Protein–RNA interactions for Protein: P36406

TRIM23, E3 ubiquitin-protein ligase TRIM23, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23P36406 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC5.45□□□□□ -1.54
TRIM23P36406 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
TRIM23P36406 AC122688.1-201ENST00000541494 223 ntBASIC5.45□□□□□ -1.54
TRIM23P36406 SETP1-201ENST00000556014 845 ntBASIC5.45□□□□□ -1.54
TRIM23P36406 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC5.45□□□□□ -1.54
TRIM23P36406 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC5.45□□□□□ -1.54
TRIM23P36406 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC5.45□□□□□ -1.54
TRIM23P36406 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC5.45□□□□□ -1.54
TRIM23P36406 AL022394.1-201ENST00000606979 292 ntBASIC5.45□□□□□ -1.54
TRIM23P36406 AP005212.4-201ENST00000614206 710 ntBASIC5.45□□□□□ -1.54
TRIM23P36406 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC5.45□□□□□ -1.54
TRIM23P36406 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC5.45□□□□□ -1.54
TRIM23P36406 AC136428.4-201ENST00000634254 1155 ntBASIC5.45□□□□□ -1.54
TRIM23P36406 TMEM30CP-203ENST00000637814 1035 ntBASIC5.45□□□□□ -1.54
TRIM23P36406 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
TRIM23P36406 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
TRIM23P36406 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.45□□□□□ -1.54
TRIM23P36406 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.45□□□□□ -1.54
TRIM23P36406 NAMPTP1-201ENST00000440465 2514 ntBASIC5.45□□□□□ -1.54
TRIM23P36406 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
TRIM23P36406 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
TRIM23P36406 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
TRIM23P36406 OSBPL9P1-201ENST00000604744 1469 ntBASIC5.45□□□□□ -1.54
TRIM23P36406 CR382285.2-201ENST00000624662 1495 ntBASIC5.45□□□□□ -1.54
TRIM23P36406 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
TRIM23P36406 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
TRIM23P36406 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
TRIM23P36406 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.44□□□□□ -1.54
TRIM23P36406 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
TRIM23P36406 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
TRIM23P36406 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
TRIM23P36406 RNA5SP335-201ENST00000363817 110 ntBASIC5.44□□□□□ -1.54
TRIM23P36406 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
TRIM23P36406 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
TRIM23P36406 RNU6ATAC18P-201ENST00000408413 101 ntBASIC5.44□□□□□ -1.54
TRIM23P36406 AL390774.1-201ENST00000411924 246 ntBASIC5.44□□□□□ -1.54
TRIM23P36406 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC5.44□□□□□ -1.54
TRIM23P36406 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC5.44□□□□□ -1.54
TRIM23P36406 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC5.44□□□□□ -1.54
TRIM23P36406 MTND4LP12-201ENST00000448237 295 ntBASIC5.44□□□□□ -1.54
TRIM23P36406 AL606490.1-201ENST00000452266 765 ntBASIC5.44□□□□□ -1.54
TRIM23P36406 AZGP1P2-201ENST00000454506 345 ntBASIC5.44□□□□□ -1.54
TRIM23P36406 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC5.44□□□□□ -1.54
TRIM23P36406 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC5.44□□□□□ -1.54
TRIM23P36406 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC5.44□□□□□ -1.54
TRIM23P36406 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC5.44□□□□□ -1.54
TRIM23P36406 RNU4-18P-201ENST00000516751 149 ntBASIC5.44□□□□□ -1.54
TRIM23P36406 RNA5SP34-201ENST00000516887 130 ntBASIC5.44□□□□□ -1.54
TRIM23P36406 RN7SKP99-201ENST00000517028 307 ntBASIC5.44□□□□□ -1.54
TRIM23P36406 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC5.44□□□□□ -1.54
TRIM23P36406 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
TRIM23P36406 OR5AM1P-201ENST00000532136 1032 ntBASIC5.44□□□□□ -1.54
TRIM23P36406 AC126177.5-201ENST00000549599 178 ntBASIC5.44□□□□□ -1.54
TRIM23P36406 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC5.44□□□□□ -1.54
TRIM23P36406 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC5.44□□□□□ -1.54
TRIM23P36406 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC5.44□□□□□ -1.54
TRIM23P36406 AC009962.1-201ENST00000567327 3813 ntBASIC5.44□□□□□ -1.54
TRIM23P36406 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
TRIM23P36406 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC5.44□□□□□ -1.54
TRIM23P36406 OR7E18P-201ENST00000592589 702 ntBASIC5.44□□□□□ -1.54
TRIM23P36406 OR8G7P-201ENST00000616658 848 ntBASIC5.44□□□□□ -1.54
TRIM23P36406 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC5.44□□□□□ -1.54
TRIM23P36406 AC015660.5-201ENST00000623238 564 ntBASIC5.44□□□□□ -1.54
TRIM23P36406 AC004808.2-201ENST00000627965 773 ntBASIC5.44□□□□□ -1.54
TRIM23P36406 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
TRIM23P36406 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
TRIM23P36406 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
TRIM23P36406 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
TRIM23P36406 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
TRIM23P36406 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.44□□□□□ -1.54
TRIM23P36406 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.43□□□□□ -1.54
TRIM23P36406 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC5.43□□□□□ -1.54
TRIM23P36406 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
TRIM23P36406 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.43□□□□□ -1.54
TRIM23P36406 AC011503.2-201ENST00000594230 1500 ntBASIC5.43□□□□□ -1.54
TRIM23P36406 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC5.43□□□□□ -1.54
TRIM23P36406 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
TRIM23P36406 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
TRIM23P36406 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC5.43□□□□□ -1.54
TRIM23P36406 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC5.43□□□□□ -1.54
TRIM23P36406 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
TRIM23P36406 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
TRIM23P36406 SNORA5.1-201ENST00000384275 131 ntBASIC5.43□□□□□ -1.54
TRIM23P36406 RNA5SP187-201ENST00000384400 119 ntBASIC5.43□□□□□ -1.54
TRIM23P36406 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.43□□□□□ -1.54
TRIM23P36406 BMS1P13-201ENST00000417301 885 ntBASIC5.43□□□□□ -1.54
TRIM23P36406 SLC35E1P1-201ENST00000419313 864 ntBASIC5.43□□□□□ -1.54
TRIM23P36406 RPL7L1P9-201ENST00000431298 745 ntBASIC5.43□□□□□ -1.54
TRIM23P36406 AL591623.2-201ENST00000449978 222 ntBASIC5.43□□□□□ -1.54
TRIM23P36406 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC5.43□□□□□ -1.54
TRIM23P36406 RPS26P41-201ENST00000450370 284 ntBASIC5.43□□□□□ -1.54
TRIM23P36406 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC5.43□□□□□ -1.54
TRIM23P36406 RPS21P4-201ENST00000487122 248 ntBASIC5.43□□□□□ -1.54
TRIM23P36406 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC5.43□□□□□ -1.54
TRIM23P36406 AC008638.1-201ENST00000506035 866 ntBASIC5.43□□□□□ -1.54
TRIM23P36406 PGAM1P13-201ENST00000507497 754 ntBASIC5.43□□□□□ -1.54
TRIM23P36406 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC5.43□□□□□ -1.54
TRIM23P36406 HMGB1P44-201ENST00000508597 572 ntBASIC5.43□□□□□ -1.54
TRIM23P36406 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC5.43□□□□□ -1.54
TRIM23P36406 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC5.43□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms