Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
RHBDD3Q9Y3P4 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
RHBDD3Q9Y3P4 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
RHBDD3Q9Y3P4 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC4.81□□□□□ -1.64
RHBDD3Q9Y3P4 LARS-201ENST00000274562 2213 ntTSL 2 BASIC4.81□□□□□ -1.64
RHBDD3Q9Y3P4 AC106872.5-201ENST00000508856 1416 ntBASIC4.8□□□□□ -1.64
RHBDD3Q9Y3P4 AC093591.2-201ENST00000565254 3843 ntBASIC4.8□□□□□ -1.64
RHBDD3Q9Y3P4 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC4.8□□□□□ -1.64
RHBDD3Q9Y3P4 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
RHBDD3Q9Y3P4 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
RHBDD3Q9Y3P4 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
RHBDD3Q9Y3P4 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
RHBDD3Q9Y3P4 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
RHBDD3Q9Y3P4 RNA5SP187-201ENST00000384400 119 ntBASIC4.8□□□□□ -1.64
RHBDD3Q9Y3P4 PPIAP9-201ENST00000403866 498 ntBASIC4.8□□□□□ -1.64
RHBDD3Q9Y3P4 RPSAP35-201ENST00000413753 818 ntBASIC4.8□□□□□ -1.64
RHBDD3Q9Y3P4 RAB9AP4-201ENST00000415230 609 ntBASIC4.8□□□□□ -1.64
RHBDD3Q9Y3P4 EEF1A1P29-201ENST00000416082 1096 ntBASIC4.8□□□□□ -1.64
RHBDD3Q9Y3P4 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC4.8□□□□□ -1.64
RHBDD3Q9Y3P4 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC4.8□□□□□ -1.64
RHBDD3Q9Y3P4 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC4.8□□□□□ -1.64
RHBDD3Q9Y3P4 AC090804.1-201ENST00000448870 490 ntBASIC4.8□□□□□ -1.64
RHBDD3Q9Y3P4 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC4.8□□□□□ -1.64
RHBDD3Q9Y3P4 CSNK1A1P3-201ENST00000504105 330 ntBASIC4.8□□□□□ -1.64
RHBDD3Q9Y3P4 RNU6-615P-201ENST00000516065 106 ntBASIC4.8□□□□□ -1.64
RHBDD3Q9Y3P4 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC4.8□□□□□ -1.64
RHBDD3Q9Y3P4 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC4.8□□□□□ -1.64
RHBDD3Q9Y3P4 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC4.8□□□□□ -1.64
RHBDD3Q9Y3P4 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC4.8□□□□□ -1.64
RHBDD3Q9Y3P4 MTND2P13-201ENST00000577438 1039 ntBASIC4.8□□□□□ -1.64
RHBDD3Q9Y3P4 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC4.8□□□□□ -1.64
RHBDD3Q9Y3P4 AL022394.1-201ENST00000606979 292 ntBASIC4.8□□□□□ -1.64
RHBDD3Q9Y3P4 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC4.8□□□□□ -1.64
RHBDD3Q9Y3P4 SRRM1P3-201ENST00000426911 2678 ntBASIC4.8□□□□□ -1.64
RHBDD3Q9Y3P4 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC4.8□□□□□ -1.64
RHBDD3Q9Y3P4 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
RHBDD3Q9Y3P4 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
RHBDD3Q9Y3P4 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
RHBDD3Q9Y3P4 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
RHBDD3Q9Y3P4 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
RHBDD3Q9Y3P4 OSBPL9P1-201ENST00000604744 1469 ntBASIC4.8□□□□□ -1.64
RHBDD3Q9Y3P4 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC4.8□□□□□ -1.64
RHBDD3Q9Y3P4 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
RHBDD3Q9Y3P4 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
RHBDD3Q9Y3P4 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
RHBDD3Q9Y3P4 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC4.8□□□□□ -1.64
RHBDD3Q9Y3P4 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC4.8□□□□□ -1.64
RHBDD3Q9Y3P4 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC4.8□□□□□ -1.64
RHBDD3Q9Y3P4 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
RHBDD3Q9Y3P4 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
RHBDD3Q9Y3P4 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
RHBDD3Q9Y3P4 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC4.79□□□□□ -1.64
RHBDD3Q9Y3P4 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC4.79□□□□□ -1.64
RHBDD3Q9Y3P4 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
RHBDD3Q9Y3P4 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC4.79□□□□□ -1.64
RHBDD3Q9Y3P4 MT-RNR2-201ENST00000387347 1559 ntBASIC4.79□□□□□ -1.64
RHBDD3Q9Y3P4 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RHBDD3Q9Y3P4 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RHBDD3Q9Y3P4 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RHBDD3Q9Y3P4 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
RHBDD3Q9Y3P4 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC4.79□□□□□ -1.64
RHBDD3Q9Y3P4 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
RHBDD3Q9Y3P4 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RHBDD3Q9Y3P4 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC4.79□□□□□ -1.64
RHBDD3Q9Y3P4 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
RHBDD3Q9Y3P4 VDAC2P1-201ENST00000399358 958 ntBASIC4.79□□□□□ -1.64
RHBDD3Q9Y3P4 HMGN1P20-201ENST00000411849 300 ntBASIC4.79□□□□□ -1.64
RHBDD3Q9Y3P4 SLC20A1P1-201ENST00000413906 956 ntBASIC4.79□□□□□ -1.64
RHBDD3Q9Y3P4 AL121878.1-201ENST00000418638 859 ntBASIC4.79□□□□□ -1.64
RHBDD3Q9Y3P4 AC007161.1-204ENST00000423039 460 ntBASIC4.79□□□□□ -1.64
RHBDD3Q9Y3P4 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC4.79□□□□□ -1.64
RHBDD3Q9Y3P4 RPL7P56-201ENST00000429441 717 ntBASIC4.79□□□□□ -1.64
RHBDD3Q9Y3P4 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
RHBDD3Q9Y3P4 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC4.79□□□□□ -1.64
RHBDD3Q9Y3P4 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC4.79□□□□□ -1.64
RHBDD3Q9Y3P4 AL445665.1-202ENST00000452436 324 ntBASIC4.79□□□□□ -1.64
RHBDD3Q9Y3P4 CBX1P2-201ENST00000453841 458 ntBASIC4.79□□□□□ -1.64
RHBDD3Q9Y3P4 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC4.79□□□□□ -1.64
RHBDD3Q9Y3P4 PSAT1P4-201ENST00000466500 526 ntBASIC4.79□□□□□ -1.64
RHBDD3Q9Y3P4 NDUFA5P5-201ENST00000468361 342 ntBASIC4.79□□□□□ -1.64
RHBDD3Q9Y3P4 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC4.79□□□□□ -1.64
RHBDD3Q9Y3P4 OARD1-211ENST00000480585 829 ntTSL 3 BASIC4.79□□□□□ -1.64
RHBDD3Q9Y3P4 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC4.79□□□□□ -1.64
RHBDD3Q9Y3P4 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC4.79□□□□□ -1.64
RHBDD3Q9Y3P4 RN7SKP70-201ENST00000516655 271 ntBASIC4.79□□□□□ -1.64
RHBDD3Q9Y3P4 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC4.79□□□□□ -1.64
RHBDD3Q9Y3P4 AC138832.1-201ENST00000522871 556 ntBASIC4.79□□□□□ -1.64
RHBDD3Q9Y3P4 IGKV2-4-201ENST00000523070 340 ntBASIC4.79□□□□□ -1.64
RHBDD3Q9Y3P4 NEDD8-203ENST00000524927 653 ntTSL 2 BASIC4.79□□□□□ -1.64
RHBDD3Q9Y3P4 AC079600.1-201ENST00000550326 297 ntBASIC4.79□□□□□ -1.64
RHBDD3Q9Y3P4 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC4.79□□□□□ -1.64
RHBDD3Q9Y3P4 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC4.79□□□□□ -1.64
RHBDD3Q9Y3P4 AP001496.3-201ENST00000580230 913 ntBASIC4.79□□□□□ -1.64
RHBDD3Q9Y3P4 H3F3BP2-201ENST00000583907 357 ntBASIC4.79□□□□□ -1.64
RHBDD3Q9Y3P4 AC108738.1-201ENST00000603703 237 ntBASIC4.79□□□□□ -1.64
RHBDD3Q9Y3P4 AL135786.2-201ENST00000608422 615 ntBASIC4.79□□□□□ -1.64
RHBDD3Q9Y3P4 AC026367.3-201ENST00000619032 590 ntBASIC4.79□□□□□ -1.64
RHBDD3Q9Y3P4 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC4.79□□□□□ -1.64
RHBDD3Q9Y3P4 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
RHBDD3Q9Y3P4 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms