Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 AC022387.2-201ENST00000604050 448 ntBASIC5.7□□□□□ -1.5
LIMK1P53667 AL133406.3-201ENST00000606817 541 ntBASIC5.7□□□□□ -1.5
LIMK1P53667 AC100827.5-201ENST00000615883 426 ntBASIC5.7□□□□□ -1.5
LIMK1P53667 RNA5SP439-201ENST00000617595 124 ntBASIC5.7□□□□□ -1.5
LIMK1P53667 OR52B5P-202ENST00000641118 1110 ntBASIC5.7□□□□□ -1.5
LIMK1P53667 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
LIMK1P53667 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
LIMK1P53667 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
LIMK1P53667 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
LIMK1P53667 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC5.7□□□□□ -1.5
LIMK1P53667 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC5.7□□□□□ -1.5
LIMK1P53667 SRRM1P3-201ENST00000426911 2678 ntBASIC5.7□□□□□ -1.5
LIMK1P53667 AC022164.1-201ENST00000568767 2673 ntBASIC5.7□□□□□ -1.5
LIMK1P53667 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
LIMK1P53667 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.69□□□□□ -1.5
LIMK1P53667 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
LIMK1P53667 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC5.69□□□□□ -1.5
LIMK1P53667 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
LIMK1P53667 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.69□□□□□ -1.5
LIMK1P53667 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC5.69□□□□□ -1.5
LIMK1P53667 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC5.69□□□□□ -1.5
LIMK1P53667 CASC19-260ENST00000641828 2001 ntBASIC5.69□□□□□ -1.5
LIMK1P53667 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC5.69□□□□□ -1.5
LIMK1P53667 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC5.69□□□□□ -1.5
LIMK1P53667 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.69□□□□□ -1.5
LIMK1P53667 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.69□□□□□ -1.5
LIMK1P53667 RNA5SP131-201ENST00000365452 119 ntBASIC5.69□□□□□ -1.5
LIMK1P53667 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC5.69□□□□□ -1.5
LIMK1P53667 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
LIMK1P53667 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
LIMK1P53667 DHFRP5-201ENST00000406944 564 ntBASIC5.69□□□□□ -1.5
LIMK1P53667 GLS-203ENST00000409215 632 ntTSL 4 BASIC5.69□□□□□ -1.5
LIMK1P53667 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC5.69□□□□□ -1.5
LIMK1P53667 RPS4XP5-201ENST00000419038 768 ntBASIC5.69□□□□□ -1.5
LIMK1P53667 RCC2P2-201ENST00000422174 918 ntBASIC5.69□□□□□ -1.5
LIMK1P53667 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC5.69□□□□□ -1.5
LIMK1P53667 EIF2S2P3-201ENST00000428356 999 ntBASIC5.69□□□□□ -1.5
LIMK1P53667 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC5.69□□□□□ -1.5
LIMK1P53667 GSTA7P-201ENST00000438425 448 ntBASIC5.69□□□□□ -1.5
LIMK1P53667 KRT8P51-201ENST00000438938 274 ntBASIC5.69□□□□□ -1.5
LIMK1P53667 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC5.69□□□□□ -1.5
LIMK1P53667 AL672167.3-201ENST00000465951 960 ntBASIC5.69□□□□□ -1.5
LIMK1P53667 RN7SL51P-201ENST00000468230 285 ntBASIC5.69□□□□□ -1.5
LIMK1P53667 AC007686.1-201ENST00000488511 463 ntBASIC5.69□□□□□ -1.5
LIMK1P53667 AC093267.1-201ENST00000489176 961 ntBASIC5.69□□□□□ -1.5
LIMK1P53667 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
LIMK1P53667 ATG10-AS1-201ENST00000504846 648 ntBASIC5.69□□□□□ -1.5
LIMK1P53667 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC5.69□□□□□ -1.5
LIMK1P53667 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC5.69□□□□□ -1.5
LIMK1P53667 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC5.69□□□□□ -1.5
LIMK1P53667 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC5.69□□□□□ -1.5
LIMK1P53667 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
LIMK1P53667 MIR4436B2-201ENST00000581415 91 ntBASIC5.69□□□□□ -1.5
LIMK1P53667 MIR4436B1-201ENST00000583272 91 ntBASIC5.69□□□□□ -1.5
LIMK1P53667 LAPTM4BP2-201ENST00000604542 446 ntBASIC5.69□□□□□ -1.5
LIMK1P53667 AL390318.1-201ENST00000624564 687 ntBASIC5.69□□□□□ -1.5
LIMK1P53667 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
LIMK1P53667 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
LIMK1P53667 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC5.69□□□□□ -1.5
LIMK1P53667 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
LIMK1P53667 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
LIMK1P53667 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
LIMK1P53667 DMD-205ENST00000359836 7339 ntTSL 5 BASIC5.69□□□□□ -1.5
LIMK1P53667 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
LIMK1P53667 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.69□□□□□ -1.5
LIMK1P53667 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC5.69□□□□□ -1.5
LIMK1P53667 STX3-208ENST00000641815 3236 ntBASIC5.69□□□□□ -1.5
LIMK1P53667 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
LIMK1P53667 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
LIMK1P53667 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC5.68□□□□□ -1.5
LIMK1P53667 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC5.68□□□□□ -1.5
LIMK1P53667 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
LIMK1P53667 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC5.68□□□□□ -1.5
LIMK1P53667 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
LIMK1P53667 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
LIMK1P53667 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
LIMK1P53667 MIR141-201ENST00000384975 95 ntBASIC5.68□□□□□ -1.5
LIMK1P53667 AL109941.1-201ENST00000401925 229 ntBASIC5.68□□□□□ -1.5
LIMK1P53667 SNORA11-201ENST00000408789 128 ntBASIC5.68□□□□□ -1.5
LIMK1P53667 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC5.68□□□□□ -1.5
LIMK1P53667 AL133173.1-201ENST00000423458 397 ntBASIC5.68□□□□□ -1.5
LIMK1P53667 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC5.68□□□□□ -1.5
LIMK1P53667 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC5.68□□□□□ -1.5
LIMK1P53667 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC5.68□□□□□ -1.5
LIMK1P53667 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
LIMK1P53667 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC5.68□□□□□ -1.5
LIMK1P53667 RPL7L1P3-201ENST00000455249 689 ntBASIC5.68□□□□□ -1.5
LIMK1P53667 AL356390.1-201ENST00000455684 397 ntBASIC5.68□□□□□ -1.5
LIMK1P53667 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC5.68□□□□□ -1.5
LIMK1P53667 AC087672.1-201ENST00000479876 766 ntBASIC5.68□□□□□ -1.5
LIMK1P53667 AC093827.1-201ENST00000480094 861 ntBASIC5.68□□□□□ -1.5
LIMK1P53667 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC5.68□□□□□ -1.5
LIMK1P53667 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC5.68□□□□□ -1.5
LIMK1P53667 AC090638.1-201ENST00000498296 909 ntBASIC5.68□□□□□ -1.5
LIMK1P53667 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC5.68□□□□□ -1.5
LIMK1P53667 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC5.68□□□□□ -1.5
LIMK1P53667 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC5.68□□□□□ -1.5
LIMK1P53667 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC5.68□□□□□ -1.5
LIMK1P53667 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC5.68□□□□□ -1.5
LIMK1P53667 AP001922.4-201ENST00000526967 290 ntBASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 166.7 ms