Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 MORF4L1P4-201ENST00000450245 976 ntBASIC5.95□□□□□ -1.46
RB1P06400 AL035090.1-201ENST00000454835 332 ntBASIC5.95□□□□□ -1.46
RB1P06400 TPRKBP1-201ENST00000456243 481 ntBASIC5.95□□□□□ -1.46
RB1P06400 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
RB1P06400 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC5.95□□□□□ -1.46
RB1P06400 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
RB1P06400 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC5.95□□□□□ -1.46
RB1P06400 RNA5SP228-201ENST00000516232 133 ntBASIC5.95□□□□□ -1.46
RB1P06400 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC5.95□□□□□ -1.46
RB1P06400 AC090424.1-201ENST00000535243 736 ntBASIC5.95□□□□□ -1.46
RB1P06400 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC5.95□□□□□ -1.46
RB1P06400 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.95□□□□□ -1.46
RB1P06400 AC092111.2-201ENST00000611627 1414 ntBASIC5.95□□□□□ -1.46
RB1P06400 U1.25-201ENST00000614085 162 ntBASIC5.95□□□□□ -1.46
RB1P06400 U1.34-201ENST00000618578 162 ntBASIC5.95□□□□□ -1.46
RB1P06400 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC5.95□□□□□ -1.46
RB1P06400 U1.31-201ENST00000620022 160 ntBASIC5.95□□□□□ -1.46
RB1P06400 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC5.95□□□□□ -1.46
RB1P06400 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.95□□□□□ -1.46
RB1P06400 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC5.95□□□□□ -1.46
RB1P06400 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC5.95□□□□□ -1.46
RB1P06400 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC5.95□□□□□ -1.46
RB1P06400 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
RB1P06400 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
RB1P06400 AC011493.1-201ENST00000596753 1632 ntBASIC5.95□□□□□ -1.46
RB1P06400 AC087565.3-202ENST00000642085 1603 ntBASIC5.95□□□□□ -1.46
RB1P06400 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
RB1P06400 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
RB1P06400 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
RB1P06400 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC5.95□□□□□ -1.46
RB1P06400 OR10AB1P-202ENST00000641219 1686 ntBASIC5.94□□□□□ -1.46
RB1P06400 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
RB1P06400 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
RB1P06400 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
RB1P06400 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
RB1P06400 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
RB1P06400 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC5.94□□□□□ -1.46
RB1P06400 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC5.94□□□□□ -1.46
RB1P06400 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.94□□□□□ -1.46
RB1P06400 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
RB1P06400 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
RB1P06400 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
RB1P06400 U3.36-201ENST00000408418 213 ntBASIC5.94□□□□□ -1.46
RB1P06400 TRIM60P17-201ENST00000415181 719 ntBASIC5.94□□□□□ -1.46
RB1P06400 AL512504.1-201ENST00000415494 778 ntBASIC5.94□□□□□ -1.46
RB1P06400 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC5.94□□□□□ -1.46
RB1P06400 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
RB1P06400 MEMO1P4-201ENST00000453590 386 ntBASIC5.94□□□□□ -1.46
RB1P06400 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC5.94□□□□□ -1.46
RB1P06400 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
RB1P06400 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC5.94□□□□□ -1.46
RB1P06400 MTND2P31-201ENST00000512602 616 ntBASIC5.94□□□□□ -1.46
RB1P06400 RNU6ATAC24P-201ENST00000516811 135 ntBASIC5.94□□□□□ -1.46
RB1P06400 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC5.94□□□□□ -1.46
RB1P06400 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC5.94□□□□□ -1.46
RB1P06400 SEC11B-201ENST00000518383 499 ntBASIC5.94□□□□□ -1.46
RB1P06400 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC5.94□□□□□ -1.46
RB1P06400 HMGB1P40-201ENST00000525121 540 ntBASIC5.94□□□□□ -1.46
RB1P06400 EIF4A2P3-201ENST00000525903 1055 ntBASIC5.94□□□□□ -1.46
RB1P06400 OR7E10P-201ENST00000526420 991 ntBASIC5.94□□□□□ -1.46
RB1P06400 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC5.94□□□□□ -1.46
RB1P06400 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC5.94□□□□□ -1.46
RB1P06400 AL121839.1-201ENST00000556233 1185 ntBASIC5.94□□□□□ -1.46
RB1P06400 AL163952.1-202ENST00000569625 600 ntBASIC5.94□□□□□ -1.46
RB1P06400 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC5.94□□□□□ -1.46
RB1P06400 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC5.94□□□□□ -1.46
RB1P06400 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC5.94□□□□□ -1.46
RB1P06400 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.94□□□□□ -1.46
RB1P06400 AC006115.2-201ENST00000596823 202 ntBASIC5.94□□□□□ -1.46
RB1P06400 AC100827.5-201ENST00000615883 426 ntBASIC5.94□□□□□ -1.46
RB1P06400 AC026367.3-201ENST00000619032 590 ntBASIC5.94□□□□□ -1.46
RB1P06400 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC5.94□□□□□ -1.46
RB1P06400 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
RB1P06400 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.94□□□□□ -1.46
RB1P06400 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
RB1P06400 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC5.94□□□□□ -1.46
RB1P06400 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC5.94□□□□□ -1.46
RB1P06400 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
RB1P06400 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
RB1P06400 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
RB1P06400 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
RB1P06400 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
RB1P06400 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.93□□□□□ -1.46
RB1P06400 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
RB1P06400 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
RB1P06400 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
RB1P06400 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
RB1P06400 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC5.93□□□□□ -1.46
RB1P06400 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
RB1P06400 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC5.93□□□□□ -1.46
RB1P06400 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
RB1P06400 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
RB1P06400 RNU1-43P-201ENST00000365052 165 ntBASIC5.93□□□□□ -1.46
RB1P06400 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
RB1P06400 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
RB1P06400 RPL23AP17-201ENST00000401064 499 ntBASIC5.93□□□□□ -1.46
RB1P06400 AC093162.1-201ENST00000419682 124 ntBASIC5.93□□□□□ -1.46
RB1P06400 AL034379.1-201ENST00000423216 253 ntBASIC5.93□□□□□ -1.46
RB1P06400 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC5.93□□□□□ -1.46
RB1P06400 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC5.93□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms