Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
TNFP01375 AC079298.1-201ENST00000625026 1619 ntBASIC5.17□□□□□ -1.58
TNFP01375 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC5.17□□□□□ -1.58
TNFP01375 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
TNFP01375 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
TNFP01375 RNU6ATAC7P-201ENST00000408111 127 ntBASIC5.17□□□□□ -1.58
TNFP01375 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC5.17□□□□□ -1.58
TNFP01375 AC021876.1-201ENST00000425959 359 ntBASIC5.17□□□□□ -1.58
TNFP01375 RPS29P10-201ENST00000439197 166 ntBASIC5.17□□□□□ -1.58
TNFP01375 AL359265.1-201ENST00000440296 795 ntBASIC5.17□□□□□ -1.58
TNFP01375 EIF4EBP2P1-201ENST00000450009 343 ntBASIC5.17□□□□□ -1.58
TNFP01375 AC231760.1-201ENST00000498002 260 ntBASIC5.17□□□□□ -1.58
TNFP01375 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC5.17□□□□□ -1.58
TNFP01375 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC5.17□□□□□ -1.58
TNFP01375 NDUFB5P1-201ENST00000508134 564 ntBASIC5.17□□□□□ -1.58
TNFP01375 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
TNFP01375 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC5.17□□□□□ -1.58
TNFP01375 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
TNFP01375 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
TNFP01375 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
TNFP01375 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC5.17□□□□□ -1.58
TNFP01375 BNIP3P32-201ENST00000600015 554 ntBASIC5.17□□□□□ -1.58
TNFP01375 AC004948.1-201ENST00000609858 672 ntBASIC5.17□□□□□ -1.58
TNFP01375 AC099654.6-201ENST00000636487 512 ntBASIC5.17□□□□□ -1.58
TNFP01375 AC100757.1-201ENST00000616872 1835 ntBASIC5.17□□□□□ -1.58
TNFP01375 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
TNFP01375 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
TNFP01375 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC5.17□□□□□ -1.58
TNFP01375 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
TNFP01375 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
TNFP01375 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.17□□□□□ -1.58
TNFP01375 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC5.17□□□□□ -1.58
TNFP01375 AC006206.1-201ENST00000544842 3387 ntBASIC5.16□□□□□ -1.58
TNFP01375 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
TNFP01375 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.16□□□□□ -1.58
TNFP01375 ABCC13-202ENST00000463099 3842 ntBASIC5.16□□□□□ -1.58
TNFP01375 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.16□□□□□ -1.58
TNFP01375 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
TNFP01375 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
TNFP01375 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
TNFP01375 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
TNFP01375 AC138907.8-201ENST00000623981 2256 ntBASIC5.16□□□□□ -1.58
TNFP01375 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.16□□□□□ -1.58
TNFP01375 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
TNFP01375 MUC2-202ENST00000613187 4845 ntBASIC5.16□□□□□ -1.58
TNFP01375 U3.3-201ENST00000362986 216 ntBASIC5.16□□□□□ -1.58
TNFP01375 CHMP1B2P-201ENST00000399581 597 ntBASIC5.16□□□□□ -1.58
TNFP01375 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC5.16□□□□□ -1.58
TNFP01375 AL133482.1-201ENST00000415988 498 ntBASIC5.16□□□□□ -1.58
TNFP01375 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC5.16□□□□□ -1.58
TNFP01375 AL161722.2-201ENST00000434731 981 ntBASIC5.16□□□□□ -1.58
TNFP01375 CLUHP1-201ENST00000435012 1190 ntBASIC5.16□□□□□ -1.58
TNFP01375 VN1R54P-201ENST00000435210 1049 ntBASIC5.16□□□□□ -1.58
TNFP01375 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC5.16□□□□□ -1.58
TNFP01375 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC5.16□□□□□ -1.58
TNFP01375 OTX2P1-201ENST00000450956 354 ntBASIC5.16□□□□□ -1.58
TNFP01375 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC5.16□□□□□ -1.58
TNFP01375 AC090114.3-201ENST00000479267 829 ntBASIC5.16□□□□□ -1.58
TNFP01375 AC090058.1-201ENST00000498788 435 ntBASIC5.16□□□□□ -1.58
TNFP01375 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC5.16□□□□□ -1.58
TNFP01375 RN7SKP147-201ENST00000517154 244 ntBASIC5.16□□□□□ -1.58
TNFP01375 IGHVII-44-2-201ENST00000517728 250 ntBASIC5.16□□□□□ -1.58
TNFP01375 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC5.16□□□□□ -1.58
TNFP01375 AC022360.1-201ENST00000521058 340 ntBASIC5.16□□□□□ -1.58
TNFP01375 AC013701.1-201ENST00000522657 465 ntBASIC5.16□□□□□ -1.58
TNFP01375 AP000676.2-201ENST00000529711 301 ntBASIC5.16□□□□□ -1.58
TNFP01375 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC5.16□□□□□ -1.58
TNFP01375 AC133644.2-201ENST00000608142 540 ntBASIC5.16□□□□□ -1.58
TNFP01375 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC5.16□□□□□ -1.58
TNFP01375 EIF3FP1-201ENST00000613970 806 ntBASIC5.16□□□□□ -1.58
TNFP01375 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC5.16□□□□□ -1.58
TNFP01375 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC5.16□□□□□ -1.58
TNFP01375 AC000095.2-202ENST00000637415 154 ntBASIC5.16□□□□□ -1.58
TNFP01375 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.16□□□□□ -1.58
TNFP01375 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
TNFP01375 PANDAR-201ENST00000629595 1506 ntBASIC5.16□□□□□ -1.58
TNFP01375 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.16□□□□□ -1.58
TNFP01375 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
TNFP01375 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC5.16□□□□□ -1.58
TNFP01375 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.16□□□□□ -1.58
TNFP01375 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
TNFP01375 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
TNFP01375 AC112255.1-201ENST00000624070 2493 ntBASIC5.16□□□□□ -1.58
TNFP01375 NCOA4P2-201ENST00000340589 1813 ntBASIC5.16□□□□□ -1.58
TNFP01375 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
TNFP01375 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.58
TNFP01375 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
TNFP01375 AL022311.1-201ENST00000623726 19416 ntBASIC5.15□□□□□ -1.58
TNFP01375 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
TNFP01375 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC5.15□□□□□ -1.58
TNFP01375 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC5.15□□□□□ -1.58
TNFP01375 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
TNFP01375 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC5.15□□□□□ -1.58
TNFP01375 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC5.15□□□□□ -1.58
TNFP01375 THAP12P4-201ENST00000528321 2266 ntBASIC5.15□□□□□ -1.58
TNFP01375 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
TNFP01375 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
TNFP01375 RN7SKP185-201ENST00000362813 326 ntBASIC5.15□□□□□ -1.59
TNFP01375 RNU1-146P-201ENST00000364015 165 ntBASIC5.15□□□□□ -1.59
TNFP01375 RNU4-4P-201ENST00000364588 130 ntBASIC5.15□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms