Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC6.65□□□□□ -1.35
SCN11AQ9UI33 UNC13B-210ENST00000636694 8012 ntTSL 5 BASIC6.65□□□□□ -1.35
SCN11AQ9UI33 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC6.65□□□□□ -1.35
SCN11AQ9UI33 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC6.65□□□□□ -1.35
SCN11AQ9UI33 SNORA66-201ENST00000384792 133 ntBASIC6.64□□□□□ -1.35
SCN11AQ9UI33 RNA5SP113-201ENST00000410486 84 ntBASIC6.64□□□□□ -1.35
SCN11AQ9UI33 AL158827.1-201ENST00000416300 391 ntBASIC6.64□□□□□ -1.35
SCN11AQ9UI33 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC6.64□□□□□ -1.35
SCN11AQ9UI33 CEACAMP9-201ENST00000442990 513 ntBASIC6.64□□□□□ -1.35
SCN11AQ9UI33 AC073264.2-201ENST00000448886 166 ntBASIC6.64□□□□□ -1.35
SCN11AQ9UI33 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC6.64□□□□□ -1.35
SCN11AQ9UI33 RPL5P22-201ENST00000480199 884 ntBASIC6.64□□□□□ -1.35
SCN11AQ9UI33 HMGN2P25-201ENST00000486956 268 ntBASIC6.64□□□□□ -1.35
SCN11AQ9UI33 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC6.64□□□□□ -1.35
SCN11AQ9UI33 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC6.64□□□□□ -1.35
SCN11AQ9UI33 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC6.64□□□□□ -1.35
SCN11AQ9UI33 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC6.64□□□□□ -1.35
SCN11AQ9UI33 AC209154.1-201ENST00000582156 337 ntBASIC6.64□□□□□ -1.35
SCN11AQ9UI33 MIR4737-201ENST00000583979 81 ntBASIC6.64□□□□□ -1.35
SCN11AQ9UI33 AC105254.2-201ENST00000603636 436 ntBASIC6.64□□□□□ -1.35
SCN11AQ9UI33 AL391358.1-201ENST00000605342 190 ntBASIC6.64□□□□□ -1.35
SCN11AQ9UI33 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC6.64□□□□□ -1.35
SCN11AQ9UI33 AC078842.2-201ENST00000447529 1835 ntTSL 2 BASIC6.64□□□□□ -1.35
SCN11AQ9UI33 PLXNA4-201ENST00000321063 13061 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
SCN11AQ9UI33 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
SCN11AQ9UI33 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
SCN11AQ9UI33 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
SCN11AQ9UI33 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
SCN11AQ9UI33 AL359955.1-201ENST00000455242 3275 ntBASIC6.64□□□□□ -1.35
SCN11AQ9UI33 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC6.64□□□□□ -1.35
SCN11AQ9UI33 MEIS1-209ENST00000488550 5111 ntAPPRIS ALT1 TSL 1 (best) BASIC6.64□□□□□ -1.35
SCN11AQ9UI33 AC073365.1-203ENST00000641055 1992 ntBASIC6.64□□□□□ -1.35
SCN11AQ9UI33 SSPO-201ENST00000378016 15589 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
SCN11AQ9UI33 KIAA1210-201ENST00000402510 7824 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
SCN11AQ9UI33 UNC13B-209ENST00000635942 14550 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
SCN11AQ9UI33 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
SCN11AQ9UI33 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC6.64□□□□□ -1.35
SCN11AQ9UI33 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC6.64□□□□□ -1.35
SCN11AQ9UI33 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC6.64□□□□□ -1.35
SCN11AQ9UI33 AC090018.1-201ENST00000434369 367 ntBASIC6.64□□□□□ -1.35
SCN11AQ9UI33 PSAT1P4-201ENST00000466500 526 ntBASIC6.64□□□□□ -1.35
SCN11AQ9UI33 KRTAP5-14P-201ENST00000502328 121 ntBASIC6.64□□□□□ -1.35
SCN11AQ9UI33 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC6.64□□□□□ -1.35
SCN11AQ9UI33 RN7SKP260-201ENST00000516907 149 ntBASIC6.64□□□□□ -1.35
SCN11AQ9UI33 RGS5-219ENST00000528019 512 ntTSL 4 BASIC6.64□□□□□ -1.35
SCN11AQ9UI33 EDDM3DP-201ENST00000554692 434 ntBASIC6.64□□□□□ -1.35
SCN11AQ9UI33 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC6.64□□□□□ -1.35
SCN11AQ9UI33 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC6.64□□□□□ -1.35
SCN11AQ9UI33 MIR6839-201ENST00000620425 113 ntBASIC6.64□□□□□ -1.35
SCN11AQ9UI33 MIR6758-201ENST00000620653 63 ntBASIC6.64□□□□□ -1.35
SCN11AQ9UI33 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC6.64□□□□□ -1.35
SCN11AQ9UI33 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC6.64□□□□□ -1.35
SCN11AQ9UI33 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
SCN11AQ9UI33 UTP14C-201ENST00000521776 5529 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
SCN11AQ9UI33 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC6.64□□□□□ -1.35
SCN11AQ9UI33 THADA-207ENST00000405975 6114 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
SCN11AQ9UI33 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.35
SCN11AQ9UI33 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
SCN11AQ9UI33 ZNF292-202ENST00000369577 10610 ntAPPRIS P2 TSL 1 (best) BASIC6.63□□□□□ -1.35
SCN11AQ9UI33 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC6.63□□□□□ -1.35
SCN11AQ9UI33 BDNF-212ENST00000525528 4766 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
SCN11AQ9UI33 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
SCN11AQ9UI33 RBFOX2-205ENST00000405409 6932 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
SCN11AQ9UI33 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC6.63□□□□□ -1.35
SCN11AQ9UI33 OR5A2-201ENST00000302040 6318 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
SCN11AQ9UI33 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC6.63□□□□□ -1.35
SCN11AQ9UI33 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
SCN11AQ9UI33 AC126755.2-208ENST00000327792 462 ntBASIC6.63□□□□□ -1.35
SCN11AQ9UI33 AC138969.1-213ENST00000331436 462 ntBASIC6.63□□□□□ -1.35
SCN11AQ9UI33 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC6.63□□□□□ -1.35
SCN11AQ9UI33 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
SCN11AQ9UI33 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
SCN11AQ9UI33 RPL34P27-201ENST00000428810 349 ntBASIC6.63□□□□□ -1.35
SCN11AQ9UI33 HSPD1P12-201ENST00000429127 1069 ntBASIC6.63□□□□□ -1.35
SCN11AQ9UI33 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC6.63□□□□□ -1.35
SCN11AQ9UI33 AC090804.1-201ENST00000448870 490 ntBASIC6.63□□□□□ -1.35
SCN11AQ9UI33 TPT1P12-201ENST00000448968 492 ntBASIC6.63□□□□□ -1.35
SCN11AQ9UI33 IGBP1P4-201ENST00000503202 879 ntBASIC6.63□□□□□ -1.35
SCN11AQ9UI33 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC6.63□□□□□ -1.35
SCN11AQ9UI33 NMNAT1P1-201ENST00000554095 876 ntBASIC6.63□□□□□ -1.35
SCN11AQ9UI33 UBA2-208ENST00000592791 910 ntTSL 2 BASIC6.63□□□□□ -1.35
SCN11AQ9UI33 AC011453.2-201ENST00000603737 729 ntBASIC6.63□□□□□ -1.35
SCN11AQ9UI33 MAPK6PS2-201ENST00000379571 2060 ntBASIC6.63□□□□□ -1.35
SCN11AQ9UI33 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC6.63□□□□□ -1.35
SCN11AQ9UI33 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC6.63□□□□□ -1.35
SCN11AQ9UI33 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC6.63□□□□□ -1.35
SCN11AQ9UI33 AC132825.1-201ENST00000463573 2247 ntBASIC6.63□□□□□ -1.35
SCN11AQ9UI33 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC6.63□□□□□ -1.35
SCN11AQ9UI33 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
SCN11AQ9UI33 ZNF573-201ENST00000339503 2014 ntTSL 5 BASIC6.63□□□□□ -1.35
SCN11AQ9UI33 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC6.63□□□□□ -1.35
SCN11AQ9UI33 SCN2A-215ENST00000637266 8610 ntAPPRIS ALT1 TSL 5 BASIC6.62□□□□□ -1.35
SCN11AQ9UI33 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
SCN11AQ9UI33 NPM1P40-201ENST00000412758 733 ntBASIC6.62□□□□□ -1.35
SCN11AQ9UI33 OR2AM1P-201ENST00000422137 422 ntBASIC6.62□□□□□ -1.35
SCN11AQ9UI33 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC6.62□□□□□ -1.35
SCN11AQ9UI33 USP9YP9-201ENST00000429406 715 ntBASIC6.62□□□□□ -1.35
SCN11AQ9UI33 RPL19P16-201ENST00000433839 588 ntBASIC6.62□□□□□ -1.35
SCN11AQ9UI33 RPL5P25-201ENST00000441148 775 ntBASIC6.62□□□□□ -1.35
SCN11AQ9UI33 RPS17P2-201ENST00000461663 408 ntBASIC6.62□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 139.8 ms