Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 AC090236.2-201ENST00000587933 1101 ntBASIC4.57□□□□□ -1.68
KCNIP3Q9Y2W7 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC4.57□□□□□ -1.68
KCNIP3Q9Y2W7 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC4.57□□□□□ -1.68
KCNIP3Q9Y2W7 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC4.57□□□□□ -1.68
KCNIP3Q9Y2W7 U91328.4-201ENST00000608919 517 ntBASIC4.57□□□□□ -1.68
KCNIP3Q9Y2W7 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC4.57□□□□□ -1.68
KCNIP3Q9Y2W7 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC4.57□□□□□ -1.68
KCNIP3Q9Y2W7 AC245014.3-201ENST00000618589 347 ntBASIC4.57□□□□□ -1.68
KCNIP3Q9Y2W7 RNU6-368P-201ENST00000620928 107 ntBASIC4.57□□□□□ -1.68
KCNIP3Q9Y2W7 AC211486.4-201ENST00000621495 113 ntBASIC4.57□□□□□ -1.68
KCNIP3Q9Y2W7 AL136228.1-201ENST00000622221 319 ntBASIC4.57□□□□□ -1.68
KCNIP3Q9Y2W7 RNU6-538P-201ENST00000622329 107 ntBASIC4.57□□□□□ -1.68
KCNIP3Q9Y2W7 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC4.57□□□□□ -1.68
KCNIP3Q9Y2W7 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC4.57□□□□□ -1.68
KCNIP3Q9Y2W7 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC4.57□□□□□ -1.68
KCNIP3Q9Y2W7 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC4.57□□□□□ -1.68
KCNIP3Q9Y2W7 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
KCNIP3Q9Y2W7 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
KCNIP3Q9Y2W7 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
KCNIP3Q9Y2W7 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
KCNIP3Q9Y2W7 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
KCNIP3Q9Y2W7 COPS4-209ENST00000511653 1695 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
KCNIP3Q9Y2W7 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
KCNIP3Q9Y2W7 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.57□□□□□ -1.68
KCNIP3Q9Y2W7 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
KCNIP3Q9Y2W7 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.57□□□□□ -1.68
KCNIP3Q9Y2W7 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
KCNIP3Q9Y2W7 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC4.56□□□□□ -1.68
KCNIP3Q9Y2W7 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
KCNIP3Q9Y2W7 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
KCNIP3Q9Y2W7 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
KCNIP3Q9Y2W7 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.56□□□□□ -1.68
KCNIP3Q9Y2W7 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.56□□□□□ -1.68
KCNIP3Q9Y2W7 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
KCNIP3Q9Y2W7 GAPDHP24-201ENST00000328713 983 ntBASIC4.56□□□□□ -1.68
KCNIP3Q9Y2W7 ZNF66-202ENST00000360204 1120 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
KCNIP3Q9Y2W7 OR2L2-201ENST00000366479 1134 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
KCNIP3Q9Y2W7 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC4.56□□□□□ -1.68
KCNIP3Q9Y2W7 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC4.56□□□□□ -1.68
KCNIP3Q9Y2W7 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC4.56□□□□□ -1.68
KCNIP3Q9Y2W7 AC012519.1-201ENST00000424588 610 ntBASIC4.56□□□□□ -1.68
KCNIP3Q9Y2W7 AC092646.1-201ENST00000427142 901 ntBASIC4.56□□□□□ -1.68
KCNIP3Q9Y2W7 AC090018.1-201ENST00000434369 367 ntBASIC4.56□□□□□ -1.68
KCNIP3Q9Y2W7 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC4.56□□□□□ -1.68
KCNIP3Q9Y2W7 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
KCNIP3Q9Y2W7 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
KCNIP3Q9Y2W7 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC4.56□□□□□ -1.68
KCNIP3Q9Y2W7 HMGB1P7-201ENST00000450921 612 ntBASIC4.56□□□□□ -1.68
KCNIP3Q9Y2W7 PRPF38AP1-201ENST00000451976 933 ntBASIC4.56□□□□□ -1.68
KCNIP3Q9Y2W7 AC245028.2-201ENST00000458673 253 ntBASIC4.56□□□□□ -1.68
KCNIP3Q9Y2W7 AC021660.1-201ENST00000465006 554 ntBASIC4.56□□□□□ -1.68
KCNIP3Q9Y2W7 AL122020.1-201ENST00000472287 459 ntBASIC4.56□□□□□ -1.68
KCNIP3Q9Y2W7 AC098847.1-201ENST00000473094 348 ntBASIC4.56□□□□□ -1.68
KCNIP3Q9Y2W7 NIP7P2-201ENST00000485801 544 ntBASIC4.56□□□□□ -1.68
KCNIP3Q9Y2W7 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC4.56□□□□□ -1.68
KCNIP3Q9Y2W7 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC4.56□□□□□ -1.68
KCNIP3Q9Y2W7 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
KCNIP3Q9Y2W7 DUTP7-201ENST00000507982 486 ntBASIC4.56□□□□□ -1.68
KCNIP3Q9Y2W7 HMGN1P16-201ENST00000508308 283 ntBASIC4.56□□□□□ -1.68
KCNIP3Q9Y2W7 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC4.56□□□□□ -1.68
KCNIP3Q9Y2W7 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC4.56□□□□□ -1.68
KCNIP3Q9Y2W7 SCARNA6.1-201ENST00000516989 238 ntBASIC4.56□□□□□ -1.68
KCNIP3Q9Y2W7 AC113423.2-201ENST00000517582 545 ntTSL 2 BASIC4.56□□□□□ -1.68
KCNIP3Q9Y2W7 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC4.56□□□□□ -1.68
KCNIP3Q9Y2W7 TPT1-AS1-209ENST00000520585 818 ntTSL 5 BASIC4.56□□□□□ -1.68
KCNIP3Q9Y2W7 AC022360.1-201ENST00000521058 340 ntBASIC4.56□□□□□ -1.68
KCNIP3Q9Y2W7 AC008676.3-201ENST00000521237 435 ntBASIC4.56□□□□□ -1.68
KCNIP3Q9Y2W7 AC013549.3-201ENST00000528792 419 ntTSL 3 BASIC4.56□□□□□ -1.68
KCNIP3Q9Y2W7 AC024940.3-201ENST00000538551 316 ntBASIC4.56□□□□□ -1.68
KCNIP3Q9Y2W7 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC4.56□□□□□ -1.68
KCNIP3Q9Y2W7 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC4.56□□□□□ -1.68
KCNIP3Q9Y2W7 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC4.56□□□□□ -1.68
KCNIP3Q9Y2W7 AC040958.1-201ENST00000561102 201 ntBASIC4.56□□□□□ -1.68
KCNIP3Q9Y2W7 AC084759.1-201ENST00000561168 290 ntBASIC4.56□□□□□ -1.68
KCNIP3Q9Y2W7 AC068768.2-201ENST00000602352 343 ntBASIC4.56□□□□□ -1.68
KCNIP3Q9Y2W7 AC009237.13-201ENST00000603193 276 ntBASIC4.56□□□□□ -1.68
KCNIP3Q9Y2W7 AC108738.1-201ENST00000603703 237 ntBASIC4.56□□□□□ -1.68
KCNIP3Q9Y2W7 AC233280.2-201ENST00000603917 1070 ntBASIC4.56□□□□□ -1.68
KCNIP3Q9Y2W7 AC117490.2-201ENST00000610042 594 ntBASIC4.56□□□□□ -1.68
KCNIP3Q9Y2W7 AL135999.3-201ENST00000610501 812 ntBASIC4.56□□□□□ -1.68
KCNIP3Q9Y2W7 AC073575.2-201ENST00000614212 627 ntBASIC4.56□□□□□ -1.68
KCNIP3Q9Y2W7 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC4.56□□□□□ -1.68
KCNIP3Q9Y2W7 AF117829.2-201ENST00000619538 361 ntBASIC4.56□□□□□ -1.68
KCNIP3Q9Y2W7 AC073869.8-201ENST00000641806 335 ntBASIC4.56□□□□□ -1.68
KCNIP3Q9Y2W7 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC4.56□□□□□ -1.68
KCNIP3Q9Y2W7 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
KCNIP3Q9Y2W7 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.56□□□□□ -1.68
KCNIP3Q9Y2W7 MAPK10-349ENST00000641767 3661 ntBASIC4.56□□□□□ -1.68
KCNIP3Q9Y2W7 AC079298.1-201ENST00000625026 1619 ntBASIC4.56□□□□□ -1.68
KCNIP3Q9Y2W7 AC097461.1-201ENST00000568928 2821 ntBASIC4.56□□□□□ -1.68
KCNIP3Q9Y2W7 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
KCNIP3Q9Y2W7 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC4.56□□□□□ -1.68
KCNIP3Q9Y2W7 AL450345.1-202ENST00000605741 3881 ntBASIC4.56□□□□□ -1.68
KCNIP3Q9Y2W7 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
KCNIP3Q9Y2W7 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC4.56□□□□□ -1.68
KCNIP3Q9Y2W7 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC4.55□□□□□ -1.68
KCNIP3Q9Y2W7 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
KCNIP3Q9Y2W7 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
KCNIP3Q9Y2W7 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
KCNIP3Q9Y2W7 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms