Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 MIR130A-201ENST00000385274 89 ntBASIC5.14□□□□□ -1.59
CDH11P55287 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
CDH11P55287 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
CDH11P55287 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC5.14□□□□□ -1.59
CDH11P55287 AC096921.1-201ENST00000411661 375 ntBASIC5.14□□□□□ -1.59
CDH11P55287 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC5.14□□□□□ -1.59
CDH11P55287 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC5.14□□□□□ -1.59
CDH11P55287 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.14□□□□□ -1.59
CDH11P55287 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC5.14□□□□□ -1.59
CDH11P55287 BX119321.1-201ENST00000428912 797 ntBASIC5.14□□□□□ -1.59
CDH11P55287 AC074367.1-201ENST00000438685 1125 ntBASIC5.14□□□□□ -1.59
CDH11P55287 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC5.14□□□□□ -1.59
CDH11P55287 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC5.14□□□□□ -1.59
CDH11P55287 RPL36AP39-201ENST00000445859 318 ntBASIC5.14□□□□□ -1.59
CDH11P55287 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC5.14□□□□□ -1.59
CDH11P55287 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC5.14□□□□□ -1.59
CDH11P55287 RPS23P2-201ENST00000463671 415 ntBASIC5.14□□□□□ -1.59
CDH11P55287 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC5.14□□□□□ -1.59
CDH11P55287 DUTP1-201ENST00000493631 470 ntBASIC5.14□□□□□ -1.59
CDH11P55287 GAPDHP71-201ENST00000511530 1003 ntBASIC5.14□□□□□ -1.59
CDH11P55287 RNU6-491P-201ENST00000516099 110 ntBASIC5.14□□□□□ -1.59
CDH11P55287 SNORA70.20-201ENST00000516848 126 ntBASIC5.14□□□□□ -1.59
CDH11P55287 SEC11B-201ENST00000518383 499 ntBASIC5.14□□□□□ -1.59
CDH11P55287 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC5.14□□□□□ -1.59
CDH11P55287 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC5.14□□□□□ -1.59
CDH11P55287 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CDH11P55287 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.14□□□□□ -1.59
CDH11P55287 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC5.14□□□□□ -1.59
CDH11P55287 AC009852.2-201ENST00000567898 485 ntBASIC5.14□□□□□ -1.59
CDH11P55287 AC006363.1-201ENST00000603806 463 ntBASIC5.14□□□□□ -1.59
CDH11P55287 AL139124.1-201ENST00000609123 421 ntBASIC5.14□□□□□ -1.59
CDH11P55287 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.14□□□□□ -1.59
CDH11P55287 AL512506.1-201ENST00000613918 449 ntBASIC5.14□□□□□ -1.59
CDH11P55287 AL162574.1-201ENST00000615702 950 ntBASIC5.14□□□□□ -1.59
CDH11P55287 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CDH11P55287 AC126175.1-201ENST00000617041 758 ntBASIC5.14□□□□□ -1.59
CDH11P55287 AC253576.2-201ENST00000618815 580 ntBASIC5.14□□□□□ -1.59
CDH11P55287 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC5.14□□□□□ -1.59
CDH11P55287 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.14□□□□□ -1.59
CDH11P55287 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.14□□□□□ -1.59
CDH11P55287 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.14□□□□□ -1.59
CDH11P55287 PDZK1P1-202ENST00000425209 1350 ntBASIC5.14□□□□□ -1.59
CDH11P55287 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CDH11P55287 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
CDH11P55287 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.14□□□□□ -1.59
CDH11P55287 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CDH11P55287 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CDH11P55287 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.13□□□□□ -1.59
CDH11P55287 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.13□□□□□ -1.59
CDH11P55287 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.13□□□□□ -1.59
CDH11P55287 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CDH11P55287 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
CDH11P55287 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
CDH11P55287 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
CDH11P55287 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.13□□□□□ -1.59
CDH11P55287 AC012078.1-201ENST00000405035 1646 ntBASIC5.13□□□□□ -1.59
CDH11P55287 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC5.13□□□□□ -1.59
CDH11P55287 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CDH11P55287 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
CDH11P55287 RN7SKP292-201ENST00000365522 317 ntBASIC5.13□□□□□ -1.59
CDH11P55287 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC5.13□□□□□ -1.59
CDH11P55287 RNA5SP187-201ENST00000384400 119 ntBASIC5.13□□□□□ -1.59
CDH11P55287 AC005042.1-201ENST00000393397 800 ntBASIC5.13□□□□□ -1.59
CDH11P55287 AC007068.1-201ENST00000396690 844 ntBASIC5.13□□□□□ -1.59
CDH11P55287 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.13□□□□□ -1.59
CDH11P55287 AL512422.1-201ENST00000407033 553 ntBASIC5.13□□□□□ -1.59
CDH11P55287 RN7SKP206-201ENST00000410823 293 ntBASIC5.13□□□□□ -1.59
CDH11P55287 RN7SKP286-201ENST00000410894 299 ntBASIC5.13□□□□□ -1.59
CDH11P55287 CHEK2P5-201ENST00000423877 246 ntBASIC5.13□□□□□ -1.59
CDH11P55287 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC5.13□□□□□ -1.59
CDH11P55287 MTND4LP14-201ENST00000429447 288 ntBASIC5.13□□□□□ -1.59
CDH11P55287 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC5.13□□□□□ -1.59
CDH11P55287 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC5.13□□□□□ -1.59
CDH11P55287 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC5.13□□□□□ -1.59
CDH11P55287 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC5.13□□□□□ -1.59
CDH11P55287 ZNF736P11Y-201ENST00000442535 1213 ntBASIC5.13□□□□□ -1.59
CDH11P55287 ZNF736P12Y-201ENST00000443152 1243 ntBASIC5.13□□□□□ -1.59
CDH11P55287 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC5.13□□□□□ -1.59
CDH11P55287 HMGN1P36-201ENST00000446623 298 ntBASIC5.13□□□□□ -1.59
CDH11P55287 ZNF736P4Y-201ENST00000454995 1243 ntBASIC5.13□□□□□ -1.59
CDH11P55287 AC105918.1-201ENST00000474399 838 ntBASIC5.13□□□□□ -1.59
CDH11P55287 AC099521.1-201ENST00000482557 334 ntBASIC5.13□□□□□ -1.59
CDH11P55287 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.13□□□□□ -1.59
CDH11P55287 SSX6-203ENST00000509958 336 ntTSL 3 BASIC5.13□□□□□ -1.59
CDH11P55287 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.13□□□□□ -1.59
CDH11P55287 AP000648.1-201ENST00000529682 397 ntBASIC5.13□□□□□ -1.59
CDH11P55287 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
CDH11P55287 GNG2-208ENST00000554875 430 ntTSL 5 BASIC5.13□□□□□ -1.59
CDH11P55287 AL136520.1-202ENST00000555494 763 ntBASIC5.13□□□□□ -1.59
CDH11P55287 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC5.13□□□□□ -1.59
CDH11P55287 AC006530.1-201ENST00000555980 571 ntBASIC5.13□□□□□ -1.59
CDH11P55287 DHFRP1-201ENST00000579682 559 ntBASIC5.13□□□□□ -1.59
CDH11P55287 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CDH11P55287 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CDH11P55287 AL031601.1-201ENST00000605702 394 ntBASIC5.13□□□□□ -1.59
CDH11P55287 AP005431.1-201ENST00000618479 319 ntBASIC5.13□□□□□ -1.59
CDH11P55287 AL391262.2-201ENST00000622466 494 ntBASIC5.13□□□□□ -1.59
CDH11P55287 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CDH11P55287 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.13□□□□□ -1.59
CDH11P55287 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms