Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 AL662874.1-201ENST00000426065 230 ntBASIC4.78□□□□□ -1.64
SRP9P49458 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC4.78□□□□□ -1.64
SRP9P49458 NANOGP9-201ENST00000439890 892 ntBASIC4.78□□□□□ -1.64
SRP9P49458 AL589765.3-201ENST00000446084 462 ntBASIC4.78□□□□□ -1.64
SRP9P49458 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
SRP9P49458 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
SRP9P49458 YWHAEP1-201ENST00000453697 763 ntBASIC4.78□□□□□ -1.64
SRP9P49458 AZGP1P2-201ENST00000454506 345 ntBASIC4.78□□□□□ -1.64
SRP9P49458 LDHBP2-201ENST00000456969 1005 ntBASIC4.78□□□□□ -1.64
SRP9P49458 RN7SL515P-201ENST00000463999 297 ntBASIC4.78□□□□□ -1.64
SRP9P49458 AC135999.1-201ENST00000478962 479 ntBASIC4.78□□□□□ -1.64
SRP9P49458 CREM-238ENST00000488741 651 ntTSL 2 BASIC4.78□□□□□ -1.64
SRP9P49458 IGBP1P4-201ENST00000503202 879 ntBASIC4.78□□□□□ -1.64
SRP9P49458 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC4.78□□□□□ -1.64
SRP9P49458 DUTP7-201ENST00000507982 486 ntBASIC4.78□□□□□ -1.64
SRP9P49458 AC021106.1-201ENST00000509020 1058 ntBASIC4.78□□□□□ -1.64
SRP9P49458 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC4.78□□□□□ -1.64
SRP9P49458 NRBF2P4-201ENST00000520874 850 ntBASIC4.78□□□□□ -1.64
SRP9P49458 OR5AM1P-201ENST00000532136 1032 ntBASIC4.78□□□□□ -1.64
SRP9P49458 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC4.78□□□□□ -1.64
SRP9P49458 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC4.78□□□□□ -1.64
SRP9P49458 MTCYBP13-201ENST00000578634 1093 ntBASIC4.78□□□□□ -1.64
SRP9P49458 MIR4505-201ENST00000582238 73 ntBASIC4.78□□□□□ -1.64
SRP9P49458 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC4.78□□□□□ -1.64
SRP9P49458 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC4.78□□□□□ -1.64
SRP9P49458 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC4.78□□□□□ -1.64
SRP9P49458 AL691477.1-201ENST00000624398 162 ntBASIC4.78□□□□□ -1.64
SRP9P49458 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
SRP9P49458 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC4.78□□□□□ -1.64
SRP9P49458 SNORA17.5-201ENST00000630429 132 ntBASIC4.78□□□□□ -1.64
SRP9P49458 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
SRP9P49458 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
SRP9P49458 AC100757.1-201ENST00000616872 1835 ntBASIC4.78□□□□□ -1.64
SRP9P49458 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
SRP9P49458 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SRP9P49458 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SRP9P49458 YES1P1-201ENST00000418510 1628 ntBASIC4.78□□□□□ -1.64
SRP9P49458 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SRP9P49458 AC114786.1-201ENST00000512892 1415 ntBASIC4.78□□□□□ -1.64
SRP9P49458 MT-RNR2-201ENST00000387347 1559 ntBASIC4.78□□□□□ -1.64
SRP9P49458 RNF19BPY-201ENST00000458209 1550 ntBASIC4.78□□□□□ -1.64
SRP9P49458 MRE11P1-201ENST00000464884 2127 ntBASIC4.78□□□□□ -1.64
SRP9P49458 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.78□□□□□ -1.64
SRP9P49458 TRIM51GP-201ENST00000534741 1350 ntBASIC4.78□□□□□ -1.64
SRP9P49458 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC4.77□□□□□ -1.65
SRP9P49458 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
SRP9P49458 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC4.77□□□□□ -1.65
SRP9P49458 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
SRP9P49458 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
SRP9P49458 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
SRP9P49458 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
SRP9P49458 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
SRP9P49458 SRRM1P3-201ENST00000426911 2678 ntBASIC4.77□□□□□ -1.65
SRP9P49458 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
SRP9P49458 DDX18P6-201ENST00000450119 1997 ntBASIC4.77□□□□□ -1.65
SRP9P49458 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
SRP9P49458 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
SRP9P49458 RNA5SP435-201ENST00000364044 108 ntBASIC4.77□□□□□ -1.65
SRP9P49458 RNU4-2-201ENST00000365668 141 ntBASIC4.77□□□□□ -1.65
SRP9P49458 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
SRP9P49458 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
SRP9P49458 RPL21P67-201ENST00000402896 478 ntBASIC4.77□□□□□ -1.65
SRP9P49458 AL009179.1-201ENST00000406085 265 ntBASIC4.77□□□□□ -1.65
SRP9P49458 NPM1P40-201ENST00000412758 733 ntBASIC4.77□□□□□ -1.65
SRP9P49458 RPL12P9-201ENST00000412942 488 ntBASIC4.77□□□□□ -1.65
SRP9P49458 BMS1P17-202ENST00000416720 316 ntBASIC4.77□□□□□ -1.65
SRP9P49458 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC4.77□□□□□ -1.65
SRP9P49458 TNPO1P1-201ENST00000423641 1138 ntBASIC4.77□□□□□ -1.65
SRP9P49458 AC104843.2-201ENST00000427666 297 ntBASIC4.77□□□□□ -1.65
SRP9P49458 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC4.77□□□□□ -1.65
SRP9P49458 RPL7P56-201ENST00000429441 717 ntBASIC4.77□□□□□ -1.65
SRP9P49458 AC006335.2-201ENST00000437993 330 ntBASIC4.77□□□□□ -1.65
SRP9P49458 EEF1B2P6-201ENST00000445713 673 ntBASIC4.77□□□□□ -1.65
SRP9P49458 IGBP1P3-201ENST00000447449 1000 ntBASIC4.77□□□□□ -1.65
SRP9P49458 AC090804.1-201ENST00000448870 490 ntBASIC4.77□□□□□ -1.65
SRP9P49458 AC002553.2-201ENST00000453217 340 ntBASIC4.77□□□□□ -1.65
SRP9P49458 RPL7P51-201ENST00000490532 749 ntBASIC4.77□□□□□ -1.65
SRP9P49458 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC4.77□□□□□ -1.65
SRP9P49458 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC4.77□□□□□ -1.65
SRP9P49458 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC4.77□□□□□ -1.65
SRP9P49458 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC4.77□□□□□ -1.65
SRP9P49458 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC4.77□□□□□ -1.65
SRP9P49458 AC027369.5-201ENST00000533838 755 ntBASIC4.77□□□□□ -1.65
SRP9P49458 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
SRP9P49458 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC4.77□□□□□ -1.65
SRP9P49458 AC040958.1-201ENST00000561102 201 ntBASIC4.77□□□□□ -1.65
SRP9P49458 MIR4472-2-201ENST00000582069 67 ntBASIC4.77□□□□□ -1.65
SRP9P49458 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC4.77□□□□□ -1.65
SRP9P49458 OR8G7P-201ENST00000616658 848 ntBASIC4.77□□□□□ -1.65
SRP9P49458 AC126175.1-201ENST00000617041 758 ntBASIC4.77□□□□□ -1.65
SRP9P49458 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
SRP9P49458 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.77□□□□□ -1.65
SRP9P49458 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC4.77□□□□□ -1.65
SRP9P49458 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC4.77□□□□□ -1.65
SRP9P49458 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
SRP9P49458 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
SRP9P49458 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC4.76□□□□□ -1.65
SRP9P49458 AL022322.2-201ENST00000624072 20397 ntBASIC4.76□□□□□ -1.65
SRP9P49458 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
SRP9P49458 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms