Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 NFU1P2-201ENST00000448700 469 ntBASIC8.39□□□□□ -1.07
ZC3H4Q9UPT8 OR6C5P-201ENST00000452388 923 ntBASIC8.39□□□□□ -1.07
ZC3H4Q9UPT8 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
ZC3H4Q9UPT8 CDC42P1-201ENST00000456658 548 ntBASIC8.39□□□□□ -1.07
ZC3H4Q9UPT8 RPL5P13-201ENST00000462840 709 ntBASIC8.39□□□□□ -1.07
ZC3H4Q9UPT8 FAM92A1P2-202ENST00000504766 877 ntBASIC8.39□□□□□ -1.07
ZC3H4Q9UPT8 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC8.39□□□□□ -1.07
ZC3H4Q9UPT8 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC8.39□□□□□ -1.07
ZC3H4Q9UPT8 AC135983.3-201ENST00000528049 1226 ntBASIC8.39□□□□□ -1.07
ZC3H4Q9UPT8 NANOGNBP2-201ENST00000544753 553 ntBASIC8.39□□□□□ -1.07
ZC3H4Q9UPT8 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
ZC3H4Q9UPT8 RN7SL366P-201ENST00000577957 292 ntBASIC8.39□□□□□ -1.07
ZC3H4Q9UPT8 MIR3614-201ENST00000581261 86 ntBASIC8.39□□□□□ -1.07
ZC3H4Q9UPT8 AC061999.1-201ENST00000624454 177 ntBASIC8.39□□□□□ -1.07
ZC3H4Q9UPT8 CCDC102B-210ENST00000584156 1554 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
ZC3H4Q9UPT8 AL138756.1-201ENST00000563434 4488 ntTSL 2 BASIC8.39□□□□□ -1.07
ZC3H4Q9UPT8 SCN9A-201ENST00000303354 9786 ntAPPRIS ALT1 TSL 5 BASIC8.39□□□□□ -1.07
ZC3H4Q9UPT8 BX322650.1-201ENST00000332359 2143 ntBASIC8.39□□□□□ -1.07
ZC3H4Q9UPT8 PLEKHS1-202ENST00000361048 3249 ntAPPRIS P3 TSL 2 BASIC8.39□□□□□ -1.07
ZC3H4Q9UPT8 DNA2-203ENST00000399180 3207 ntTSL 2 BASIC8.39□□□□□ -1.07
ZC3H4Q9UPT8 PLEKHS1-207ENST00000619563 3247 ntTSL 5 BASIC8.39□□□□□ -1.07
ZC3H4Q9UPT8 SAMMSON-222ENST00000641901 2727 ntBASIC8.39□□□□□ -1.07
ZC3H4Q9UPT8 FAT1-212ENST00000614102 14758 ntAPPRIS ALT1 TSL 5 BASIC8.39□□□□□ -1.07
ZC3H4Q9UPT8 MAGEB10-202ENST00000614159 1389 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
ZC3H4Q9UPT8 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
ZC3H4Q9UPT8 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC8.39□□□□□ -1.07
ZC3H4Q9UPT8 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC8.39□□□□□ -1.07
ZC3H4Q9UPT8 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
ZC3H4Q9UPT8 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC8.39□□□□□ -1.07
ZC3H4Q9UPT8 APOB-201ENST00000233242 14121 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
ZC3H4Q9UPT8 TP63-201ENST00000264731 4909 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
ZC3H4Q9UPT8 FAM221B-203ENST00000423537 2931 ntAPPRIS P2 TSL 1 (best) BASIC8.38□□□□□ -1.07
ZC3H4Q9UPT8 NRXN3-207ENST00000554719 4156 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
ZC3H4Q9UPT8 ZNF131-201ENST00000306938 2400 ntAPPRIS P1 TSL 2 BASIC8.38□□□□□ -1.07
ZC3H4Q9UPT8 MTCO1P11-201ENST00000429111 1528 ntBASIC8.38□□□□□ -1.07
ZC3H4Q9UPT8 AL034417.4-202ENST00000642135 2236 ntBASIC8.38□□□□□ -1.07
ZC3H4Q9UPT8 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC8.38□□□□□ -1.07
ZC3H4Q9UPT8 RNU4-91P-201ENST00000364778 135 ntBASIC8.38□□□□□ -1.07
ZC3H4Q9UPT8 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
ZC3H4Q9UPT8 RPL23AP59-201ENST00000399415 461 ntBASIC8.38□□□□□ -1.07
ZC3H4Q9UPT8 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC8.38□□□□□ -1.07
ZC3H4Q9UPT8 MIR1277-201ENST00000408536 78 ntBASIC8.38□□□□□ -1.07
ZC3H4Q9UPT8 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
ZC3H4Q9UPT8 RPL21P108-201ENST00000413857 481 ntBASIC8.38□□□□□ -1.07
ZC3H4Q9UPT8 RPS7P13-201ENST00000413955 498 ntBASIC8.38□□□□□ -1.07
ZC3H4Q9UPT8 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC8.38□□□□□ -1.07
ZC3H4Q9UPT8 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC8.38□□□□□ -1.07
ZC3H4Q9UPT8 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC8.38□□□□□ -1.07
ZC3H4Q9UPT8 AC016908.1-201ENST00000442571 1219 ntBASIC8.38□□□□□ -1.07
ZC3H4Q9UPT8 AC010240.2-201ENST00000445363 1205 ntBASIC8.38□□□□□ -1.07
ZC3H4Q9UPT8 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC8.38□□□□□ -1.07
ZC3H4Q9UPT8 RN7SL180P-201ENST00000466769 294 ntBASIC8.38□□□□□ -1.07
ZC3H4Q9UPT8 RN7SL177P-201ENST00000476596 299 ntBASIC8.38□□□□□ -1.07
ZC3H4Q9UPT8 RPL23AP37-201ENST00000479658 549 ntBASIC8.38□□□□□ -1.07
ZC3H4Q9UPT8 AC025459.1-201ENST00000504072 156 ntBASIC8.38□□□□□ -1.07
ZC3H4Q9UPT8 AC091868.2-201ENST00000506717 556 ntTSL 3 BASIC8.38□□□□□ -1.07
ZC3H4Q9UPT8 IGBP1P5-201ENST00000507524 1000 ntBASIC8.38□□□□□ -1.07
ZC3H4Q9UPT8 ATP1B1P1-201ENST00000509767 915 ntBASIC8.38□□□□□ -1.07
ZC3H4Q9UPT8 AC079395.1-201ENST00000510981 262 ntBASIC8.38□□□□□ -1.07
ZC3H4Q9UPT8 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC8.38□□□□□ -1.07
ZC3H4Q9UPT8 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC8.38□□□□□ -1.07
ZC3H4Q9UPT8 COX6B1P4-201ENST00000519826 484 ntBASIC8.38□□□□□ -1.07
ZC3H4Q9UPT8 ST13P6-201ENST00000522430 1102 ntBASIC8.38□□□□□ -1.07
ZC3H4Q9UPT8 RGS5-220ENST00000528689 566 ntTSL 5 BASIC8.38□□□□□ -1.07
ZC3H4Q9UPT8 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC8.38□□□□□ -1.07
ZC3H4Q9UPT8 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC8.38□□□□□ -1.07
ZC3H4Q9UPT8 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC8.38□□□□□ -1.07
ZC3H4Q9UPT8 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC8.38□□□□□ -1.07
ZC3H4Q9UPT8 AC004217.3-201ENST00000551552 878 ntBASIC8.38□□□□□ -1.07
ZC3H4Q9UPT8 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC8.38□□□□□ -1.07
ZC3H4Q9UPT8 AC068724.2-201ENST00000565685 532 ntTSL 4 BASIC8.38□□□□□ -1.07
ZC3H4Q9UPT8 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC8.38□□□□□ -1.07
ZC3H4Q9UPT8 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC8.38□□□□□ -1.07
ZC3H4Q9UPT8 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC8.38□□□□□ -1.07
ZC3H4Q9UPT8 AC015871.2-201ENST00000603605 948 ntBASIC8.38□□□□□ -1.07
ZC3H4Q9UPT8 AC090578.1-201ENST00000604955 591 ntBASIC8.38□□□□□ -1.07
ZC3H4Q9UPT8 MIR7844-201ENST00000616161 122 ntBASIC8.38□□□□□ -1.07
ZC3H4Q9UPT8 AP005212.3-201ENST00000619964 528 ntBASIC8.38□□□□□ -1.07
ZC3H4Q9UPT8 CTNND1-207ENST00000426142 5800 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
ZC3H4Q9UPT8 DAAM1-201ENST00000360909 4227 ntAPPRIS ALT2 TSL 1 (best) BASIC8.38□□□□□ -1.07
ZC3H4Q9UPT8 SOX6-202ENST00000396356 8865 ntAPPRIS P3 TSL 1 (best) BASIC8.38□□□□□ -1.07
ZC3H4Q9UPT8 MTND4P12-201ENST00000498999 1377 ntBASIC8.38□□□□□ -1.07
ZC3H4Q9UPT8 AC113615.1-201ENST00000507424 4121 ntTSL 2 BASIC8.38□□□□□ -1.07
ZC3H4Q9UPT8 PHF6-202ENST00000370799 4186 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
ZC3H4Q9UPT8 CAPS2-205ENST00000409445 2135 ntTSL 2 BASIC8.38□□□□□ -1.07
ZC3H4Q9UPT8 GSTM2-207ENST00000460717 1449 ntTSL 2 BASIC8.38□□□□□ -1.07
ZC3H4Q9UPT8 CTNND1-231ENST00000532463 5749 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
ZC3H4Q9UPT8 AC009948.5-201ENST00000624360 4406 ntBASIC8.38□□□□□ -1.07
ZC3H4Q9UPT8 RBM43-201ENST00000331426 4192 ntAPPRIS P2 TSL 1 (best) BASIC8.38□□□□□ -1.07
ZC3H4Q9UPT8 CRNKL1-207ENST00000536226 4009 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
ZC3H4Q9UPT8 TMC5-208ENST00000564959 2434 ntTSL 2 BASIC8.37□□□□□ -1.07
ZC3H4Q9UPT8 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
ZC3H4Q9UPT8 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
ZC3H4Q9UPT8 PDXDC1-201ENST00000325823 1113 ntTSL 5 BASIC8.37□□□□□ -1.07
ZC3H4Q9UPT8 OR1L1-202ENST00000373686 1083 ntBASIC8.37□□□□□ -1.07
ZC3H4Q9UPT8 AC009237.5-201ENST00000414271 501 ntBASIC8.37□□□□□ -1.07
ZC3H4Q9UPT8 AC009480.2-201ENST00000422916 432 ntBASIC8.37□□□□□ -1.07
ZC3H4Q9UPT8 TRIM60P10Y-201ENST00000425589 751 ntBASIC8.37□□□□□ -1.07
ZC3H4Q9UPT8 RPL5P34-201ENST00000426545 891 ntBASIC8.37□□□□□ -1.07
ZC3H4Q9UPT8 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC8.37□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms