Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC8.77□□□□□ -1
CFTRP13569 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC8.77□□□□□ -1
CFTRP13569 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC8.77□□□□□ -1
CFTRP13569 MIR4277-201ENST00000578298 84 ntBASIC8.77□□□□□ -1
CFTRP13569 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC8.77□□□□□ -1
CFTRP13569 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC8.77□□□□□ -1
CFTRP13569 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC8.77□□□□□ -1
CFTRP13569 RAPGEF6-208ENST00000509018 8357 ntAPPRIS P3 TSL 1 (best) BASIC8.77□□□□□ -1.01
CFTRP13569 CAST-202ENST00000325674 3356 ntTSL 5 BASIC8.77□□□□□ -1.01
CFTRP13569 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
CFTRP13569 ZNF652-201ENST00000362063 5988 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
CFTRP13569 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC8.77□□□□□ -1.01
CFTRP13569 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
CFTRP13569 AL592293.2-201ENST00000422292 996 ntBASIC8.77□□□□□ -1.01
CFTRP13569 CYCSP11-201ENST00000436426 315 ntBASIC8.77□□□□□ -1.01
CFTRP13569 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC8.77□□□□□ -1.01
CFTRP13569 AC020779.1-201ENST00000478757 796 ntBASIC8.77□□□□□ -1.01
CFTRP13569 RPL7P41-201ENST00000485823 957 ntBASIC8.77□□□□□ -1.01
CFTRP13569 OR11I1P-201ENST00000486033 954 ntBASIC8.77□□□□□ -1.01
CFTRP13569 RPS24P16-201ENST00000497294 392 ntBASIC8.77□□□□□ -1.01
CFTRP13569 SOX5P1-201ENST00000524155 1127 ntBASIC8.77□□□□□ -1.01
CFTRP13569 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC8.77□□□□□ -1.01
CFTRP13569 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC8.76□□□□□ -1.01
CFTRP13569 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
CFTRP13569 GAPVD1-203ENST00000312123 4320 ntAPPRIS ALT1 TSL 1 (best) BASIC8.76□□□□□ -1.01
CFTRP13569 MAPRE2-203ENST00000436190 4323 ntTSL 2 BASIC8.76□□□□□ -1.01
CFTRP13569 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC8.76□□□□□ -1.01
CFTRP13569 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC8.76□□□□□ -1.01
CFTRP13569 ZHX3-201ENST00000309060 10030 ntAPPRIS P1 TSL 5 BASIC8.76□□□□□ -1.01
CFTRP13569 ZNF292-202ENST00000369577 10610 ntAPPRIS P2 TSL 1 (best) BASIC8.76□□□□□ -1.01
CFTRP13569 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
CFTRP13569 CD109-201ENST00000287097 9130 ntAPPRIS P3 TSL 1 (best) BASIC8.76□□□□□ -1.01
CFTRP13569 SELE-204ENST00000367776 3576 ntTSL 5 BASIC8.76□□□□□ -1.01
CFTRP13569 SELE-205ENST00000367777 3576 ntTSL 5 BASIC8.76□□□□□ -1.01
CFTRP13569 SCN8A-201ENST00000354534 11556 ntAPPRIS P3 TSL 1 (best) BASIC8.76□□□□□ -1.01
CFTRP13569 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC8.76□□□□□ -1.01
CFTRP13569 RNU4-39P-201ENST00000362455 127 ntBASIC8.76□□□□□ -1.01
CFTRP13569 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC8.76□□□□□ -1.01
CFTRP13569 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC8.76□□□□□ -1.01
CFTRP13569 AC012339.2-201ENST00000523996 453 ntBASIC8.76□□□□□ -1.01
CFTRP13569 AP003080.1-202ENST00000526526 915 ntBASIC8.76□□□□□ -1.01
CFTRP13569 AC105129.1-201ENST00000560250 297 ntBASIC8.76□□□□□ -1.01
CFTRP13569 AC020915.5-201ENST00000596836 964 ntBASIC8.76□□□□□ -1.01
CFTRP13569 AL109618.2-201ENST00000605527 211 ntBASIC8.76□□□□□ -1.01
CFTRP13569 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC8.76□□□□□ -1.01
CFTRP13569 FTO-223ENST00000640179 210 ntTSL 5 BASIC8.76□□□□□ -1.01
CFTRP13569 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
CFTRP13569 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC8.75□□□□□ -1.01
CFTRP13569 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC8.75□□□□□ -1.01
CFTRP13569 AC003973.3-201ENST00000624863 2822 ntBASIC8.75□□□□□ -1.01
CFTRP13569 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC8.75□□□□□ -1.01
CFTRP13569 PDE4DIP-206ENST00000369356 8307 ntAPPRIS P4 TSL 1 (best) BASIC8.75□□□□□ -1.01
CFTRP13569 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
CFTRP13569 TRRAP-201ENST00000355540 12590 ntAPPRIS P3 TSL 1 (best) BASIC8.75□□□□□ -1.01
CFTRP13569 MSR1-202ENST00000350896 3572 ntTSL 5 BASIC8.75□□□□□ -1.01
CFTRP13569 AC068769.1-201ENST00000474767 2426 ntBASIC8.75□□□□□ -1.01
CFTRP13569 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
CFTRP13569 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC8.75□□□□□ -1.01
CFTRP13569 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC8.75□□□□□ -1.01
CFTRP13569 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC8.75□□□□□ -1.01
CFTRP13569 AL021331.1-201ENST00000402817 582 ntBASIC8.75□□□□□ -1.01
CFTRP13569 NRBF2P3-201ENST00000432731 865 ntBASIC8.75□□□□□ -1.01
CFTRP13569 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC8.75□□□□□ -1.01
CFTRP13569 CEACAMP6-201ENST00000452007 574 ntBASIC8.75□□□□□ -1.01
CFTRP13569 AK3P4-201ENST00000504283 583 ntBASIC8.75□□□□□ -1.01
CFTRP13569 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC8.75□□□□□ -1.01
CFTRP13569 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC8.75□□□□□ -1.01
CFTRP13569 SSX9-202ENST00000608568 580 ntTSL 4 BASIC8.75□□□□□ -1.01
CFTRP13569 AC005962.2-201ENST00000611427 652 ntBASIC8.75□□□□□ -1.01
CFTRP13569 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC8.75□□□□□ -1.01
CFTRP13569 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC8.75□□□□□ -1.01
CFTRP13569 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC8.74□□□□□ -1.01
CFTRP13569 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC8.74□□□□□ -1.01
CFTRP13569 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC8.74□□□□□ -1.01
CFTRP13569 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
CFTRP13569 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC8.74□□□□□ -1.01
CFTRP13569 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC8.74□□□□□ -1.01
CFTRP13569 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC8.74□□□□□ -1.01
CFTRP13569 ATP5HP3-201ENST00000396994 486 ntBASIC8.74□□□□□ -1.01
CFTRP13569 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC8.74□□□□□ -1.01
CFTRP13569 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC8.74□□□□□ -1.01
CFTRP13569 AC093827.1-201ENST00000480094 861 ntBASIC8.74□□□□□ -1.01
CFTRP13569 RN7SKP276-201ENST00000516242 268 ntBASIC8.74□□□□□ -1.01
CFTRP13569 IGHVIII-47-1-201ENST00000518187 331 ntBASIC8.74□□□□□ -1.01
CFTRP13569 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC8.74□□□□□ -1.01
CFTRP13569 BNIP3P5-201ENST00000562290 498 ntBASIC8.74□□□□□ -1.01
CFTRP13569 EIF1P5-201ENST00000585002 234 ntBASIC8.74□□□□□ -1.01
CFTRP13569 AL356608.1-201ENST00000610034 820 ntBASIC8.74□□□□□ -1.01
CFTRP13569 SLC8A1-AS1-218ENST00000610721 956 ntTSL 5 BASIC8.74□□□□□ -1.01
CFTRP13569 AL392048.1-201ENST00000613946 534 ntBASIC8.74□□□□□ -1.01
CFTRP13569 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC8.74□□□□□ -1.01
CFTRP13569 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
CFTRP13569 AC004158.1-201ENST00000564508 4319 ntBASIC8.74□□□□□ -1.01
CFTRP13569 AC104162.1-201ENST00000430831 2382 ntBASIC8.73□□□□□ -1.01
CFTRP13569 ABLIM1-214ENST00000533213 7606 ntTSL 5 BASIC8.73□□□□□ -1.01
CFTRP13569 HHIP-201ENST00000296575 10072 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
CFTRP13569 U3.22-201ENST00000391120 215 ntBASIC8.73□□□□□ -1.01
CFTRP13569 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC8.73□□□□□ -1.01
CFTRP13569 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC8.73□□□□□ -1.01
CFTRP13569 AC083829.1-201ENST00000503756 657 ntBASIC8.73□□□□□ -1.01
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms