Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 AP000797.2-201ENST00000475768 606 ntBASIC4.35□□□□□ -1.71
TCRBV4S1A1TA0A5B7 ATG10-208ENST00000513634 618 ntTSL 2 BASIC4.35□□□□□ -1.71
TCRBV4S1A1TA0A5B7 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC4.35□□□□□ -1.71
TCRBV4S1A1TA0A5B7 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC4.35□□□□□ -1.71
TCRBV4S1A1TA0A5B7 CASC19-203ENST00000523510 575 ntTSL 3 BASIC4.35□□□□□ -1.71
TCRBV4S1A1TA0A5B7 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC4.35□□□□□ -1.71
TCRBV4S1A1TA0A5B7 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC4.35□□□□□ -1.71
TCRBV4S1A1TA0A5B7 APPL2-203ENST00000546731 684 ntTSL 2 BASIC4.35□□□□□ -1.71
TCRBV4S1A1TA0A5B7 AL049779.2-201ENST00000553847 315 ntBASIC4.35□□□□□ -1.71
TCRBV4S1A1TA0A5B7 HSPE1P2-201ENST00000554777 306 ntBASIC4.35□□□□□ -1.71
TCRBV4S1A1TA0A5B7 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC4.35□□□□□ -1.71
TCRBV4S1A1TA0A5B7 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC4.35□□□□□ -1.71
TCRBV4S1A1TA0A5B7 AC012616.1-201ENST00000600294 197 ntBASIC4.35□□□□□ -1.71
TCRBV4S1A1TA0A5B7 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC4.35□□□□□ -1.71
TCRBV4S1A1TA0A5B7 AL359513.1-201ENST00000614364 557 ntBASIC4.35□□□□□ -1.71
TCRBV4S1A1TA0A5B7 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC4.35□□□□□ -1.71
TCRBV4S1A1TA0A5B7 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC4.35□□□□□ -1.71
TCRBV4S1A1TA0A5B7 CCT5-215ENST00000625723 135 ntTSL 5 BASIC4.35□□□□□ -1.71
TCRBV4S1A1TA0A5B7 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
TCRBV4S1A1TA0A5B7 WAC-209ENST00000428935 1320 ntTSL 2 BASIC4.35□□□□□ -1.71
TCRBV4S1A1TA0A5B7 CR383656.5-201ENST00000547616 1340 ntBASIC4.35□□□□□ -1.71
TCRBV4S1A1TA0A5B7 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC4.35□□□□□ -1.71
TCRBV4S1A1TA0A5B7 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC4.35□□□□□ -1.71
TCRBV4S1A1TA0A5B7 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
TCRBV4S1A1TA0A5B7 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC4.35□□□□□ -1.71
TCRBV4S1A1TA0A5B7 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
TCRBV4S1A1TA0A5B7 AC112198.2-201ENST00000426589 6996 ntBASIC4.35□□□□□ -1.71
TCRBV4S1A1TA0A5B7 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC4.35□□□□□ -1.71
TCRBV4S1A1TA0A5B7 MRRFP1-201ENST00000435941 1675 ntBASIC4.35□□□□□ -1.71
TCRBV4S1A1TA0A5B7 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
TCRBV4S1A1TA0A5B7 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
TCRBV4S1A1TA0A5B7 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
TCRBV4S1A1TA0A5B7 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
TCRBV4S1A1TA0A5B7 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
TCRBV4S1A1TA0A5B7 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC4.34□□□□□ -1.71
TCRBV4S1A1TA0A5B7 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
TCRBV4S1A1TA0A5B7 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC4.34□□□□□ -1.71
TCRBV4S1A1TA0A5B7 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
TCRBV4S1A1TA0A5B7 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
TCRBV4S1A1TA0A5B7 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC4.34□□□□□ -1.71
TCRBV4S1A1TA0A5B7 MIR223-201ENST00000385204 110 ntBASIC4.34□□□□□ -1.71
TCRBV4S1A1TA0A5B7 RNU1-77P-201ENST00000390868 162 ntBASIC4.34□□□□□ -1.71
TCRBV4S1A1TA0A5B7 RNA5SP241-201ENST00000391326 114 ntBASIC4.34□□□□□ -1.71
TCRBV4S1A1TA0A5B7 PPIAP9-201ENST00000403866 498 ntBASIC4.34□□□□□ -1.71
TCRBV4S1A1TA0A5B7 RPL35AP24-201ENST00000413846 330 ntBASIC4.34□□□□□ -1.71
TCRBV4S1A1TA0A5B7 BMS1P13-201ENST00000417301 885 ntBASIC4.34□□□□□ -1.71
TCRBV4S1A1TA0A5B7 AL133325.1-201ENST00000421090 382 ntBASIC4.34□□□□□ -1.71
TCRBV4S1A1TA0A5B7 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
TCRBV4S1A1TA0A5B7 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC4.34□□□□□ -1.71
TCRBV4S1A1TA0A5B7 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC4.34□□□□□ -1.71
TCRBV4S1A1TA0A5B7 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
TCRBV4S1A1TA0A5B7 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC4.34□□□□□ -1.71
TCRBV4S1A1TA0A5B7 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC4.34□□□□□ -1.71
TCRBV4S1A1TA0A5B7 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC4.34□□□□□ -1.71
TCRBV4S1A1TA0A5B7 OR5M14P-201ENST00000506803 618 ntBASIC4.34□□□□□ -1.71
TCRBV4S1A1TA0A5B7 AC098976.1-201ENST00000513014 541 ntBASIC4.34□□□□□ -1.71
TCRBV4S1A1TA0A5B7 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC4.34□□□□□ -1.71
TCRBV4S1A1TA0A5B7 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC4.34□□□□□ -1.71
TCRBV4S1A1TA0A5B7 RNA5SP230-201ENST00000517039 122 ntBASIC4.34□□□□□ -1.71
TCRBV4S1A1TA0A5B7 FTH1P11-201ENST00000517577 551 ntBASIC4.34□□□□□ -1.71
TCRBV4S1A1TA0A5B7 CDC42P3-201ENST00000518493 633 ntBASIC4.34□□□□□ -1.71
TCRBV4S1A1TA0A5B7 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC4.34□□□□□ -1.71
TCRBV4S1A1TA0A5B7 AC020937.1-201ENST00000519677 1013 ntBASIC4.34□□□□□ -1.71
TCRBV4S1A1TA0A5B7 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC4.34□□□□□ -1.71
TCRBV4S1A1TA0A5B7 WDR61-205ENST00000558459 884 ntTSL 3 BASIC4.34□□□□□ -1.71
TCRBV4S1A1TA0A5B7 RN7SL290P-201ENST00000578661 300 ntBASIC4.34□□□□□ -1.71
TCRBV4S1A1TA0A5B7 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC4.34□□□□□ -1.71
TCRBV4S1A1TA0A5B7 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC4.34□□□□□ -1.71
TCRBV4S1A1TA0A5B7 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC4.34□□□□□ -1.71
TCRBV4S1A1TA0A5B7 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC4.34□□□□□ -1.71
TCRBV4S1A1TA0A5B7 AC009237.13-201ENST00000603193 276 ntBASIC4.34□□□□□ -1.71
TCRBV4S1A1TA0A5B7 AL512329.2-201ENST00000607350 548 ntBASIC4.34□□□□□ -1.71
TCRBV4S1A1TA0A5B7 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
TCRBV4S1A1TA0A5B7 PHACTR2P1-201ENST00000605639 1414 ntBASIC4.34□□□□□ -1.71
TCRBV4S1A1TA0A5B7 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC4.34□□□□□ -1.71
TCRBV4S1A1TA0A5B7 C4BPAP1-201ENST00000415474 1893 ntBASIC4.34□□□□□ -1.71
TCRBV4S1A1TA0A5B7 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
TCRBV4S1A1TA0A5B7 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
TCRBV4S1A1TA0A5B7 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC4.34□□□□□ -1.72
TCRBV4S1A1TA0A5B7 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
TCRBV4S1A1TA0A5B7 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
TCRBV4S1A1TA0A5B7 LINC01963-201ENST00000562038 3148 ntBASIC4.34□□□□□ -1.72
TCRBV4S1A1TA0A5B7 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
TCRBV4S1A1TA0A5B7 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC4.34□□□□□ -1.72
TCRBV4S1A1TA0A5B7 AC092376.2-201ENST00000622621 4116 ntBASIC4.34□□□□□ -1.72
TCRBV4S1A1TA0A5B7 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC4.34□□□□□ -1.72
TCRBV4S1A1TA0A5B7 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC4.33□□□□□ -1.72
TCRBV4S1A1TA0A5B7 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC4.33□□□□□ -1.72
TCRBV4S1A1TA0A5B7 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC4.33□□□□□ -1.72
TCRBV4S1A1TA0A5B7 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
TCRBV4S1A1TA0A5B7 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
TCRBV4S1A1TA0A5B7 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
TCRBV4S1A1TA0A5B7 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
TCRBV4S1A1TA0A5B7 AC100757.1-201ENST00000616872 1835 ntBASIC4.33□□□□□ -1.72
TCRBV4S1A1TA0A5B7 AL590763.1-201ENST00000398297 1545 ntBASIC4.33□□□□□ -1.72
TCRBV4S1A1TA0A5B7 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC4.33□□□□□ -1.72
TCRBV4S1A1TA0A5B7 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
TCRBV4S1A1TA0A5B7 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC4.33□□□□□ -1.72
TCRBV4S1A1TA0A5B7 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
TCRBV4S1A1TA0A5B7 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 189.4 ms