Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 TSC1-208ENST00000545250 8310 ntTSL 5 BASIC6.2□□□□□ -1.42
COL4A1P02462 Z98755.1-201ENST00000407015 1384 ntBASIC6.2□□□□□ -1.42
COL4A1P02462 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
COL4A1P02462 OR8V1P-201ENST00000395193 873 ntBASIC6.2□□□□□ -1.42
COL4A1P02462 SNORA11-201ENST00000408789 128 ntBASIC6.2□□□□□ -1.42
COL4A1P02462 NPM1P40-201ENST00000412758 733 ntBASIC6.2□□□□□ -1.42
COL4A1P02462 MTND4LP17-201ENST00000414607 293 ntBASIC6.2□□□□□ -1.42
COL4A1P02462 AC073648.4-201ENST00000442655 781 ntBASIC6.2□□□□□ -1.42
COL4A1P02462 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC6.2□□□□□ -1.42
COL4A1P02462 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC6.2□□□□□ -1.42
COL4A1P02462 CEACAMP10-202ENST00000495431 496 ntBASIC6.2□□□□□ -1.42
COL4A1P02462 BGLT3-201ENST00000564523 994 ntBASIC6.2□□□□□ -1.42
COL4A1P02462 AC091042.1-201ENST00000579213 173 ntBASIC6.2□□□□□ -1.42
COL4A1P02462 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC6.2□□□□□ -1.42
COL4A1P02462 RNF123-214ENST00000629802 207 ntTSL 5 BASIC6.2□□□□□ -1.42
COL4A1P02462 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC6.2□□□□□ -1.42
COL4A1P02462 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC6.2□□□□□ -1.42
COL4A1P02462 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
COL4A1P02462 NCKAP1-202ENST00000361354 20347 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
COL4A1P02462 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC6.2□□□□□ -1.42
COL4A1P02462 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC6.2□□□□□ -1.42
COL4A1P02462 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
COL4A1P02462 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
COL4A1P02462 KIF13A-205ENST00000378843 5707 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
COL4A1P02462 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC6.2□□□□□ -1.42
COL4A1P02462 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC6.2□□□□□ -1.42
COL4A1P02462 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC6.2□□□□□ -1.42
COL4A1P02462 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
COL4A1P02462 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC6.2□□□□□ -1.42
COL4A1P02462 SNORA70.6-201ENST00000383934 134 ntBASIC6.2□□□□□ -1.42
COL4A1P02462 AC017019.1-201ENST00000426129 261 ntBASIC6.2□□□□□ -1.42
COL4A1P02462 BX276092.6-201ENST00000430476 250 ntBASIC6.2□□□□□ -1.42
COL4A1P02462 BX276092.8-201ENST00000455722 250 ntBASIC6.2□□□□□ -1.42
COL4A1P02462 AC093720.1-201ENST00000505681 714 ntBASIC6.2□□□□□ -1.42
COL4A1P02462 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC6.2□□□□□ -1.42
COL4A1P02462 AC098976.1-201ENST00000513014 541 ntBASIC6.2□□□□□ -1.42
COL4A1P02462 OR8Q1P-201ENST00000526467 655 ntBASIC6.2□□□□□ -1.42
COL4A1P02462 AP001880.2-201ENST00000538233 448 ntBASIC6.2□□□□□ -1.42
COL4A1P02462 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC6.2□□□□□ -1.42
COL4A1P02462 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC6.2□□□□□ -1.42
COL4A1P02462 AC011487.3-201ENST00000593607 453 ntBASIC6.2□□□□□ -1.42
COL4A1P02462 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC6.2□□□□□ -1.42
COL4A1P02462 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC6.2□□□□□ -1.42
COL4A1P02462 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC6.2□□□□□ -1.42
COL4A1P02462 NF1-202ENST00000358273 12425 ntAPPRIS ALT1 TSL 1 (best) BASIC6.2□□□□□ -1.42
COL4A1P02462 TEX14-203ENST00000389934 4927 ntAPPRIS P4 TSL 1 (best) BASIC6.2□□□□□ -1.42
COL4A1P02462 MYO1B-203ENST00000392316 4764 ntTSL 5 BASIC6.2□□□□□ -1.42
COL4A1P02462 METTL21EP-202ENST00000605100 2312 ntTSL 2 BASIC6.19□□□□□ -1.42
COL4A1P02462 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
COL4A1P02462 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
COL4A1P02462 IL16-204ENST00000394660 9616 ntAPPRIS ALT2 TSL 2 BASIC6.19□□□□□ -1.42
COL4A1P02462 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
COL4A1P02462 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
COL4A1P02462 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
COL4A1P02462 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
COL4A1P02462 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC6.19□□□□□ -1.42
COL4A1P02462 AC008124.1-201ENST00000609803 9730 ntBASIC6.19□□□□□ -1.42
COL4A1P02462 AC092570.3-201ENST00000420113 693 ntBASIC6.19□□□□□ -1.42
COL4A1P02462 AL161722.2-201ENST00000434731 981 ntBASIC6.19□□□□□ -1.42
COL4A1P02462 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC6.19□□□□□ -1.42
COL4A1P02462 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC6.19□□□□□ -1.42
COL4A1P02462 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
COL4A1P02462 AL691482.1-201ENST00000453255 87 ntBASIC6.19□□□□□ -1.42
COL4A1P02462 NDUFA12P1-201ENST00000455914 406 ntBASIC6.19□□□□□ -1.42
COL4A1P02462 RN7SL189P-201ENST00000468631 289 ntBASIC6.19□□□□□ -1.42
COL4A1P02462 AC092709.1-201ENST00000521355 1045 ntBASIC6.19□□□□□ -1.42
COL4A1P02462 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC6.19□□□□□ -1.42
COL4A1P02462 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC6.19□□□□□ -1.42
COL4A1P02462 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC6.19□□□□□ -1.42
COL4A1P02462 SSX9-202ENST00000608568 580 ntTSL 4 BASIC6.19□□□□□ -1.42
COL4A1P02462 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC6.19□□□□□ -1.42
COL4A1P02462 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC6.19□□□□□ -1.42
COL4A1P02462 SORCS1-210ENST00000622431 6701 ntTSL 5 BASIC6.19□□□□□ -1.42
COL4A1P02462 KAT6B-204ENST00000372724 7106 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
COL4A1P02462 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
COL4A1P02462 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
COL4A1P02462 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
COL4A1P02462 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
COL4A1P02462 APELA-202ENST00000507152 2602 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
COL4A1P02462 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
COL4A1P02462 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
COL4A1P02462 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
COL4A1P02462 ZFP37-201ENST00000374227 6266 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
COL4A1P02462 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
COL4A1P02462 NDUFA9-201ENST00000266544 8363 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
COL4A1P02462 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC6.18□□□□□ -1.42
COL4A1P02462 AL590240.1-201ENST00000334118 313 ntBASIC6.18□□□□□ -1.42
COL4A1P02462 OR51B3P-201ENST00000412287 913 ntBASIC6.18□□□□□ -1.42
COL4A1P02462 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC6.18□□□□□ -1.42
COL4A1P02462 HSPD1P12-201ENST00000429127 1069 ntBASIC6.18□□□□□ -1.42
COL4A1P02462 RPL19P16-201ENST00000433839 588 ntBASIC6.18□□□□□ -1.42
COL4A1P02462 CYCSP11-201ENST00000436426 315 ntBASIC6.18□□□□□ -1.42
COL4A1P02462 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC6.18□□□□□ -1.42
COL4A1P02462 AURKAPS2-201ENST00000454983 333 ntBASIC6.18□□□□□ -1.42
COL4A1P02462 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC6.18□□□□□ -1.42
COL4A1P02462 RAB9BP1-201ENST00000519581 626 ntBASIC6.18□□□□□ -1.42
COL4A1P02462 NMNAT1P1-201ENST00000554095 876 ntBASIC6.18□□□□□ -1.42
COL4A1P02462 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC6.18□□□□□ -1.42
COL4A1P02462 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC6.18□□□□□ -1.42
COL4A1P02462 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms