Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 SFTPD-AS1-201ENST00000608229 5001 ntBASIC8.08□□□□□ -1.12
ALDH1A1P00352 LINC02275-201ENST00000508313 4365 ntTSL 2 BASIC8.08□□□□□ -1.12
ALDH1A1P00352 MRO-201ENST00000256425 5166 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
ALDH1A1P00352 DDX24-211ENST00000640432 2580 ntTSL 5 BASIC8.08□□□□□ -1.12
ALDH1A1P00352 MEF2C-222ENST00000514028 3393 ntTSL 5 BASIC8.08□□□□□ -1.12
ALDH1A1P00352 ZNF451-204ENST00000370708 9478 ntTSL 2 BASIC8.08□□□□□ -1.12
ALDH1A1P00352 ZNF888-202ENST00000638862 4195 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
ALDH1A1P00352 CTAGE1-201ENST00000391403 4313 ntAPPRIS P2 BASIC8.08□□□□□ -1.12
ALDH1A1P00352 MAPRE2-203ENST00000436190 4323 ntTSL 2 BASIC8.08□□□□□ -1.12
ALDH1A1P00352 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
ALDH1A1P00352 AC103591.2-201ENST00000265259 766 ntBASIC8.08□□□□□ -1.12
ALDH1A1P00352 FABP3-201ENST00000373713 725 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
ALDH1A1P00352 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
ALDH1A1P00352 LSM5-205ENST00000409952 687 ntTSL 4 BASIC8.08□□□□□ -1.12
ALDH1A1P00352 RNA5SP80-201ENST00000410475 111 ntBASIC8.08□□□□□ -1.12
ALDH1A1P00352 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC8.08□□□□□ -1.12
ALDH1A1P00352 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC8.08□□□□□ -1.12
ALDH1A1P00352 HMGB3P23-201ENST00000414981 585 ntBASIC8.08□□□□□ -1.12
ALDH1A1P00352 GEMIN2P2-201ENST00000418195 715 ntBASIC8.08□□□□□ -1.12
ALDH1A1P00352 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC8.08□□□□□ -1.12
ALDH1A1P00352 NUP35P1-201ENST00000422734 947 ntBASIC8.08□□□□□ -1.12
ALDH1A1P00352 OR5AW1P-201ENST00000426334 1006 ntBASIC8.08□□□□□ -1.12
ALDH1A1P00352 GPM6BP2-201ENST00000432046 144 ntBASIC8.08□□□□□ -1.12
ALDH1A1P00352 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
ALDH1A1P00352 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC8.08□□□□□ -1.12
ALDH1A1P00352 GPM6BP1-201ENST00000446387 144 ntBASIC8.08□□□□□ -1.12
ALDH1A1P00352 RBMY3AP-201ENST00000449381 1145 ntBASIC8.08□□□□□ -1.12
ALDH1A1P00352 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC8.08□□□□□ -1.12
ALDH1A1P00352 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
ALDH1A1P00352 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC8.08□□□□□ -1.12
ALDH1A1P00352 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC8.08□□□□□ -1.12
ALDH1A1P00352 AL590639.1-201ENST00000456484 337 ntBASIC8.08□□□□□ -1.12
ALDH1A1P00352 AL138787.2-201ENST00000466576 367 ntTSL 3 BASIC8.08□□□□□ -1.12
ALDH1A1P00352 RN7SL413P-201ENST00000482700 297 ntBASIC8.08□□□□□ -1.12
ALDH1A1P00352 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC8.08□□□□□ -1.12
ALDH1A1P00352 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC8.08□□□□□ -1.12
ALDH1A1P00352 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC8.08□□□□□ -1.12
ALDH1A1P00352 AC009646.1-201ENST00000510455 318 ntBASIC8.08□□□□□ -1.12
ALDH1A1P00352 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
ALDH1A1P00352 AC093677.1-201ENST00000514414 678 ntBASIC8.08□□□□□ -1.12
ALDH1A1P00352 SNORA74.1-201ENST00000516320 180 ntBASIC8.08□□□□□ -1.12
ALDH1A1P00352 IGHV7-34-1-201ENST00000519200 350 ntBASIC8.08□□□□□ -1.12
ALDH1A1P00352 CBX3P5-201ENST00000552017 521 ntBASIC8.08□□□□□ -1.12
ALDH1A1P00352 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC8.08□□□□□ -1.12
ALDH1A1P00352 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC8.08□□□□□ -1.12
ALDH1A1P00352 HMGB1P33-201ENST00000563485 527 ntBASIC8.08□□□□□ -1.12
ALDH1A1P00352 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC8.08□□□□□ -1.12
ALDH1A1P00352 RN7SL178P-201ENST00000582930 304 ntBASIC8.08□□□□□ -1.12
ALDH1A1P00352 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC8.08□□□□□ -1.12
ALDH1A1P00352 AC006006.1-201ENST00000603082 144 ntBASIC8.08□□□□□ -1.12
ALDH1A1P00352 AC233280.2-201ENST00000603917 1070 ntBASIC8.08□□□□□ -1.12
ALDH1A1P00352 AL590282.1-201ENST00000610379 1136 ntBASIC8.08□□□□□ -1.12
ALDH1A1P00352 5S_rRNA.23-201ENST00000612086 102 ntBASIC8.08□□□□□ -1.12
ALDH1A1P00352 AF001550.2-201ENST00000636643 217 ntBASIC8.08□□□□□ -1.12
ALDH1A1P00352 KIF14-202ENST00000614960 6838 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
ALDH1A1P00352 AC007823.1-201ENST00000569932 1566 ntBASIC8.08□□□□□ -1.12
ALDH1A1P00352 KIF21A-204ENST00000544797 5040 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
ALDH1A1P00352 ACOD1-201ENST00000377462 2165 ntAPPRIS P2 TSL 5 BASIC8.08□□□□□ -1.12
ALDH1A1P00352 MID1-204ENST00000380782 3352 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
ALDH1A1P00352 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
ALDH1A1P00352 GC-201ENST00000273951 1972 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
ALDH1A1P00352 POF1B-202ENST00000373145 1972 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
ALDH1A1P00352 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC8.08□□□□□ -1.12
ALDH1A1P00352 ZNF33A-204ENST00000458705 6084 ntAPPRIS P3 TSL 1 (best) BASIC8.08□□□□□ -1.12
ALDH1A1P00352 AC006305.1-201ENST00000382897 2558 ntTSL 2 BASIC8.08□□□□□ -1.12
ALDH1A1P00352 LAX1-203ENST00000442561 3023 ntAPPRIS P3 TSL 1 (best) BASIC8.08□□□□□ -1.12
ALDH1A1P00352 TCF4-246ENST00000570287 3163 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
ALDH1A1P00352 SNCAIP-201ENST00000261367 4986 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
ALDH1A1P00352 HMGB4-204ENST00000522796 2505 ntAPPRIS P1 TSL 5 BASIC8.07□□□□□ -1.12
ALDH1A1P00352 KIF6-208ENST00000538893 2386 ntTSL 5 BASIC8.07□□□□□ -1.12
ALDH1A1P00352 GCNT2-216ENST00000495262 2214 ntAPPRIS ALT1 TSL 2 BASIC8.07□□□□□ -1.12
ALDH1A1P00352 MYLK4-201ENST00000274643 5806 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
ALDH1A1P00352 FAM111B-201ENST00000343597 3488 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
ALDH1A1P00352 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC8.07□□□□□ -1.12
ALDH1A1P00352 PIGN-233ENST00000639342 4305 ntTSL 5 BASIC8.07□□□□□ -1.12
ALDH1A1P00352 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC8.07□□□□□ -1.12
ALDH1A1P00352 TSC22D1-213ENST00000622051 2872 ntTSL 2 BASIC8.07□□□□□ -1.12
ALDH1A1P00352 OXCT1-206ENST00000512084 1593 ntTSL 2 BASIC8.07□□□□□ -1.12
ALDH1A1P00352 TMEM135-201ENST00000305494 2433 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
ALDH1A1P00352 WDR44-201ENST00000254029 4111 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
ALDH1A1P00352 GRIN2A-205ENST00000535259 4118 ntTSL 5 BASIC8.07□□□□□ -1.12
ALDH1A1P00352 A1CF-201ENST00000282641 9350 ntAPPRIS ALT1 TSL 2 BASIC8.07□□□□□ -1.12
ALDH1A1P00352 ATP6V0E1-201ENST00000265093 773 ntTSL 2 BASIC8.07□□□□□ -1.12
ALDH1A1P00352 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
ALDH1A1P00352 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
ALDH1A1P00352 Y_RNA.132-201ENST00000363421 102 ntBASIC8.07□□□□□ -1.12
ALDH1A1P00352 RNU6-660P-201ENST00000364566 109 ntBASIC8.07□□□□□ -1.12
ALDH1A1P00352 RNA5SP279-201ENST00000365513 117 ntBASIC8.07□□□□□ -1.12
ALDH1A1P00352 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC8.07□□□□□ -1.12
ALDH1A1P00352 RNU6-1122P-201ENST00000384449 107 ntBASIC8.07□□□□□ -1.12
ALDH1A1P00352 RNU6-297P-201ENST00000384636 107 ntBASIC8.07□□□□□ -1.12
ALDH1A1P00352 AL391422.1-201ENST00000402155 436 ntBASIC8.07□□□□□ -1.12
ALDH1A1P00352 RNU6-248P-201ENST00000410720 107 ntBASIC8.07□□□□□ -1.12
ALDH1A1P00352 AC069157.1-201ENST00000421749 137 ntBASIC8.07□□□□□ -1.12
ALDH1A1P00352 AC099782.1-201ENST00000425889 474 ntBASIC8.07□□□□□ -1.12
ALDH1A1P00352 ETF1P3-201ENST00000430422 1160 ntBASIC8.07□□□□□ -1.12
ALDH1A1P00352 AL513304.1-201ENST00000432987 359 ntTSL 3 BASIC8.07□□□□□ -1.12
ALDH1A1P00352 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC8.07□□□□□ -1.12
ALDH1A1P00352 LIX1L-AS1-206ENST00000447686 846 ntTSL 2 BASIC8.07□□□□□ -1.12
ALDH1A1P00352 AC115223.1-201ENST00000466377 870 ntBASIC8.07□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms