Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
SOX2P48431 CASC19-260ENST00000641828 2001 ntBASIC5.21□□□□□ -1.57
SOX2P48431 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
SOX2P48431 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
SOX2P48431 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
SOX2P48431 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.21□□□□□ -1.58
SOX2P48431 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
SOX2P48431 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
SOX2P48431 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
SOX2P48431 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
SOX2P48431 RNA5SP77-201ENST00000365394 120 ntBASIC5.21□□□□□ -1.58
SOX2P48431 FIG4-202ENST00000368941 791 ntTSL 3 BASIC5.21□□□□□ -1.58
SOX2P48431 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
SOX2P48431 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
SOX2P48431 AL672167.2-201ENST00000377164 879 ntBASIC5.21□□□□□ -1.58
SOX2P48431 U6.112-201ENST00000384129 70 ntBASIC5.21□□□□□ -1.58
SOX2P48431 RPL7P27-201ENST00000403775 720 ntBASIC5.21□□□□□ -1.58
SOX2P48431 METTL15P3-201ENST00000415522 1221 ntBASIC5.21□□□□□ -1.58
SOX2P48431 AL449283.1-202ENST00000418249 604 ntBASIC5.21□□□□□ -1.58
SOX2P48431 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC5.21□□□□□ -1.58
SOX2P48431 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC5.21□□□□□ -1.58
SOX2P48431 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC5.21□□□□□ -1.58
SOX2P48431 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC5.21□□□□□ -1.58
SOX2P48431 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC5.21□□□□□ -1.58
SOX2P48431 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC5.21□□□□□ -1.58
SOX2P48431 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5.21□□□□□ -1.58
SOX2P48431 RNASE9-203ENST00000429244 1084 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
SOX2P48431 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC5.21□□□□□ -1.58
SOX2P48431 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
SOX2P48431 CR769776.1-201ENST00000441254 787 ntBASIC5.21□□□□□ -1.58
SOX2P48431 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC5.21□□□□□ -1.58
SOX2P48431 RPL12P39-201ENST00000455456 496 ntBASIC5.21□□□□□ -1.58
SOX2P48431 AL603882.1-201ENST00000463059 681 ntBASIC5.21□□□□□ -1.58
SOX2P48431 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC5.21□□□□□ -1.58
SOX2P48431 RN7SL836P-201ENST00000476140 296 ntBASIC5.21□□□□□ -1.58
SOX2P48431 RPS27AP16-201ENST00000492222 470 ntBASIC5.21□□□□□ -1.58
SOX2P48431 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC5.21□□□□□ -1.58
SOX2P48431 AC093815.1-201ENST00000508637 280 ntBASIC5.21□□□□□ -1.58
SOX2P48431 BTG4P1-201ENST00000510421 183 ntBASIC5.21□□□□□ -1.58
SOX2P48431 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC5.21□□□□□ -1.58
SOX2P48431 AC090958.1-201ENST00000511122 351 ntBASIC5.21□□□□□ -1.58
SOX2P48431 AC093752.1-206ENST00000511823 336 ntBASIC5.21□□□□□ -1.58
SOX2P48431 RNU2-45P-201ENST00000516068 187 ntBASIC5.21□□□□□ -1.58
SOX2P48431 RNU6-1028P-201ENST00000517164 93 ntBASIC5.21□□□□□ -1.58
SOX2P48431 AC013701.1-201ENST00000522657 465 ntBASIC5.21□□□□□ -1.58
SOX2P48431 AC079064.1-201ENST00000528365 362 ntBASIC5.21□□□□□ -1.58
SOX2P48431 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC5.21□□□□□ -1.58
SOX2P48431 AC090424.1-201ENST00000535243 736 ntBASIC5.21□□□□□ -1.58
SOX2P48431 AC011611.5-201ENST00000552477 578 ntBASIC5.21□□□□□ -1.58
SOX2P48431 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC5.21□□□□□ -1.58
SOX2P48431 AL049870.4-201ENST00000555741 486 ntBASIC5.21□□□□□ -1.58
SOX2P48431 CSNK1A1P1-202ENST00000563423 981 ntBASIC5.21□□□□□ -1.58
SOX2P48431 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC5.21□□□□□ -1.58
SOX2P48431 AC025283.1-201ENST00000572039 734 ntBASIC5.21□□□□□ -1.58
SOX2P48431 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC5.21□□□□□ -1.58
SOX2P48431 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC5.21□□□□□ -1.58
SOX2P48431 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC5.21□□□□□ -1.58
SOX2P48431 AL078624.2-201ENST00000605063 554 ntBASIC5.21□□□□□ -1.58
SOX2P48431 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC5.21□□□□□ -1.58
SOX2P48431 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC5.21□□□□□ -1.58
SOX2P48431 PROS2P-201ENST00000474651 1951 ntBASIC5.21□□□□□ -1.58
SOX2P48431 LEKR1-201ENST00000356539 2572 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
SOX2P48431 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
SOX2P48431 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
SOX2P48431 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
SOX2P48431 AC114774.1-201ENST00000507410 1770 ntBASIC5.21□□□□□ -1.58
SOX2P48431 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
SOX2P48431 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
SOX2P48431 AC022325.1-201ENST00000502748 2199 ntBASIC5.21□□□□□ -1.58
SOX2P48431 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
SOX2P48431 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC5.2□□□□□ -1.58
SOX2P48431 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SOX2P48431 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC5.2□□□□□ -1.58
SOX2P48431 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SOX2P48431 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
SOX2P48431 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC5.2□□□□□ -1.58
SOX2P48431 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
SOX2P48431 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SOX2P48431 CRP-204ENST00000368112 787 ntTSL 2 BASIC5.2□□□□□ -1.58
SOX2P48431 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC5.2□□□□□ -1.58
SOX2P48431 ATP5HP3-201ENST00000396994 486 ntBASIC5.2□□□□□ -1.58
SOX2P48431 VIM2P-201ENST00000402383 1294 ntBASIC5.2□□□□□ -1.58
SOX2P48431 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC5.2□□□□□ -1.58
SOX2P48431 RN7SKP97-201ENST00000410966 333 ntBASIC5.2□□□□□ -1.58
SOX2P48431 RPL22P18-201ENST00000417197 377 ntBASIC5.2□□□□□ -1.58
SOX2P48431 NMD3P2-201ENST00000421815 761 ntBASIC5.2□□□□□ -1.58
SOX2P48431 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC5.2□□□□□ -1.58
SOX2P48431 DNAJA1P1-201ENST00000425106 1187 ntBASIC5.2□□□□□ -1.58
SOX2P48431 AL035458.1-201ENST00000433096 585 ntBASIC5.2□□□□□ -1.58
SOX2P48431 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SOX2P48431 AC015983.1-201ENST00000441577 373 ntBASIC5.2□□□□□ -1.58
SOX2P48431 AL645936.1-201ENST00000441979 518 ntBASIC5.2□□□□□ -1.58
SOX2P48431 ZNF619P1-201ENST00000446539 752 ntBASIC5.2□□□□□ -1.58
SOX2P48431 AC016027.4-201ENST00000450866 277 ntBASIC5.2□□□□□ -1.58
SOX2P48431 AC009518.1-201ENST00000452219 559 ntTSL 4 BASIC5.2□□□□□ -1.58
SOX2P48431 RPS20P4-201ENST00000461659 355 ntBASIC5.2□□□□□ -1.58
SOX2P48431 MRPS33-203ENST00000467334 622 ntTSL 2 BASIC5.2□□□□□ -1.58
SOX2P48431 PFN1P6-201ENST00000476786 399 ntBASIC5.2□□□□□ -1.58
SOX2P48431 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SOX2P48431 RN7SL267P-201ENST00000485107 261 ntBASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 170.3 ms