Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 HMGN1P5-201ENST00000448591 263 ntBASIC6.16□□□□□ -1.42
NEK3P51956 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC6.16□□□□□ -1.42
NEK3P51956 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC6.16□□□□□ -1.42
NEK3P51956 AC090568.1-201ENST00000509499 856 ntBASIC6.16□□□□□ -1.42
NEK3P51956 RNA5SP340-201ENST00000517132 107 ntBASIC6.16□□□□□ -1.42
NEK3P51956 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC6.16□□□□□ -1.42
NEK3P51956 AP004609.2-201ENST00000532177 190 ntBASIC6.16□□□□□ -1.42
NEK3P51956 AC027026.1-201ENST00000532323 742 ntBASIC6.16□□□□□ -1.42
NEK3P51956 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC6.16□□□□□ -1.42
NEK3P51956 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC6.16□□□□□ -1.42
NEK3P51956 AL049830.4-201ENST00000555149 351 ntBASIC6.16□□□□□ -1.42
NEK3P51956 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC6.16□□□□□ -1.42
NEK3P51956 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC6.16□□□□□ -1.42
NEK3P51956 STARD6-202ENST00000577499 696 ntTSL 2 BASIC6.16□□□□□ -1.42
NEK3P51956 RNU4ATAC-201ENST00000580972 127 ntBASIC6.16□□□□□ -1.42
NEK3P51956 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC6.16□□□□□ -1.42
NEK3P51956 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC6.16□□□□□ -1.42
NEK3P51956 AC068620.3-201ENST00000602749 560 ntBASIC6.16□□□□□ -1.42
NEK3P51956 OR2BH1P-201ENST00000608850 864 ntBASIC6.16□□□□□ -1.42
NEK3P51956 RMST_10.1-201ENST00000616309 154 ntBASIC6.16□□□□□ -1.42
NEK3P51956 AC078880.5-201ENST00000617845 421 ntBASIC6.16□□□□□ -1.42
NEK3P51956 AL137067.2-201ENST00000621202 131 ntBASIC6.16□□□□□ -1.42
NEK3P51956 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
NEK3P51956 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
NEK3P51956 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
NEK3P51956 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
NEK3P51956 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
NEK3P51956 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
NEK3P51956 CASC19-260ENST00000641828 2001 ntBASIC6.16□□□□□ -1.42
NEK3P51956 AL359091.1-201ENST00000449048 1734 ntBASIC6.16□□□□□ -1.42
NEK3P51956 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC6.16□□□□□ -1.42
NEK3P51956 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
NEK3P51956 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
NEK3P51956 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
NEK3P51956 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC6.15□□□□□ -1.42
NEK3P51956 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC6.15□□□□□ -1.42
NEK3P51956 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
NEK3P51956 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
NEK3P51956 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
NEK3P51956 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC6.15□□□□□ -1.42
NEK3P51956 AC109446.4-201ENST00000623235 2755 ntBASIC6.15□□□□□ -1.42
NEK3P51956 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
NEK3P51956 AC093311.1-201ENST00000506586 2021 ntBASIC6.15□□□□□ -1.42
NEK3P51956 NLN-202ENST00000502464 8354 ntTSL 5 BASIC6.15□□□□□ -1.42
NEK3P51956 RN7SKP28-201ENST00000364770 305 ntBASIC6.15□□□□□ -1.42
NEK3P51956 MIR142-201ENST00000384835 87 ntBASIC6.15□□□□□ -1.42
NEK3P51956 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
NEK3P51956 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC6.15□□□□□ -1.42
NEK3P51956 MTCO3P4-201ENST00000419236 787 ntBASIC6.15□□□□□ -1.42
NEK3P51956 AC066692.1-201ENST00000421721 457 ntBASIC6.15□□□□□ -1.42
NEK3P51956 RPL12P12-201ENST00000424633 501 ntBASIC6.15□□□□□ -1.42
NEK3P51956 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
NEK3P51956 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC6.15□□□□□ -1.42
NEK3P51956 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC6.15□□□□□ -1.42
NEK3P51956 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
NEK3P51956 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
NEK3P51956 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC6.15□□□□□ -1.42
NEK3P51956 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC6.15□□□□□ -1.42
NEK3P51956 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC6.15□□□□□ -1.42
NEK3P51956 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC6.15□□□□□ -1.42
NEK3P51956 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC6.15□□□□□ -1.42
NEK3P51956 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC6.15□□□□□ -1.42
NEK3P51956 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC6.15□□□□□ -1.42
NEK3P51956 MAL2-205ENST00000521048 575 ntTSL 4 BASIC6.15□□□□□ -1.42
NEK3P51956 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC6.15□□□□□ -1.42
NEK3P51956 CD69-203ENST00000536709 1020 ntTSL 2 BASIC6.15□□□□□ -1.42
NEK3P51956 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC6.15□□□□□ -1.42
NEK3P51956 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC6.15□□□□□ -1.42
NEK3P51956 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC6.15□□□□□ -1.42
NEK3P51956 AC090236.2-201ENST00000587933 1101 ntBASIC6.15□□□□□ -1.42
NEK3P51956 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC6.15□□□□□ -1.42
NEK3P51956 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC6.15□□□□□ -1.42
NEK3P51956 BNIP3P39-201ENST00000601077 554 ntBASIC6.15□□□□□ -1.42
NEK3P51956 AL645933.2-201ENST00000606743 1207 ntBASIC6.15□□□□□ -1.42
NEK3P51956 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC6.15□□□□□ -1.42
NEK3P51956 VN1R9P-201ENST00000614184 867 ntBASIC6.15□□□□□ -1.42
NEK3P51956 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC6.15□□□□□ -1.42
NEK3P51956 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC6.15□□□□□ -1.42
NEK3P51956 AC022919.1-201ENST00000624979 626 ntBASIC6.15□□□□□ -1.42
NEK3P51956 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC6.15□□□□□ -1.42
NEK3P51956 DNM1P47-203ENST00000571780 12667 ntBASIC6.15□□□□□ -1.43
NEK3P51956 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC6.15□□□□□ -1.43
NEK3P51956 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC6.15□□□□□ -1.43
NEK3P51956 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
NEK3P51956 HSPA8P17-201ENST00000427029 1382 ntBASIC6.15□□□□□ -1.43
NEK3P51956 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC6.15□□□□□ -1.43
NEK3P51956 MTCO1P18-201ENST00000455518 1419 ntBASIC6.15□□□□□ -1.43
NEK3P51956 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC6.15□□□□□ -1.43
NEK3P51956 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC6.15□□□□□ -1.43
NEK3P51956 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
NEK3P51956 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
NEK3P51956 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC6.15□□□□□ -1.43
NEK3P51956 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
NEK3P51956 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
NEK3P51956 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
NEK3P51956 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
NEK3P51956 AC024587.1-201ENST00000505925 2157 ntBASIC6.14□□□□□ -1.43
NEK3P51956 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
NEK3P51956 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
NEK3P51956 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 90.2 ms