Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC5.59□□□□□ -1.51
PDGFBP01127 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
PDGFBP01127 ALB-219ENST00000621085 1418 ntTSL 5 BASIC5.59□□□□□ -1.51
PDGFBP01127 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
PDGFBP01127 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
PDGFBP01127 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
PDGFBP01127 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
PDGFBP01127 RNA5SP505-201ENST00000364748 108 ntBASIC5.59□□□□□ -1.51
PDGFBP01127 AL353625.1-202ENST00000366273 571 ntBASIC5.59□□□□□ -1.51
PDGFBP01127 AC019050.1-201ENST00000418508 492 ntBASIC5.59□□□□□ -1.51
PDGFBP01127 AC117434.1-201ENST00000419971 836 ntBASIC5.59□□□□□ -1.51
PDGFBP01127 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC5.59□□□□□ -1.51
PDGFBP01127 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC5.59□□□□□ -1.51
PDGFBP01127 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC5.59□□□□□ -1.51
PDGFBP01127 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC5.59□□□□□ -1.51
PDGFBP01127 ASNSP4-201ENST00000511103 447 ntBASIC5.59□□□□□ -1.51
PDGFBP01127 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC5.59□□□□□ -1.51
PDGFBP01127 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC5.59□□□□□ -1.51
PDGFBP01127 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC5.59□□□□□ -1.51
PDGFBP01127 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC5.59□□□□□ -1.51
PDGFBP01127 HNRNPRP2-201ENST00000528421 743 ntBASIC5.59□□□□□ -1.51
PDGFBP01127 DUX4L52-201ENST00000549363 777 ntBASIC5.59□□□□□ -1.51
PDGFBP01127 NMNAT1P5-201ENST00000559657 841 ntBASIC5.59□□□□□ -1.51
PDGFBP01127 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC5.59□□□□□ -1.51
PDGFBP01127 MIR1254-2-201ENST00000579553 63 ntBASIC5.59□□□□□ -1.51
PDGFBP01127 AL161616.1-201ENST00000611867 286 ntBASIC5.59□□□□□ -1.51
PDGFBP01127 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC5.59□□□□□ -1.51
PDGFBP01127 AC016717.3-201ENST00000624730 554 ntBASIC5.59□□□□□ -1.51
PDGFBP01127 CASC22-202ENST00000628396 802 ntTSL 5 BASIC5.59□□□□□ -1.51
PDGFBP01127 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.59□□□□□ -1.51
PDGFBP01127 AL731556.1-201ENST00000394628 3711 ntBASIC5.59□□□□□ -1.51
PDGFBP01127 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
PDGFBP01127 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC5.59□□□□□ -1.52
PDGFBP01127 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC5.59□□□□□ -1.52
PDGFBP01127 AC007159.1-201ENST00000566529 4706 ntBASIC5.59□□□□□ -1.52
PDGFBP01127 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.58□□□□□ -1.52
PDGFBP01127 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC5.58□□□□□ -1.52
PDGFBP01127 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC5.58□□□□□ -1.52
PDGFBP01127 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC5.58□□□□□ -1.52
PDGFBP01127 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
PDGFBP01127 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
PDGFBP01127 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC5.58□□□□□ -1.52
PDGFBP01127 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
PDGFBP01127 AC005225.5-201ENST00000623547 2225 ntBASIC5.58□□□□□ -1.52
PDGFBP01127 ZNF720-202ENST00000398696 1339 ntTSL 4 BASIC5.58□□□□□ -1.52
PDGFBP01127 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
PDGFBP01127 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
PDGFBP01127 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC5.58□□□□□ -1.52
PDGFBP01127 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
PDGFBP01127 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC5.58□□□□□ -1.52
PDGFBP01127 REREP1Y-201ENST00000422655 198 ntBASIC5.58□□□□□ -1.52
PDGFBP01127 OR5M12P-201ENST00000423388 929 ntBASIC5.58□□□□□ -1.52
PDGFBP01127 AC093655.2-201ENST00000425735 631 ntBASIC5.58□□□□□ -1.52
PDGFBP01127 REREP2Y-201ENST00000439103 200 ntBASIC5.58□□□□□ -1.52
PDGFBP01127 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC5.58□□□□□ -1.52
PDGFBP01127 ARAFP2-201ENST00000440565 559 ntBASIC5.58□□□□□ -1.52
PDGFBP01127 AC092801.1-201ENST00000443763 581 ntTSL 3 BASIC5.58□□□□□ -1.52
PDGFBP01127 NDUFAF4P2-201ENST00000445374 520 ntBASIC5.58□□□□□ -1.52
PDGFBP01127 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC5.58□□□□□ -1.52
PDGFBP01127 AC092647.2-201ENST00000452998 253 ntBASIC5.58□□□□□ -1.52
PDGFBP01127 MTCYBP14-201ENST00000457471 715 ntBASIC5.58□□□□□ -1.52
PDGFBP01127 AC103987.1-201ENST00000473394 348 ntBASIC5.58□□□□□ -1.52
PDGFBP01127 AL161747.1-201ENST00000480068 358 ntBASIC5.58□□□□□ -1.52
PDGFBP01127 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
PDGFBP01127 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
PDGFBP01127 RPL37AP8-201ENST00000494116 276 ntBASIC5.58□□□□□ -1.52
PDGFBP01127 MORF4L2P1-201ENST00000503761 858 ntBASIC5.58□□□□□ -1.52
PDGFBP01127 MTCO3P42-201ENST00000509488 518 ntBASIC5.58□□□□□ -1.52
PDGFBP01127 MTCO3P39-201ENST00000514812 518 ntBASIC5.58□□□□□ -1.52
PDGFBP01127 RN7SKP34-201ENST00000516142 244 ntBASIC5.58□□□□□ -1.52
PDGFBP01127 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC5.58□□□□□ -1.52
PDGFBP01127 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
PDGFBP01127 AP001804.2-201ENST00000533932 910 ntBASIC5.58□□□□□ -1.52
PDGFBP01127 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC5.58□□□□□ -1.52
PDGFBP01127 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC5.58□□□□□ -1.52
PDGFBP01127 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC5.58□□□□□ -1.52
PDGFBP01127 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC5.58□□□□□ -1.52
PDGFBP01127 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC5.58□□□□□ -1.52
PDGFBP01127 AC091905.4-201ENST00000623432 202 ntBASIC5.58□□□□□ -1.52
PDGFBP01127 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
PDGFBP01127 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC5.58□□□□□ -1.52
PDGFBP01127 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.58□□□□□ -1.52
PDGFBP01127 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
PDGFBP01127 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
PDGFBP01127 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
PDGFBP01127 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
PDGFBP01127 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC5.58□□□□□ -1.52
PDGFBP01127 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.58□□□□□ -1.52
PDGFBP01127 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
PDGFBP01127 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
PDGFBP01127 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
PDGFBP01127 CPS1-IT1-201ENST00000628368 2306 ntBASIC5.58□□□□□ -1.52
PDGFBP01127 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
PDGFBP01127 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
PDGFBP01127 AC022905.1-201ENST00000503430 3048 ntBASIC5.58□□□□□ -1.52
PDGFBP01127 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
PDGFBP01127 IRF5P1-201ENST00000504852 2164 ntBASIC5.57□□□□□ -1.52
PDGFBP01127 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
PDGFBP01127 NLRP3P1-201ENST00000622303 1785 ntBASIC5.57□□□□□ -1.52
PDGFBP01127 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 113 ms