Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 AC130364.2-201ENST00000528639 604 ntBASIC6.14□□□□□ -1.43
COL4A5P29400 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
COL4A5P29400 MIR4715-201ENST00000584117 79 ntBASIC6.14□□□□□ -1.43
COL4A5P29400 AC103792.1-201ENST00000603591 919 ntBASIC6.14□□□□□ -1.43
COL4A5P29400 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
COL4A5P29400 AC068724.3-201ENST00000625906 87 ntBASIC6.14□□□□□ -1.43
COL4A5P29400 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC6.14□□□□□ -1.43
COL4A5P29400 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC6.13□□□□□ -1.43
COL4A5P29400 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
COL4A5P29400 NAV3-202ENST00000536525 7386 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
COL4A5P29400 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC6.13□□□□□ -1.43
COL4A5P29400 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC6.13□□□□□ -1.43
COL4A5P29400 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
COL4A5P29400 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC6.13□□□□□ -1.43
COL4A5P29400 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
COL4A5P29400 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
COL4A5P29400 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
COL4A5P29400 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
COL4A5P29400 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC6.13□□□□□ -1.43
COL4A5P29400 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC6.13□□□□□ -1.43
COL4A5P29400 FRMD4B-210ENST00000478263 3761 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
COL4A5P29400 RNA5SP515-201ENST00000364570 118 ntBASIC6.13□□□□□ -1.43
COL4A5P29400 SNORA70F-201ENST00000384142 135 ntBASIC6.13□□□□□ -1.43
COL4A5P29400 RPS3AP23-201ENST00000401762 784 ntBASIC6.13□□□□□ -1.43
COL4A5P29400 AL049697.2-201ENST00000403708 294 ntBASIC6.13□□□□□ -1.43
COL4A5P29400 RNU4-25P-201ENST00000410569 230 ntBASIC6.13□□□□□ -1.43
COL4A5P29400 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC6.13□□□□□ -1.43
COL4A5P29400 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC6.13□□□□□ -1.43
COL4A5P29400 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC6.13□□□□□ -1.43
COL4A5P29400 AC083829.1-201ENST00000503756 657 ntBASIC6.13□□□□□ -1.43
COL4A5P29400 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC6.13□□□□□ -1.43
COL4A5P29400 AC009643.1-201ENST00000532030 391 ntBASIC6.13□□□□□ -1.43
COL4A5P29400 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC6.13□□□□□ -1.43
COL4A5P29400 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC6.13□□□□□ -1.43
COL4A5P29400 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC6.13□□□□□ -1.43
COL4A5P29400 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC6.13□□□□□ -1.43
COL4A5P29400 AC105129.1-201ENST00000560250 297 ntBASIC6.13□□□□□ -1.43
COL4A5P29400 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC6.13□□□□□ -1.43
COL4A5P29400 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
COL4A5P29400 PCDH15-231ENST00000617271 6425 ntAPPRIS P3 TSL 5 BASIC6.13□□□□□ -1.43
COL4A5P29400 PROX1-202ENST00000366958 8240 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
COL4A5P29400 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
COL4A5P29400 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
COL4A5P29400 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
COL4A5P29400 AC005225.5-201ENST00000623547 2225 ntBASIC6.12□□□□□ -1.43
COL4A5P29400 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
COL4A5P29400 AC107980.1-201ENST00000558671 3355 ntBASIC6.12□□□□□ -1.43
COL4A5P29400 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
COL4A5P29400 AC139713.2-214ENST00000642059 1811 ntBASIC6.12□□□□□ -1.43
COL4A5P29400 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC6.12□□□□□ -1.43
COL4A5P29400 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
COL4A5P29400 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
COL4A5P29400 U3.10-201ENST00000364459 214 ntBASIC6.12□□□□□ -1.43
COL4A5P29400 GNG5P2-201ENST00000372054 207 ntBASIC6.12□□□□□ -1.43
COL4A5P29400 MIR589-201ENST00000385238 99 ntBASIC6.12□□□□□ -1.43
COL4A5P29400 OR8V1P-201ENST00000395193 873 ntBASIC6.12□□□□□ -1.43
COL4A5P29400 RPL12P43-201ENST00000420608 499 ntBASIC6.12□□□□□ -1.43
COL4A5P29400 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC6.12□□□□□ -1.43
COL4A5P29400 RN7SL319P-201ENST00000480656 221 ntBASIC6.12□□□□□ -1.43
COL4A5P29400 AC013356.1-201ENST00000489027 564 ntBASIC6.12□□□□□ -1.43
COL4A5P29400 AC026402.1-201ENST00000513642 170 ntBASIC6.12□□□□□ -1.43
COL4A5P29400 PARP1P2-201ENST00000556806 195 ntBASIC6.12□□□□□ -1.43
COL4A5P29400 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
COL4A5P29400 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC6.12□□□□□ -1.43
COL4A5P29400 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC6.12□□□□□ -1.43
COL4A5P29400 AC245389.2-201ENST00000616023 576 ntBASIC6.12□□□□□ -1.43
COL4A5P29400 AC242843.1-201ENST00000618702 573 ntBASIC6.12□□□□□ -1.43
COL4A5P29400 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
COL4A5P29400 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
COL4A5P29400 LCP2-201ENST00000046794 4678 ntAPPRIS P2 TSL 1 (best) BASIC6.12□□□□□ -1.43
COL4A5P29400 ALPK2-201ENST00000361673 7303 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
COL4A5P29400 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC6.12□□□□□ -1.43
COL4A5P29400 KARSP3-201ENST00000571212 1504 ntBASIC6.12□□□□□ -1.43
COL4A5P29400 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
COL4A5P29400 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC6.12□□□□□ -1.43
COL4A5P29400 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
COL4A5P29400 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC6.11□□□□□ -1.43
COL4A5P29400 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC6.11□□□□□ -1.43
COL4A5P29400 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC6.11□□□□□ -1.43
COL4A5P29400 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
COL4A5P29400 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
COL4A5P29400 RN7SKP106-201ENST00000410832 272 ntBASIC6.11□□□□□ -1.43
COL4A5P29400 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC6.11□□□□□ -1.43
COL4A5P29400 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC6.11□□□□□ -1.43
COL4A5P29400 RPL23AP1-201ENST00000428990 471 ntBASIC6.11□□□□□ -1.43
COL4A5P29400 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC6.11□□□□□ -1.43
COL4A5P29400 AC005154.2-201ENST00000438110 379 ntBASIC6.11□□□□□ -1.43
COL4A5P29400 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC6.11□□□□□ -1.43
COL4A5P29400 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC6.11□□□□□ -1.43
COL4A5P29400 RPL23AP56-201ENST00000460778 453 ntBASIC6.11□□□□□ -1.43
COL4A5P29400 HMGN1P9-201ENST00000515212 298 ntBASIC6.11□□□□□ -1.43
COL4A5P29400 RN7SKP276-201ENST00000516242 268 ntBASIC6.11□□□□□ -1.43
COL4A5P29400 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC6.11□□□□□ -1.43
COL4A5P29400 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
COL4A5P29400 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC6.11□□□□□ -1.43
COL4A5P29400 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC6.11□□□□□ -1.43
COL4A5P29400 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC6.11□□□□□ -1.43
COL4A5P29400 MIR1254-2-201ENST00000579553 63 ntBASIC6.11□□□□□ -1.43
COL4A5P29400 BNIP3P35-201ENST00000604530 490 ntBASIC6.11□□□□□ -1.43
COL4A5P29400 AL109618.2-201ENST00000605527 211 ntBASIC6.11□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms