Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 MIR378H-201ENST00000579966 83 ntBASIC8.06□□□□□ -1.12
HOXA2O43364 AC018638.8-201ENST00000588755 281 ntBASIC8.06□□□□□ -1.12
HOXA2O43364 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC8.06□□□□□ -1.12
HOXA2O43364 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC8.06□□□□□ -1.12
HOXA2O43364 AC243960.4-201ENST00000600532 288 ntBASIC8.06□□□□□ -1.12
HOXA2O43364 AC053481.5-201ENST00000602932 397 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
HOXA2O43364 AC090948.2-201ENST00000607363 564 ntBASIC8.06□□□□□ -1.12
HOXA2O43364 AC093788.1-201ENST00000609356 927 ntBASIC8.06□□□□□ -1.12
HOXA2O43364 MIR6070-201ENST00000613967 103 ntBASIC8.06□□□□□ -1.12
HOXA2O43364 AC104010.1-201ENST00000616889 150 ntBASIC8.06□□□□□ -1.12
HOXA2O43364 AC244100.4-201ENST00000617747 388 ntBASIC8.06□□□□□ -1.12
HOXA2O43364 AC243756.2-201ENST00000618406 463 ntBASIC8.06□□□□□ -1.12
HOXA2O43364 AC129778.1-202ENST00000623812 261 ntBASIC8.06□□□□□ -1.12
HOXA2O43364 AL591379.1-207ENST00000635982 261 ntBASIC8.06□□□□□ -1.12
HOXA2O43364 AMYH02020865.1-205ENST00000636189 261 ntBASIC8.06□□□□□ -1.12
HOXA2O43364 MIR1302-1-201ENST00000637932 143 ntBASIC8.06□□□□□ -1.12
HOXA2O43364 EPYC-201ENST00000261172 1539 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
HOXA2O43364 CASP10-203ENST00000313728 1521 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
HOXA2O43364 SERPINA9-205ENST00000448305 1520 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
HOXA2O43364 AC009948.3-201ENST00000603415 1798 ntBASIC8.06□□□□□ -1.12
HOXA2O43364 GABRQ-201ENST00000598523 6172 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
HOXA2O43364 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
HOXA2O43364 AGBL4-203ENST00000371838 1353 ntAPPRIS ALT2 TSL 5 BASIC8.06□□□□□ -1.12
HOXA2O43364 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC8.06□□□□□ -1.12
HOXA2O43364 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC8.06□□□□□ -1.12
HOXA2O43364 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC8.06□□□□□ -1.12
HOXA2O43364 LINC01091-204ENST00000515769 2204 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
HOXA2O43364 AF254983.1-201ENST00000612267 3336 ntTSL 5 BASIC8.06□□□□□ -1.12
HOXA2O43364 EFCAB7-201ENST00000371088 2313 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
HOXA2O43364 PDIK1L-202ENST00000374271 4279 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
HOXA2O43364 ZNF3-202ENST00000299667 2799 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
HOXA2O43364 CD46-205ENST00000358170 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
HOXA2O43364 RECQL-204ENST00000444129 3702 ntAPPRIS P1 TSL 2 BASIC8.05□□□□□ -1.12
HOXA2O43364 TLN2-209ENST00000561311 11880 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
HOXA2O43364 HRG-201ENST00000232003 2015 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
HOXA2O43364 AL365204.1-201ENST00000423440 1430 ntTSL 5 BASIC8.05□□□□□ -1.12
HOXA2O43364 GCNT3-201ENST00000396065 4933 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
HOXA2O43364 LINC02209-201ENST00000521245 2651 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
HOXA2O43364 OR4A15-201ENST00000314706 1035 ntBASIC8.05□□□□□ -1.12
HOXA2O43364 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
HOXA2O43364 Y_RNA.67-201ENST00000362870 100 ntBASIC8.05□□□□□ -1.12
HOXA2O43364 RPS3AP5-201ENST00000389400 821 ntBASIC8.05□□□□□ -1.12
HOXA2O43364 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC8.05□□□□□ -1.12
HOXA2O43364 AL953862.1-201ENST00000423016 168 ntBASIC8.05□□□□□ -1.12
HOXA2O43364 RPL7P56-201ENST00000429441 717 ntBASIC8.05□□□□□ -1.12
HOXA2O43364 AC019211.1-201ENST00000432993 754 ntTSL 3 BASIC8.05□□□□□ -1.12
HOXA2O43364 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC8.05□□□□□ -1.12
HOXA2O43364 AL356133.1-201ENST00000444762 372 ntBASIC8.05□□□□□ -1.12
HOXA2O43364 AC003035.2-201ENST00000448948 696 ntTSL 3 BASIC8.05□□□□□ -1.12
HOXA2O43364 Z82190.1-201ENST00000454534 490 ntBASIC8.05□□□□□ -1.12
HOXA2O43364 RPL18AP17-201ENST00000455326 198 ntBASIC8.05□□□□□ -1.12
HOXA2O43364 AC005550.2-201ENST00000476382 318 ntBASIC8.05□□□□□ -1.12
HOXA2O43364 RPS4XP17-201ENST00000479057 754 ntBASIC8.05□□□□□ -1.12
HOXA2O43364 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC8.05□□□□□ -1.12
HOXA2O43364 AC079594.1-201ENST00000489757 331 ntBASIC8.05□□□□□ -1.12
HOXA2O43364 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC8.05□□□□□ -1.12
HOXA2O43364 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC8.05□□□□□ -1.12
HOXA2O43364 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC8.05□□□□□ -1.12
HOXA2O43364 AC022784.1-201ENST00000512942 699 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
HOXA2O43364 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC8.05□□□□□ -1.12
HOXA2O43364 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC8.05□□□□□ -1.12
HOXA2O43364 AC008429.4-201ENST00000521201 182 ntBASIC8.05□□□□□ -1.12
HOXA2O43364 AC104009.1-201ENST00000528009 635 ntTSL 3 BASIC8.05□□□□□ -1.12
HOXA2O43364 PHBP2-201ENST00000532859 806 ntBASIC8.05□□□□□ -1.12
HOXA2O43364 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC8.05□□□□□ -1.12
HOXA2O43364 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC8.05□□□□□ -1.12
HOXA2O43364 AC021979.2-201ENST00000553644 209 ntTSL 5 BASIC8.05□□□□□ -1.12
HOXA2O43364 C14orf2-209ENST00000554880 707 ntAPPRIS P1 TSL 3 BASIC8.05□□□□□ -1.12
HOXA2O43364 AL358334.3-201ENST00000557343 535 ntTSL 3 BASIC8.05□□□□□ -1.12
HOXA2O43364 AC079075.2-201ENST00000557964 449 ntTSL 4 BASIC8.05□□□□□ -1.12
HOXA2O43364 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC8.05□□□□□ -1.12
HOXA2O43364 IQCK-206ENST00000564186 882 ntAPPRIS ALT2 TSL 2 BASIC8.05□□□□□ -1.12
HOXA2O43364 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC8.05□□□□□ -1.12
HOXA2O43364 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC8.05□□□□□ -1.12
HOXA2O43364 AL163952.1-202ENST00000569625 600 ntBASIC8.05□□□□□ -1.12
HOXA2O43364 AC004494.1-202ENST00000573820 480 ntTSL 4 BASIC8.05□□□□□ -1.12
HOXA2O43364 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC8.05□□□□□ -1.12
HOXA2O43364 AC245014.2-201ENST00000603689 287 ntBASIC8.05□□□□□ -1.12
HOXA2O43364 AC246785.4-201ENST00000605374 287 ntBASIC8.05□□□□□ -1.12
HOXA2O43364 AL133255.1-201ENST00000606374 441 ntBASIC8.05□□□□□ -1.12
HOXA2O43364 AC234782.5-201ENST00000617723 324 ntBASIC8.05□□□□□ -1.12
HOXA2O43364 AC244100.1-201ENST00000618141 407 ntTSL 5 BASIC8.05□□□□□ -1.12
HOXA2O43364 AC091905.1-201ENST00000624400 311 ntBASIC8.05□□□□□ -1.12
HOXA2O43364 CYP2C8-213ENST00000628935 924 ntTSL 5 BASIC8.05□□□□□ -1.12
HOXA2O43364 MAPK6PS2-201ENST00000379571 2060 ntBASIC8.05□□□□□ -1.12
HOXA2O43364 KLHL8-208ENST00000512111 3245 ntAPPRIS P1 TSL 2 BASIC8.05□□□□□ -1.12
HOXA2O43364 SCN9A-201ENST00000303354 9786 ntAPPRIS ALT1 TSL 5 BASIC8.05□□□□□ -1.12
HOXA2O43364 SCN9A-202ENST00000409435 5967 ntAPPRIS ALT1 TSL 5 BASIC8.05□□□□□ -1.12
HOXA2O43364 CCDC150-201ENST00000389175 3685 ntAPPRIS P2 TSL 5 BASIC8.05□□□□□ -1.12
HOXA2O43364 ARHGEF3-214ENST00000497267 2197 ntTSL 2 BASIC8.05□□□□□ -1.12
HOXA2O43364 LIMA1-216ENST00000552909 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
HOXA2O43364 GDF9-202ENST00000378673 2640 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
HOXA2O43364 AMPD3-204ENST00000444303 3994 ntTSL 2 BASIC8.05□□□□□ -1.12
HOXA2O43364 AC011294.1-202ENST00000451905 1947 ntTSL 2 BASIC8.05□□□□□ -1.12
HOXA2O43364 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC8.05□□□□□ -1.12
HOXA2O43364 CTNND1-231ENST00000532463 5749 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
HOXA2O43364 ERAP1-202ENST00000443439 4805 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
HOXA2O43364 HKR1-223ENST00000591471 3472 ntTSL 2 BASIC8.05□□□□□ -1.12
HOXA2O43364 SLC15A1-202ENST00000376503 3106 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
HOXA2O43364 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 119.7 ms