Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC4.78□□□□□ -1.64
HLA-DPB1P04440 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC4.78□□□□□ -1.64
HLA-DPB1P04440 MIR3614-201ENST00000581261 86 ntBASIC4.78□□□□□ -1.64
HLA-DPB1P04440 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC4.78□□□□□ -1.64
HLA-DPB1P04440 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC4.78□□□□□ -1.64
HLA-DPB1P04440 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC4.78□□□□□ -1.64
HLA-DPB1P04440 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC4.78□□□□□ -1.64
HLA-DPB1P04440 AC008115.3-201ENST00000614874 549 ntBASIC4.78□□□□□ -1.64
HLA-DPB1P04440 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC4.78□□□□□ -1.64
HLA-DPB1P04440 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC4.78□□□□□ -1.64
HLA-DPB1P04440 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.78□□□□□ -1.64
HLA-DPB1P04440 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC4.78□□□□□ -1.64
HLA-DPB1P04440 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC4.78□□□□□ -1.64
HLA-DPB1P04440 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
HLA-DPB1P04440 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
HLA-DPB1P04440 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
HLA-DPB1P04440 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
HLA-DPB1P04440 AC007996.1-201ENST00000620414 2821 ntBASIC4.78□□□□□ -1.65
HLA-DPB1P04440 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
HLA-DPB1P04440 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
HLA-DPB1P04440 ZNF652P1-201ENST00000442420 1309 ntBASIC4.77□□□□□ -1.65
HLA-DPB1P04440 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
HLA-DPB1P04440 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
HLA-DPB1P04440 RNA5SP46-201ENST00000362370 120 ntBASIC4.77□□□□□ -1.65
HLA-DPB1P04440 RN7SKP15-201ENST00000364742 309 ntBASIC4.77□□□□□ -1.65
HLA-DPB1P04440 AL031985.1-201ENST00000392713 418 ntBASIC4.77□□□□□ -1.65
HLA-DPB1P04440 OR6E1P-201ENST00000414424 923 ntBASIC4.77□□□□□ -1.65
HLA-DPB1P04440 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC4.77□□□□□ -1.65
HLA-DPB1P04440 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
HLA-DPB1P04440 AC113412.1-201ENST00000425840 504 ntBASIC4.77□□□□□ -1.65
HLA-DPB1P04440 NANOGP4-201ENST00000427230 913 ntBASIC4.77□□□□□ -1.65
HLA-DPB1P04440 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC4.77□□□□□ -1.65
HLA-DPB1P04440 FMO7P-201ENST00000436045 768 ntBASIC4.77□□□□□ -1.65
HLA-DPB1P04440 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC4.77□□□□□ -1.65
HLA-DPB1P04440 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC4.77□□□□□ -1.65
HLA-DPB1P04440 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
HLA-DPB1P04440 NPM1P19-201ENST00000450070 712 ntBASIC4.77□□□□□ -1.65
HLA-DPB1P04440 RN7SL72P-201ENST00000460697 269 ntBASIC4.77□□□□□ -1.65
HLA-DPB1P04440 LINC02083-201ENST00000462835 515 ntTSL 3 BASIC4.77□□□□□ -1.65
HLA-DPB1P04440 NIFKP7-201ENST00000503365 834 ntBASIC4.77□□□□□ -1.65
HLA-DPB1P04440 AC109464.1-201ENST00000511091 819 ntBASIC4.77□□□□□ -1.65
HLA-DPB1P04440 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC4.77□□□□□ -1.65
HLA-DPB1P04440 MTATP6P1-201ENST00000514057 681 ntBASIC4.77□□□□□ -1.65
HLA-DPB1P04440 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC4.77□□□□□ -1.65
HLA-DPB1P04440 AL049872.1-201ENST00000556323 322 ntBASIC4.77□□□□□ -1.65
HLA-DPB1P04440 MRPS21P7-201ENST00000566937 238 ntBASIC4.77□□□□□ -1.65
HLA-DPB1P04440 GMFG-202ENST00000594700 397 ntTSL 2 BASIC4.77□□□□□ -1.65
HLA-DPB1P04440 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC4.77□□□□□ -1.65
HLA-DPB1P04440 RN7SL787P-201ENST00000613000 284 ntBASIC4.77□□□□□ -1.65
HLA-DPB1P04440 AC025574.2-201ENST00000615621 514 ntBASIC4.77□□□□□ -1.65
HLA-DPB1P04440 BX005214.3-202ENST00000619809 325 ntBASIC4.77□□□□□ -1.65
HLA-DPB1P04440 AC127024.6-201ENST00000621598 424 ntBASIC4.77□□□□□ -1.65
HLA-DPB1P04440 AP003400.3-201ENST00000624904 346 ntBASIC4.77□□□□□ -1.65
HLA-DPB1P04440 AC073869.10-201ENST00000642016 354 ntBASIC4.77□□□□□ -1.65
HLA-DPB1P04440 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC4.77□□□□□ -1.65
HLA-DPB1P04440 AFP-201ENST00000226359 1914 ntTSL 5 BASIC4.77□□□□□ -1.65
HLA-DPB1P04440 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC4.77□□□□□ -1.65
HLA-DPB1P04440 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
HLA-DPB1P04440 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
HLA-DPB1P04440 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC4.77□□□□□ -1.65
HLA-DPB1P04440 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
HLA-DPB1P04440 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
HLA-DPB1P04440 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
HLA-DPB1P04440 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
HLA-DPB1P04440 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
HLA-DPB1P04440 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
HLA-DPB1P04440 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
HLA-DPB1P04440 UQCRC2P1-201ENST00000417777 1332 ntBASIC4.76□□□□□ -1.65
HLA-DPB1P04440 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
HLA-DPB1P04440 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
HLA-DPB1P04440 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
HLA-DPB1P04440 AC006600.2-201ENST00000624834 2506 ntBASIC4.76□□□□□ -1.65
HLA-DPB1P04440 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
HLA-DPB1P04440 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
HLA-DPB1P04440 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
HLA-DPB1P04440 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
HLA-DPB1P04440 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
HLA-DPB1P04440 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
HLA-DPB1P04440 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
HLA-DPB1P04440 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
HLA-DPB1P04440 AL133173.1-201ENST00000423458 397 ntBASIC4.76□□□□□ -1.65
HLA-DPB1P04440 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC4.76□□□□□ -1.65
HLA-DPB1P04440 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC4.76□□□□□ -1.65
HLA-DPB1P04440 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC4.76□□□□□ -1.65
HLA-DPB1P04440 RPL12P17-201ENST00000432393 498 ntBASIC4.76□□□□□ -1.65
HLA-DPB1P04440 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC4.76□□□□□ -1.65
HLA-DPB1P04440 AC002504.1-201ENST00000438281 691 ntBASIC4.76□□□□□ -1.65
HLA-DPB1P04440 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC4.76□□□□□ -1.65
HLA-DPB1P04440 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC4.76□□□□□ -1.65
HLA-DPB1P04440 AL161636.2-201ENST00000445179 927 ntBASIC4.76□□□□□ -1.65
HLA-DPB1P04440 AL450996.1-201ENST00000445574 1202 ntBASIC4.76□□□□□ -1.65
HLA-DPB1P04440 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
HLA-DPB1P04440 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC4.76□□□□□ -1.65
HLA-DPB1P04440 AC138866.2-201ENST00000508650 584 ntBASIC4.76□□□□□ -1.65
HLA-DPB1P04440 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC4.76□□□□□ -1.65
HLA-DPB1P04440 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC4.76□□□□□ -1.65
HLA-DPB1P04440 MINCR-206ENST00000524335 499 ntTSL 2 BASIC4.76□□□□□ -1.65
HLA-DPB1P04440 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC4.76□□□□□ -1.65
HLA-DPB1P04440 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC4.76□□□□□ -1.65
HLA-DPB1P04440 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 91.7 ms