Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 AC091932.2-201ENST00000623014 291 ntBASIC5.3□□□□□ -1.56
HLA-DQB2P05538 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC5.3□□□□□ -1.56
HLA-DQB2P05538 AP002505.2-201ENST00000623585 696 ntBASIC5.3□□□□□ -1.56
HLA-DQB2P05538 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
HLA-DQB2P05538 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC5.3□□□□□ -1.56
HLA-DQB2P05538 AC018628.1-201ENST00000624147 3819 ntBASIC5.3□□□□□ -1.56
HLA-DQB2P05538 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
HLA-DQB2P05538 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
HLA-DQB2P05538 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
HLA-DQB2P05538 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
HLA-DQB2P05538 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
HLA-DQB2P05538 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.29□□□□□ -1.56
HLA-DQB2P05538 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
HLA-DQB2P05538 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
HLA-DQB2P05538 AL450345.1-202ENST00000605741 3881 ntBASIC5.29□□□□□ -1.56
HLA-DQB2P05538 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.29□□□□□ -1.56
HLA-DQB2P05538 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.29□□□□□ -1.56
HLA-DQB2P05538 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.29□□□□□ -1.56
HLA-DQB2P05538 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.29□□□□□ -1.56
HLA-DQB2P05538 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
HLA-DQB2P05538 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
HLA-DQB2P05538 SNORA51.1-201ENST00000363243 140 ntBASIC5.29□□□□□ -1.56
HLA-DQB2P05538 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
HLA-DQB2P05538 RNU6-171P-201ENST00000384354 107 ntBASIC5.29□□□□□ -1.56
HLA-DQB2P05538 OR8V1P-201ENST00000395193 873 ntBASIC5.29□□□□□ -1.56
HLA-DQB2P05538 SLC35E1P1-201ENST00000419313 864 ntBASIC5.29□□□□□ -1.56
HLA-DQB2P05538 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC5.29□□□□□ -1.56
HLA-DQB2P05538 MRPS21P2-201ENST00000424704 264 ntBASIC5.29□□□□□ -1.56
HLA-DQB2P05538 AL590399.4-201ENST00000436561 601 ntBASIC5.29□□□□□ -1.56
HLA-DQB2P05538 GAPDHP58-201ENST00000438477 1006 ntBASIC5.29□□□□□ -1.56
HLA-DQB2P05538 RPS29P10-201ENST00000439197 166 ntBASIC5.29□□□□□ -1.56
HLA-DQB2P05538 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC5.29□□□□□ -1.56
HLA-DQB2P05538 RPS21P4-201ENST00000487122 248 ntBASIC5.29□□□□□ -1.56
HLA-DQB2P05538 MAL2-208ENST00000523307 556 ntTSL 4 BASIC5.29□□□□□ -1.56
HLA-DQB2P05538 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC5.29□□□□□ -1.56
HLA-DQB2P05538 AC134349.2-201ENST00000535136 910 ntBASIC5.29□□□□□ -1.56
HLA-DQB2P05538 PSMA4-209ENST00000559082 1094 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
HLA-DQB2P05538 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
HLA-DQB2P05538 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC5.29□□□□□ -1.56
HLA-DQB2P05538 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC5.29□□□□□ -1.56
HLA-DQB2P05538 AL512329.2-201ENST00000607350 548 ntBASIC5.29□□□□□ -1.56
HLA-DQB2P05538 AP005131.7-201ENST00000610087 611 ntBASIC5.29□□□□□ -1.56
HLA-DQB2P05538 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC5.29□□□□□ -1.56
HLA-DQB2P05538 AC008115.4-201ENST00000619780 775 ntBASIC5.29□□□□□ -1.56
HLA-DQB2P05538 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
HLA-DQB2P05538 AC083837.1-201ENST00000565297 2994 ntBASIC5.29□□□□□ -1.56
HLA-DQB2P05538 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
HLA-DQB2P05538 SMG1P7-201ENST00000565246 2704 ntBASIC5.29□□□□□ -1.56
HLA-DQB2P05538 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
HLA-DQB2P05538 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
HLA-DQB2P05538 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
HLA-DQB2P05538 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC5.29□□□□□ -1.56
HLA-DQB2P05538 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
HLA-DQB2P05538 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
HLA-DQB2P05538 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.28□□□□□ -1.56
HLA-DQB2P05538 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
HLA-DQB2P05538 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC5.28□□□□□ -1.56
HLA-DQB2P05538 AC093671.1-201ENST00000624981 2929 ntBASIC5.28□□□□□ -1.56
HLA-DQB2P05538 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.28□□□□□ -1.56
HLA-DQB2P05538 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.28□□□□□ -1.56
HLA-DQB2P05538 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
HLA-DQB2P05538 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
HLA-DQB2P05538 RNU1-43P-201ENST00000365052 165 ntBASIC5.28□□□□□ -1.56
HLA-DQB2P05538 DUTP5-201ENST00000406790 469 ntBASIC5.28□□□□□ -1.56
HLA-DQB2P05538 MIR1286-201ENST00000408112 78 ntBASIC5.28□□□□□ -1.56
HLA-DQB2P05538 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
HLA-DQB2P05538 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC5.28□□□□□ -1.56
HLA-DQB2P05538 RPS4XP16-201ENST00000427198 791 ntBASIC5.28□□□□□ -1.56
HLA-DQB2P05538 NANOGP4-201ENST00000427230 913 ntBASIC5.28□□□□□ -1.56
HLA-DQB2P05538 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC5.28□□□□□ -1.56
HLA-DQB2P05538 AC046176.1-201ENST00000435260 1170 ntBASIC5.28□□□□□ -1.56
HLA-DQB2P05538 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC5.28□□□□□ -1.56
HLA-DQB2P05538 AL606490.1-201ENST00000452266 765 ntBASIC5.28□□□□□ -1.56
HLA-DQB2P05538 GTF2F2P1-201ENST00000511083 675 ntBASIC5.28□□□□□ -1.56
HLA-DQB2P05538 PFDN1-207ENST00000524074 395 ntTSL 5 BASIC5.28□□□□□ -1.56
HLA-DQB2P05538 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC5.28□□□□□ -1.56
HLA-DQB2P05538 AC024940.3-201ENST00000538551 316 ntBASIC5.28□□□□□ -1.56
HLA-DQB2P05538 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC5.28□□□□□ -1.56
HLA-DQB2P05538 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC5.28□□□□□ -1.56
HLA-DQB2P05538 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC5.28□□□□□ -1.56
HLA-DQB2P05538 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
HLA-DQB2P05538 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
HLA-DQB2P05538 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC5.28□□□□□ -1.56
HLA-DQB2P05538 PABPC1P6-201ENST00000445594 1829 ntBASIC5.27□□□□□ -1.57
HLA-DQB2P05538 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
HLA-DQB2P05538 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.27□□□□□ -1.57
HLA-DQB2P05538 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
HLA-DQB2P05538 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC5.27□□□□□ -1.57
HLA-DQB2P05538 BX284613.1-201ENST00000452221 1641 ntBASIC5.27□□□□□ -1.57
HLA-DQB2P05538 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.27□□□□□ -1.57
HLA-DQB2P05538 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
HLA-DQB2P05538 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
HLA-DQB2P05538 AC007618.1-201ENST00000366455 732 ntBASIC5.27□□□□□ -1.57
HLA-DQB2P05538 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
HLA-DQB2P05538 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.27□□□□□ -1.57
HLA-DQB2P05538 AC092642.1-201ENST00000392417 425 ntBASIC5.27□□□□□ -1.57
HLA-DQB2P05538 MIR1182-201ENST00000408363 97 ntBASIC5.27□□□□□ -1.57
HLA-DQB2P05538 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC5.27□□□□□ -1.57
HLA-DQB2P05538 HNRNPA3P4-201ENST00000427514 803 ntBASIC5.27□□□□□ -1.57
HLA-DQB2P05538 RPL5P25-201ENST00000441148 775 ntBASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms