Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 AC025287.2-201ENST00000621911 668 ntBASIC6.9□□□□□ -1.3
PDGFAP04085 AP005264.7-201ENST00000625003 745 ntBASIC6.9□□□□□ -1.3
PDGFAP04085 AC005841.2-201ENST00000637658 1167 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.3
PDGFAP04085 CRYM-AS1-204ENST00000637983 556 ntBASIC6.9□□□□□ -1.3
PDGFAP04085 HEATR1-202ENST00000366581 6538 ntTSL 5 BASIC6.9□□□□□ -1.3
PDGFAP04085 CTNND1-218ENST00000528232 5745 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
PDGFAP04085 ZMYND8-216ENST00000471951 4053 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.31
PDGFAP04085 SLC30A8-208ENST00000521243 1393 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
PDGFAP04085 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC6.9□□□□□ -1.31
PDGFAP04085 IFIT1P1-201ENST00000400497 1449 ntBASIC6.9□□□□□ -1.31
PDGFAP04085 ZNF667-206ENST00000591790 5250 ntTSL 2 BASIC6.9□□□□□ -1.31
PDGFAP04085 Z93929.1-201ENST00000418200 1475 ntBASIC6.9□□□□□ -1.31
PDGFAP04085 PEAK1-202ENST00000558305 4644 ntTSL 4 BASIC6.9□□□□□ -1.31
PDGFAP04085 AC006305.1-201ENST00000382897 2558 ntTSL 2 BASIC6.9□□□□□ -1.31
PDGFAP04085 SOX6-211ENST00000528429 2656 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.31
PDGFAP04085 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
PDGFAP04085 AC003973.3-201ENST00000624863 2822 ntBASIC6.9□□□□□ -1.31
PDGFAP04085 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.31
PDGFAP04085 ACTR6-209ENST00000551617 1715 ntTSL 5 BASIC6.9□□□□□ -1.31
PDGFAP04085 WDR89-202ENST00000394942 2993 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.31
PDGFAP04085 HSDL2-201ENST00000398803 2983 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
PDGFAP04085 SGCD-202ENST00000435422 9755 ntAPPRIS ALT1 TSL 1 (best) BASIC6.89□□□□□ -1.31
PDGFAP04085 LINC01427-202ENST00000635258 4566 ntTSL 5 BASIC6.89□□□□□ -1.31
PDGFAP04085 TBC1D23-205ENST00000475134 2074 ntTSL 5 BASIC6.89□□□□□ -1.31
PDGFAP04085 ASB4-202ENST00000325885 3825 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
PDGFAP04085 ACOT13-201ENST00000230048 4047 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
PDGFAP04085 CLNK-204ENST00000515667 4180 ntAPPRIS ALT2 TSL 3 BASIC6.89□□□□□ -1.31
PDGFAP04085 GON4L-204ENST00000437809 7713 ntAPPRIS P3 TSL 5 BASIC6.89□□□□□ -1.31
PDGFAP04085 CA5B-201ENST00000318636 6835 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
PDGFAP04085 PSMC2-203ENST00000435765 3054 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
PDGFAP04085 MRPS31P5-201ENST00000416599 3494 ntTSL 2 BASIC6.89□□□□□ -1.31
PDGFAP04085 MAPK10-270ENST00000641102 3538 ntBASIC6.89□□□□□ -1.31
PDGFAP04085 DEFB124-201ENST00000317676 216 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
PDGFAP04085 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
PDGFAP04085 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC6.89□□□□□ -1.31
PDGFAP04085 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
PDGFAP04085 FUNDC2P3-201ENST00000334716 533 ntBASIC6.89□□□□□ -1.31
PDGFAP04085 RNU6-462P-201ENST00000362659 105 ntBASIC6.89□□□□□ -1.31
PDGFAP04085 Y_RNA.813-201ENST00000364639 102 ntBASIC6.89□□□□□ -1.31
PDGFAP04085 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
PDGFAP04085 SNORD116-23-201ENST00000384645 92 ntBASIC6.89□□□□□ -1.31
PDGFAP04085 MIR555-201ENST00000384987 96 ntBASIC6.89□□□□□ -1.31
PDGFAP04085 OR2H1-204ENST00000396792 1294 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
PDGFAP04085 NUS1P4-201ENST00000401550 585 ntBASIC6.89□□□□□ -1.31
PDGFAP04085 NACAP7-201ENST00000407371 609 ntBASIC6.89□□□□□ -1.31
PDGFAP04085 LARP1P1-201ENST00000407692 292 ntBASIC6.89□□□□□ -1.31
PDGFAP04085 AC004986.1-201ENST00000414855 607 ntBASIC6.89□□□□□ -1.31
PDGFAP04085 AC017078.1-201ENST00000416146 368 ntBASIC6.89□□□□□ -1.31
PDGFAP04085 AC005162.1-201ENST00000416513 389 ntTSL 5 BASIC6.89□□□□□ -1.31
PDGFAP04085 TMBIM7P-201ENST00000418074 855 ntBASIC6.89□□□□□ -1.31
PDGFAP04085 BOLA3P4-201ENST00000418151 400 ntBASIC6.89□□□□□ -1.31
PDGFAP04085 B3GALNT1P1-201ENST00000420569 975 ntBASIC6.89□□□□□ -1.31
PDGFAP04085 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC6.89□□□□□ -1.31
PDGFAP04085 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC6.89□□□□□ -1.31
PDGFAP04085 AC005033.1-201ENST00000428904 813 ntBASIC6.89□□□□□ -1.31
PDGFAP04085 VDAC1P6-201ENST00000430062 855 ntBASIC6.89□□□□□ -1.31
PDGFAP04085 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC6.89□□□□□ -1.31
PDGFAP04085 RAB11AP1-201ENST00000442978 646 ntBASIC6.89□□□□□ -1.31
PDGFAP04085 TPT1P14-201ENST00000448018 505 ntBASIC6.89□□□□□ -1.31
PDGFAP04085 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC6.89□□□□□ -1.31
PDGFAP04085 RPL18AP17-201ENST00000455326 198 ntBASIC6.89□□□□□ -1.31
PDGFAP04085 RN7SL741P-201ENST00000482473 289 ntBASIC6.89□□□□□ -1.31
PDGFAP04085 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC6.89□□□□□ -1.31
PDGFAP04085 SUMO2P17-201ENST00000504438 285 ntBASIC6.89□□□□□ -1.31
PDGFAP04085 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC6.89□□□□□ -1.31
PDGFAP04085 AC093668.1-201ENST00000514917 911 ntAPPRIS P1 TSL 3 BASIC6.89□□□□□ -1.31
PDGFAP04085 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC6.89□□□□□ -1.31
PDGFAP04085 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC6.89□□□□□ -1.31
PDGFAP04085 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC6.89□□□□□ -1.31
PDGFAP04085 COX6C-210ENST00000524245 513 ntAPPRIS P1 TSL 2 BASIC6.89□□□□□ -1.31
PDGFAP04085 SERPINA15P-201ENST00000529287 266 ntBASIC6.89□□□□□ -1.31
PDGFAP04085 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
PDGFAP04085 OR7E161P-201ENST00000533722 967 ntBASIC6.89□□□□□ -1.31
PDGFAP04085 AC127526.3-201ENST00000534291 450 ntTSL 3 BASIC6.89□□□□□ -1.31
PDGFAP04085 MIR4800-201ENST00000537353 80 ntBASIC6.89□□□□□ -1.31
PDGFAP04085 AC126177.6-201ENST00000550420 1009 ntBASIC6.89□□□□□ -1.31
PDGFAP04085 AL358332.1-201ENST00000555649 813 ntTSL 5 BASIC6.89□□□□□ -1.31
PDGFAP04085 AC121758.1-202ENST00000556917 658 ntBASIC6.89□□□□□ -1.31
PDGFAP04085 AC244034.2-201ENST00000562504 509 ntBASIC6.89□□□□□ -1.31
PDGFAP04085 TTC39C-AS1-201ENST00000579713 817 ntTSL 5 BASIC6.89□□□□□ -1.31
PDGFAP04085 RN7SL835P-201ENST00000579920 262 ntBASIC6.89□□□□□ -1.31
PDGFAP04085 IGLJCOR18-201ENST00000584002 424 ntBASIC6.89□□□□□ -1.31
PDGFAP04085 SLC14A1-214ENST00000589700 1022 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
PDGFAP04085 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC6.89□□□□□ -1.31
PDGFAP04085 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC6.89□□□□□ -1.31
PDGFAP04085 AC122710.3-201ENST00000606566 541 ntBASIC6.89□□□□□ -1.31
PDGFAP04085 AL359535.1-201ENST00000612100 1087 ntBASIC6.89□□□□□ -1.31
PDGFAP04085 AL592295.2-201ENST00000612578 206 ntBASIC6.89□□□□□ -1.31
PDGFAP04085 AC007742.2-201ENST00000618226 398 ntBASIC6.89□□□□□ -1.31
PDGFAP04085 AC004009.2-201ENST00000623016 728 ntBASIC6.89□□□□□ -1.31
PDGFAP04085 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC6.89□□□□□ -1.31
PDGFAP04085 AC120349.2-201ENST00000625002 298 ntBASIC6.89□□□□□ -1.31
PDGFAP04085 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC6.89□□□□□ -1.31
PDGFAP04085 GLUD1P2-202ENST00000630097 606 ntTSL 3 BASIC6.89□□□□□ -1.31
PDGFAP04085 LINC00559-201ENST00000569476 3867 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
PDGFAP04085 USP32P2-201ENST00000412260 4329 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
PDGFAP04085 AL136298.2-201ENST00000556497 1570 ntBASIC6.89□□□□□ -1.31
PDGFAP04085 RNASE13-201ENST00000382951 1607 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
PDGFAP04085 MED23-209ENST00000539158 1636 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
PDGFAP04085 KIT-201ENST00000288135 5186 ntAPPRIS P3 TSL 1 (best) BASIC6.89□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 124.8 ms