Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CDH6P55285 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC5.53□□□□□ -1.52
CDH6P55285 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
CDH6P55285 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.53□□□□□ -1.52
CDH6P55285 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CDH6P55285 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CDH6P55285 RNA5SP335-201ENST00000363817 110 ntBASIC5.53□□□□□ -1.52
CDH6P55285 RNA5SP242-201ENST00000364171 118 ntBASIC5.53□□□□□ -1.52
CDH6P55285 SSX3-202ENST00000376893 800 ntTSL 2 BASIC5.53□□□□□ -1.52
CDH6P55285 SNORA11.3-201ENST00000408471 128 ntBASIC5.53□□□□□ -1.52
CDH6P55285 RNA5SP487-201ENST00000410186 122 ntBASIC5.53□□□□□ -1.52
CDH6P55285 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC5.53□□□□□ -1.52
CDH6P55285 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.53□□□□□ -1.52
CDH6P55285 AL513325.1-201ENST00000417716 1034 ntBASIC5.53□□□□□ -1.52
CDH6P55285 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC5.53□□□□□ -1.52
CDH6P55285 DSTNP5-201ENST00000427921 523 ntBASIC5.53□□□□□ -1.52
CDH6P55285 AL136231.1-201ENST00000429407 730 ntBASIC5.53□□□□□ -1.52
CDH6P55285 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC5.53□□□□□ -1.52
CDH6P55285 RPL15P21-201ENST00000495592 567 ntBASIC5.53□□□□□ -1.52
CDH6P55285 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC5.53□□□□□ -1.52
CDH6P55285 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC5.53□□□□□ -1.52
CDH6P55285 AC022360.1-201ENST00000521058 340 ntBASIC5.53□□□□□ -1.52
CDH6P55285 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC5.53□□□□□ -1.52
CDH6P55285 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC5.53□□□□□ -1.52
CDH6P55285 YWHABP2-201ENST00000540201 713 ntBASIC5.53□□□□□ -1.52
CDH6P55285 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC5.53□□□□□ -1.52
CDH6P55285 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CDH6P55285 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC5.53□□□□□ -1.52
CDH6P55285 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC5.53□□□□□ -1.52
CDH6P55285 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
CDH6P55285 SNORA11.6-201ENST00000619030 128 ntBASIC5.53□□□□□ -1.52
CDH6P55285 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
CDH6P55285 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CDH6P55285 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
CDH6P55285 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CDH6P55285 AC007342.5-201ENST00000571340 2142 ntBASIC5.53□□□□□ -1.52
CDH6P55285 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CDH6P55285 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CDH6P55285 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.53□□□□□ -1.52
CDH6P55285 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CDH6P55285 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
CDH6P55285 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.52□□□□□ -1.53
CDH6P55285 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CDH6P55285 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CDH6P55285 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.52□□□□□ -1.53
CDH6P55285 AL450345.1-202ENST00000605741 3881 ntBASIC5.52□□□□□ -1.53
CDH6P55285 RN7SKP153-201ENST00000365026 316 ntBASIC5.52□□□□□ -1.53
CDH6P55285 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC5.52□□□□□ -1.53
CDH6P55285 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
CDH6P55285 RNU1-77P-201ENST00000390868 162 ntBASIC5.52□□□□□ -1.53
CDH6P55285 AL121776.1-201ENST00000429337 372 ntBASIC5.52□□□□□ -1.53
CDH6P55285 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC5.52□□□□□ -1.53
CDH6P55285 AC104634.1-201ENST00000452720 462 ntBASIC5.52□□□□□ -1.53
CDH6P55285 AC016724.1-201ENST00000453215 421 ntBASIC5.52□□□□□ -1.53
CDH6P55285 CBX1P5-201ENST00000475330 559 ntBASIC5.52□□□□□ -1.53
CDH6P55285 RN7SL174P-201ENST00000475578 289 ntBASIC5.52□□□□□ -1.53
CDH6P55285 RPL7P41-201ENST00000485823 957 ntBASIC5.52□□□□□ -1.53
CDH6P55285 RN7SL547P-201ENST00000490793 290 ntBASIC5.52□□□□□ -1.53
CDH6P55285 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC5.52□□□□□ -1.53
CDH6P55285 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC5.52□□□□□ -1.53
CDH6P55285 HMGB1P40-201ENST00000525121 540 ntBASIC5.52□□□□□ -1.53
CDH6P55285 NMNAT1P5-201ENST00000559657 841 ntBASIC5.52□□□□□ -1.53
CDH6P55285 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CDH6P55285 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CDH6P55285 AC012146.2-201ENST00000576545 416 ntBASIC5.52□□□□□ -1.53
CDH6P55285 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC5.52□□□□□ -1.53
CDH6P55285 SUGT1P3-202ENST00000604259 383 ntBASIC5.52□□□□□ -1.53
CDH6P55285 AC005252.1-201ENST00000604518 1063 ntBASIC5.52□□□□□ -1.53
CDH6P55285 WBP1LP8-201ENST00000617401 327 ntBASIC5.52□□□□□ -1.53
CDH6P55285 AJ009632.2-205ENST00000635225 1169 ntTSL 5 BASIC5.52□□□□□ -1.53
CDH6P55285 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
CDH6P55285 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CDH6P55285 EEF1A1P14-201ENST00000421195 1376 ntBASIC5.52□□□□□ -1.53
CDH6P55285 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
CDH6P55285 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
CDH6P55285 AP005432.1-201ENST00000580891 3485 ntBASIC5.51□□□□□ -1.53
CDH6P55285 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CDH6P55285 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.51□□□□□ -1.53
CDH6P55285 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CDH6P55285 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.51□□□□□ -1.53
CDH6P55285 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CDH6P55285 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CDH6P55285 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CDH6P55285 RNA5SP132-201ENST00000364725 118 ntBASIC5.51□□□□□ -1.53
CDH6P55285 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CDH6P55285 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CDH6P55285 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC5.51□□□□□ -1.53
CDH6P55285 CHEK2P5-201ENST00000423877 246 ntBASIC5.51□□□□□ -1.53
CDH6P55285 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC5.51□□□□□ -1.53
CDH6P55285 VTI1BP4-201ENST00000427516 527 ntBASIC5.51□□□□□ -1.53
CDH6P55285 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC5.51□□□□□ -1.53
CDH6P55285 OR52E3P-201ENST00000452083 936 ntBASIC5.51□□□□□ -1.53
CDH6P55285 SEPT7P3-201ENST00000455017 621 ntBASIC5.51□□□□□ -1.53
CDH6P55285 RPL7P45-201ENST00000455851 743 ntBASIC5.51□□□□□ -1.53
CDH6P55285 RN7SL447P-201ENST00000494711 245 ntBASIC5.51□□□□□ -1.53
CDH6P55285 AC098976.1-201ENST00000513014 541 ntBASIC5.51□□□□□ -1.53
CDH6P55285 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC5.51□□□□□ -1.53
CDH6P55285 CASC19-203ENST00000523510 575 ntTSL 3 BASIC5.51□□□□□ -1.53
CDH6P55285 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.51□□□□□ -1.53
CDH6P55285 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 87.8 ms