Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC4.16□□□□□ -1.74
HIST1H1AQ02539 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC4.16□□□□□ -1.74
HIST1H1AQ02539 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC4.16□□□□□ -1.74
HIST1H1AQ02539 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC4.16□□□□□ -1.74
HIST1H1AQ02539 HSPE1P2-201ENST00000554777 306 ntBASIC4.16□□□□□ -1.74
HIST1H1AQ02539 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC4.16□□□□□ -1.74
HIST1H1AQ02539 AC063977.5-201ENST00000601044 974 ntBASIC4.16□□□□□ -1.74
HIST1H1AQ02539 AC009779.8-202ENST00000607990 932 ntBASIC4.16□□□□□ -1.74
HIST1H1AQ02539 MIR6071-201ENST00000616741 78 ntBASIC4.16□□□□□ -1.74
HIST1H1AQ02539 AC091932.2-201ENST00000623014 291 ntBASIC4.16□□□□□ -1.74
HIST1H1AQ02539 5S_rRNA.28-201ENST00000638107 119 ntBASIC4.16□□□□□ -1.74
HIST1H1AQ02539 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
HIST1H1AQ02539 AL596275.2-207ENST00000641188 675 ntBASIC4.16□□□□□ -1.74
HIST1H1AQ02539 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
HIST1H1AQ02539 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.16□□□□□ -1.74
HIST1H1AQ02539 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.16□□□□□ -1.74
HIST1H1AQ02539 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
HIST1H1AQ02539 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
HIST1H1AQ02539 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
HIST1H1AQ02539 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
HIST1H1AQ02539 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC4.15□□□□□ -1.74
HIST1H1AQ02539 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC4.15□□□□□ -1.74
HIST1H1AQ02539 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
HIST1H1AQ02539 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.74
HIST1H1AQ02539 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
HIST1H1AQ02539 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC4.15□□□□□ -1.74
HIST1H1AQ02539 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
HIST1H1AQ02539 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC4.15□□□□□ -1.74
HIST1H1AQ02539 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
HIST1H1AQ02539 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.74
HIST1H1AQ02539 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
HIST1H1AQ02539 SCN1A-220ENST00000641603 12506 ntBASIC4.15□□□□□ -1.74
HIST1H1AQ02539 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
HIST1H1AQ02539 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC4.15□□□□□ -1.74
HIST1H1AQ02539 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
HIST1H1AQ02539 MIR375-201ENST00000362103 64 ntBASIC4.15□□□□□ -1.75
HIST1H1AQ02539 RN7SKP187-201ENST00000365536 330 ntBASIC4.15□□□□□ -1.75
HIST1H1AQ02539 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC4.15□□□□□ -1.75
HIST1H1AQ02539 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
HIST1H1AQ02539 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
HIST1H1AQ02539 MIR137-201ENST00000385223 102 ntBASIC4.15□□□□□ -1.75
HIST1H1AQ02539 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
HIST1H1AQ02539 OR7E101P-201ENST00000400428 513 ntBASIC4.15□□□□□ -1.75
HIST1H1AQ02539 AL078599.1-201ENST00000402075 293 ntBASIC4.15□□□□□ -1.75
HIST1H1AQ02539 RANP7-201ENST00000418085 644 ntBASIC4.15□□□□□ -1.75
HIST1H1AQ02539 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC4.15□□□□□ -1.75
HIST1H1AQ02539 AC066692.1-201ENST00000421721 457 ntBASIC4.15□□□□□ -1.75
HIST1H1AQ02539 AC127526.2-201ENST00000426436 775 ntBASIC4.15□□□□□ -1.75
HIST1H1AQ02539 RPL7AP49-201ENST00000429522 581 ntBASIC4.15□□□□□ -1.75
HIST1H1AQ02539 AL591438.1-201ENST00000433508 581 ntBASIC4.15□□□□□ -1.75
HIST1H1AQ02539 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC4.15□□□□□ -1.75
HIST1H1AQ02539 AC016772.1-201ENST00000444170 1261 ntBASIC4.15□□□□□ -1.75
HIST1H1AQ02539 AP006222.1-205ENST00000450734 457 ntBASIC4.15□□□□□ -1.75
HIST1H1AQ02539 AL359839.1-201ENST00000451975 1160 ntBASIC4.15□□□□□ -1.75
HIST1H1AQ02539 AL358876.1-201ENST00000453364 1075 ntBASIC4.15□□□□□ -1.75
HIST1H1AQ02539 RPS6P2-201ENST00000454208 705 ntBASIC4.15□□□□□ -1.75
HIST1H1AQ02539 AZGP1P2-201ENST00000454506 345 ntBASIC4.15□□□□□ -1.75
HIST1H1AQ02539 RN7SL168P-201ENST00000463821 279 ntBASIC4.15□□□□□ -1.75
HIST1H1AQ02539 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
HIST1H1AQ02539 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC4.15□□□□□ -1.75
HIST1H1AQ02539 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC4.15□□□□□ -1.75
HIST1H1AQ02539 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC4.15□□□□□ -1.75
HIST1H1AQ02539 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC4.15□□□□□ -1.75
HIST1H1AQ02539 AP000648.1-201ENST00000529682 397 ntBASIC4.15□□□□□ -1.75
HIST1H1AQ02539 TRIM51DP-201ENST00000529746 596 ntBASIC4.15□□□□□ -1.75
HIST1H1AQ02539 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC4.15□□□□□ -1.75
HIST1H1AQ02539 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC4.15□□□□□ -1.75
HIST1H1AQ02539 AC008126.1-201ENST00000549019 480 ntBASIC4.15□□□□□ -1.75
HIST1H1AQ02539 AC079600.1-201ENST00000550326 297 ntBASIC4.15□□□□□ -1.75
HIST1H1AQ02539 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
HIST1H1AQ02539 RN7SL290P-201ENST00000578661 300 ntBASIC4.15□□□□□ -1.75
HIST1H1AQ02539 RN7SL435P-201ENST00000584418 282 ntBASIC4.15□□□□□ -1.75
HIST1H1AQ02539 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC4.15□□□□□ -1.75
HIST1H1AQ02539 AL138895.2-201ENST00000603019 178 ntBASIC4.15□□□□□ -1.75
HIST1H1AQ02539 AL031601.1-201ENST00000605702 394 ntBASIC4.15□□□□□ -1.75
HIST1H1AQ02539 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC4.15□□□□□ -1.75
HIST1H1AQ02539 RN7SL544P-201ENST00000617232 284 ntBASIC4.15□□□□□ -1.75
HIST1H1AQ02539 RN7SL763P-201ENST00000620922 284 ntBASIC4.15□□□□□ -1.75
HIST1H1AQ02539 FO681491.1-202ENST00000623392 737 ntBASIC4.15□□□□□ -1.75
HIST1H1AQ02539 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC4.15□□□□□ -1.75
HIST1H1AQ02539 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC4.15□□□□□ -1.75
HIST1H1AQ02539 LINC01963-201ENST00000562038 3148 ntBASIC4.15□□□□□ -1.75
HIST1H1AQ02539 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.15□□□□□ -1.75
HIST1H1AQ02539 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
HIST1H1AQ02539 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
HIST1H1AQ02539 Z95327.2-201ENST00000414579 1873 ntBASIC4.15□□□□□ -1.75
HIST1H1AQ02539 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.15□□□□□ -1.75
HIST1H1AQ02539 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.15□□□□□ -1.75
HIST1H1AQ02539 MRE11P1-201ENST00000464884 2127 ntBASIC4.15□□□□□ -1.75
HIST1H1AQ02539 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.75
HIST1H1AQ02539 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
HIST1H1AQ02539 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.14□□□□□ -1.75
HIST1H1AQ02539 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC4.14□□□□□ -1.75
HIST1H1AQ02539 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
HIST1H1AQ02539 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
HIST1H1AQ02539 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
HIST1H1AQ02539 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
HIST1H1AQ02539 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
HIST1H1AQ02539 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC4.14□□□□□ -1.75
HIST1H1AQ02539 AL162456.1-201ENST00000634535 2006 ntBASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 118.3 ms