1.31
RSPO4Q2I0M5 AL353795.1-201ENST00000439134 1775 ntBASIC6.85□□□□□ -1.31
RSPO4Q2I0M5 HRH1-203ENST00000431010 4278 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
RSPO4Q2I0M5 CACNA1D-201ENST00000288139 9341 ntAPPRIS P3 TSL 1 (best) BASIC6.84□□□□□ -1.31
RSPO4Q2I0M5 PKIA-AS1-202ENST00000522302 2011 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
RSPO4Q2I0M5 NRCAM-204ENST00000379028 6685 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.31
RSPO4Q2I0M5 TRIM66-202ENST00000402157 10086 ntAPPRIS P5 TSL 5 BASIC6.84□□□□□ -1.31
RSPO4Q2I0M5 AC090983.1-201ENST00000623426 3897 ntBASIC6.84□□□□□ -1.31
RSPO4Q2I0M5 SERPINB13-201ENST00000269489 3206 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
RSPO4Q2I0M5 NEDD9-208ENST00000504387 3211 ntAPPRIS ALT2 TSL 2 BASIC6.84□□□□□ -1.31
RSPO4Q2I0M5 BDNF-213ENST00000525950 3829 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
RSPO4Q2I0M5 AC017007.4-201ENST00000503353 1352 ntBASIC6.84□□□□□ -1.31
RSPO4Q2I0M5 AP003471.1-202ENST00000319051 1988 ntBASIC6.84□□□□□ -1.31
RSPO4Q2I0M5 MAPRE2-203ENST00000436190 4323 ntTSL 2 BASIC6.84□□□□□ -1.31
RSPO4Q2I0M5 PPARA-203ENST00000407236 9995 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
RSPO4Q2I0M5 AL359263.1-201ENST00000441188 2796 ntBASIC6.84□□□□□ -1.31
RSPO4Q2I0M5 BTBD10-210ENST00000530907 1871 ntAPPRIS ALT1 TSL 2 BASIC6.84□□□□□ -1.31
RSPO4Q2I0M5 DUBR-202ENST00000466734 2737 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
RSPO4Q2I0M5 TTTY15-202ENST00000440408 5284 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
RSPO4Q2I0M5 KLRD1-201ENST00000336164 3258 ntAPPRIS P4 TSL 1 (best) BASIC6.84□□□□□ -1.31
RSPO4Q2I0M5 OR5P1P-201ENST00000299512 925 ntBASIC6.84□□□□□ -1.31
RSPO4Q2I0M5 NBR1-201ENST00000341165 4656 ntAPPRIS P3 TSL 1 (best) BASIC6.84□□□□□ -1.31
RSPO4Q2I0M5 RNA5SP485-201ENST00000365053 119 ntBASIC6.84□□□□□ -1.31
RSPO4Q2I0M5 Y_RNA.422-201ENST00000384054 114 ntBASIC6.84□□□□□ -1.31
RSPO4Q2I0M5 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
RSPO4Q2I0M5 RNU6-932P-201ENST00000391108 106 ntBASIC6.84□□□□□ -1.31
RSPO4Q2I0M5 AC004386.1-201ENST00000393214 761 ntBASIC6.84□□□□□ -1.31
RSPO4Q2I0M5 AC007068.1-201ENST00000396690 844 ntBASIC6.84□□□□□ -1.31
RSPO4Q2I0M5 RPS3AP23-201ENST00000401762 784 ntBASIC6.84□□□□□ -1.31
RSPO4Q2I0M5 NCSTNP1-201ENST00000406229 144 ntBASIC6.84□□□□□ -1.31
RSPO4Q2I0M5 AP000357.1-201ENST00000409926 1165 ntBASIC6.84□□□□□ -1.31
RSPO4Q2I0M5 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC6.84□□□□□ -1.31
RSPO4Q2I0M5 AL445430.2-201ENST00000423149 686 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
RSPO4Q2I0M5 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC6.84□□□□□ -1.31
RSPO4Q2I0M5 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC6.84□□□□□ -1.31
RSPO4Q2I0M5 AC018644.1-201ENST00000429934 551 ntBASIC6.84□□□□□ -1.31
RSPO4Q2I0M5 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC6.84□□□□□ -1.31
RSPO4Q2I0M5 ATP6V1G1P4-201ENST00000438388 335 ntBASIC6.84□□□□□ -1.31
RSPO4Q2I0M5 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC6.84□□□□□ -1.31
RSPO4Q2I0M5 RPS4XP4-201ENST00000443195 763 ntBASIC6.84□□□□□ -1.31
RSPO4Q2I0M5 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC6.84□□□□□ -1.31
RSPO4Q2I0M5 RPL21P134-201ENST00000453468 483 ntBASIC6.84□□□□□ -1.31
RSPO4Q2I0M5 ATP5A1P7-201ENST00000453978 1279 ntBASIC6.84□□□□□ -1.31
RSPO4Q2I0M5 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC6.84□□□□□ -1.31
RSPO4Q2I0M5 RN7SL160P-201ENST00000468558 284 ntBASIC6.84□□□□□ -1.31
RSPO4Q2I0M5 RN7SL751P-201ENST00000473281 284 ntBASIC6.84□□□□□ -1.31
RSPO4Q2I0M5 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC6.84□□□□□ -1.31
RSPO4Q2I0M5 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC6.84□□□□□ -1.31
RSPO4Q2I0M5 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
RSPO4Q2I0M5 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC6.84□□□□□ -1.31
RSPO4Q2I0M5 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC6.84□□□□□ -1.31
RSPO4Q2I0M5 RNA5SP318-201ENST00000516352 92 ntBASIC6.84□□□□□ -1.31
RSPO4Q2I0M5 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC6.84□□□□□ -1.31
RSPO4Q2I0M5 IGHVIII-38-1-201ENST00000521454 282 ntBASIC6.84□□□□□ -1.31
RSPO4Q2I0M5 AC027026.1-201ENST00000532323 742 ntBASIC6.84□□□□□ -1.31
RSPO4Q2I0M5 AC005519.1-201ENST00000554490 601 ntBASIC6.84□□□□□ -1.31
RSPO4Q2I0M5 AL049830.4-201ENST00000555149 351 ntBASIC6.84□□□□□ -1.31
RSPO4Q2I0M5 AC090826.1-203ENST00000569235 490 ntBASIC6.84□□□□□ -1.31
RSPO4Q2I0M5 AC015853.3-201ENST00000570974 478 ntTSL 4 BASIC6.84□□□□□ -1.31
RSPO4Q2I0M5 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC6.84□□□□□ -1.31
RSPO4Q2I0M5 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC6.84□□□□□ -1.31
RSPO4Q2I0M5 AL109918.3-201ENST00000603072 338 ntBASIC6.84□□□□□ -1.31
RSPO4Q2I0M5 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC6.84□□□□□ -1.31
RSPO4Q2I0M5 AC063962.1-201ENST00000608199 521 ntBASIC6.84□□□□□ -1.31
RSPO4Q2I0M5 AL512624.1-201ENST00000613638 469 ntBASIC6.84□□□□□ -1.31
RSPO4Q2I0M5 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC6.84□□□□□ -1.31
RSPO4Q2I0M5 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC6.84□□□□□ -1.31
RSPO4Q2I0M5 ABBA01000935.2-201ENST00000637477 838 ntBASIC6.84□□□□□ -1.31
RSPO4Q2I0M5 TP63-201ENST00000264731 4909 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
RSPO4Q2I0M5 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.31
RSPO4Q2I0M5 ERBB3-221ENST00000553131 3237 ntTSL 2 BASIC6.84□□□□□ -1.31
RSPO4Q2I0M5 LINC01814-202ENST00000454224 8839 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
RSPO4Q2I0M5 ZNF716-201ENST00000420713 5197 ntAPPRIS P1 TSL 4 BASIC6.84□□□□□ -1.31
RSPO4Q2I0M5 TMX2-202ENST00000378312 1521 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
RSPO4Q2I0M5 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
RSPO4Q2I0M5 KIAA0391-203ENST00000534898 2611 ntAPPRIS P3 TSL 1 (best) BASIC6.84□□□□□ -1.31
RSPO4Q2I0M5 CEBPZOS-204ENST00000402297 3158 ntAPPRIS P1 TSL 2 BASIC6.84□□□□□ -1.31
RSPO4Q2I0M5 LDAH-209ENST00000440866 3728 ntTSL 2 BASIC6.84□□□□□ -1.31
RSPO4Q2I0M5 RAD18-201ENST00000264926 5886 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
RSPO4Q2I0M5 AC090643.1-201ENST00000623600 3100 ntBASIC6.84□□□□□ -1.31
RSPO4Q2I0M5 AC104966.1-201ENST00000467010 1464 ntBASIC6.84□□□□□ -1.31
RSPO4Q2I0M5 ARPP21-207ENST00000417925 3086 ntTSL 2 BASIC6.84□□□□□ -1.31
RSPO4Q2I0M5 ZNF90P1-201ENST00000480493 1951 ntBASIC6.84□□□□□ -1.32
RSPO4Q2I0M5 DIO2-210ENST00000557010 6367 ntAPPRIS P1 TSL 2 BASIC6.84□□□□□ -1.32
RSPO4Q2I0M5 OR4G11P-202ENST00000642116 1414 ntBASIC6.84□□□□□ -1.32
RSPO4Q2I0M5 AC092999.1-201ENST00000624004 1924 ntBASIC6.84□□□□□ -1.32
RSPO4Q2I0M5 TNFRSF19-203ENST00000382263 4151 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
RSPO4Q2I0M5 PPP1R11-206ENST00000376773 1640 ntTSL 3 BASIC6.83□□□□□ -1.32
RSPO4Q2I0M5 OR2H2-202ENST00000641840 3061 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
RSPO4Q2I0M5 ZNF544-206ENST00000596652 2818 ntAPPRIS P3 TSL 1 (best) BASIC6.83□□□□□ -1.32
RSPO4Q2I0M5 ZNF544-217ENST00000600220 2837 ntAPPRIS ALT2 TSL 3 BASIC6.83□□□□□ -1.32
RSPO4Q2I0M5 VANGL1-202ENST00000355485 8691 ntAPPRIS P3 TSL 1 (best) BASIC6.83□□□□□ -1.32
RSPO4Q2I0M5 SEC31A-207ENST00000443462 4042 ntTSL 2 BASIC6.83□□□□□ -1.32
RSPO4Q2I0M5 HDAC9-201ENST00000401921 3254 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
RSPO4Q2I0M5 OR10A2-202ENST00000641461 5390 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
RSPO4Q2I0M5 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC6.83□□□□□ -1.32
RSPO4Q2I0M5 ATF6-201ENST00000367942 7496 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
RSPO4Q2I0M5 LINC02431-202ENST00000505329 1788 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms