Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC7.1□□□□□ -1.27
NPC1L1Q9UHC9 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC7.1□□□□□ -1.27
NPC1L1Q9UHC9 EIF3KP3-201ENST00000514461 639 ntBASIC7.1□□□□□ -1.27
NPC1L1Q9UHC9 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC7.1□□□□□ -1.27
NPC1L1Q9UHC9 AC022832.1-201ENST00000530718 645 ntBASIC7.1□□□□□ -1.27
NPC1L1Q9UHC9 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC7.1□□□□□ -1.27
NPC1L1Q9UHC9 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC7.1□□□□□ -1.27
NPC1L1Q9UHC9 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC7.1□□□□□ -1.27
NPC1L1Q9UHC9 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC7.1□□□□□ -1.27
NPC1L1Q9UHC9 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
NPC1L1Q9UHC9 AC092451.3-201ENST00000625067 1343 ntBASIC7.1□□□□□ -1.27
NPC1L1Q9UHC9 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC7.1□□□□□ -1.27
NPC1L1Q9UHC9 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC7.1□□□□□ -1.27
NPC1L1Q9UHC9 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC7.1□□□□□ -1.27
NPC1L1Q9UHC9 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
NPC1L1Q9UHC9 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC7.1□□□□□ -1.27
NPC1L1Q9UHC9 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
NPC1L1Q9UHC9 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC7.1□□□□□ -1.27
NPC1L1Q9UHC9 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC7.1□□□□□ -1.27
NPC1L1Q9UHC9 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
NPC1L1Q9UHC9 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC7.1□□□□□ -1.27
NPC1L1Q9UHC9 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
NPC1L1Q9UHC9 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
NPC1L1Q9UHC9 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC7.09□□□□□ -1.27
NPC1L1Q9UHC9 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
NPC1L1Q9UHC9 HSPA8P15-201ENST00000401676 786 ntBASIC7.09□□□□□ -1.27
NPC1L1Q9UHC9 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC7.09□□□□□ -1.27
NPC1L1Q9UHC9 DDX39BP1-205ENST00000422507 192 ntBASIC7.09□□□□□ -1.27
NPC1L1Q9UHC9 HSPE1P27-201ENST00000430808 296 ntBASIC7.09□□□□□ -1.27
NPC1L1Q9UHC9 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC7.09□□□□□ -1.27
NPC1L1Q9UHC9 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
NPC1L1Q9UHC9 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC7.09□□□□□ -1.27
NPC1L1Q9UHC9 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC7.09□□□□□ -1.27
NPC1L1Q9UHC9 AC004825.1-201ENST00000555068 586 ntBASIC7.09□□□□□ -1.27
NPC1L1Q9UHC9 OR11J2P-201ENST00000555298 907 ntBASIC7.09□□□□□ -1.27
NPC1L1Q9UHC9 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC7.09□□□□□ -1.27
NPC1L1Q9UHC9 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC7.09□□□□□ -1.27
NPC1L1Q9UHC9 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC7.09□□□□□ -1.27
NPC1L1Q9UHC9 AL445222.1-201ENST00000607259 628 ntBASIC7.09□□□□□ -1.27
NPC1L1Q9UHC9 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC7.09□□□□□ -1.27
NPC1L1Q9UHC9 LINC01739-205ENST00000641890 573 ntBASIC7.09□□□□□ -1.27
NPC1L1Q9UHC9 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
NPC1L1Q9UHC9 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC7.09□□□□□ -1.27
NPC1L1Q9UHC9 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC7.09□□□□□ -1.27
NPC1L1Q9UHC9 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
NPC1L1Q9UHC9 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC7.09□□□□□ -1.27
NPC1L1Q9UHC9 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
NPC1L1Q9UHC9 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC7.09□□□□□ -1.27
NPC1L1Q9UHC9 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
NPC1L1Q9UHC9 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC7.09□□□□□ -1.28
NPC1L1Q9UHC9 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC7.09□□□□□ -1.28
NPC1L1Q9UHC9 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
NPC1L1Q9UHC9 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC7.08□□□□□ -1.28
NPC1L1Q9UHC9 RNA5SP507-201ENST00000363603 121 ntBASIC7.08□□□□□ -1.28
NPC1L1Q9UHC9 RNU1-43P-201ENST00000365052 165 ntBASIC7.08□□□□□ -1.28
NPC1L1Q9UHC9 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC7.08□□□□□ -1.28
NPC1L1Q9UHC9 RNU1-106P-201ENST00000384382 164 ntBASIC7.08□□□□□ -1.28
NPC1L1Q9UHC9 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
NPC1L1Q9UHC9 RPL23AP27-201ENST00000415161 451 ntBASIC7.08□□□□□ -1.28
NPC1L1Q9UHC9 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
NPC1L1Q9UHC9 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC7.08□□□□□ -1.28
NPC1L1Q9UHC9 RPL5P2-201ENST00000429598 854 ntBASIC7.08□□□□□ -1.28
NPC1L1Q9UHC9 BX842559.2-201ENST00000451418 605 ntBASIC7.08□□□□□ -1.28
NPC1L1Q9UHC9 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC7.08□□□□□ -1.28
NPC1L1Q9UHC9 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC7.08□□□□□ -1.28
NPC1L1Q9UHC9 AC012400.1-201ENST00000518452 381 ntBASIC7.08□□□□□ -1.28
NPC1L1Q9UHC9 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC7.08□□□□□ -1.28
NPC1L1Q9UHC9 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC7.08□□□□□ -1.28
NPC1L1Q9UHC9 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC7.08□□□□□ -1.28
NPC1L1Q9UHC9 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC7.08□□□□□ -1.28
NPC1L1Q9UHC9 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC7.08□□□□□ -1.28
NPC1L1Q9UHC9 AC135068.12-201ENST00000637370 931 ntBASIC7.08□□□□□ -1.28
NPC1L1Q9UHC9 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
NPC1L1Q9UHC9 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
NPC1L1Q9UHC9 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC7.08□□□□□ -1.28
NPC1L1Q9UHC9 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
NPC1L1Q9UHC9 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
NPC1L1Q9UHC9 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC7.08□□□□□ -1.28
NPC1L1Q9UHC9 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
NPC1L1Q9UHC9 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC7.08□□□□□ -1.28
NPC1L1Q9UHC9 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
NPC1L1Q9UHC9 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
NPC1L1Q9UHC9 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
NPC1L1Q9UHC9 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC7.08□□□□□ -1.28
NPC1L1Q9UHC9 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC7.08□□□□□ -1.28
NPC1L1Q9UHC9 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC7.08□□□□□ -1.28
NPC1L1Q9UHC9 OR1L6-202ENST00000373684 1044 ntBASIC7.08□□□□□ -1.28
NPC1L1Q9UHC9 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
NPC1L1Q9UHC9 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC7.08□□□□□ -1.28
NPC1L1Q9UHC9 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
NPC1L1Q9UHC9 AC009238.2-201ENST00000431026 355 ntBASIC7.08□□□□□ -1.28
NPC1L1Q9UHC9 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC7.08□□□□□ -1.28
NPC1L1Q9UHC9 PRPF38AP1-201ENST00000451976 933 ntBASIC7.08□□□□□ -1.28
NPC1L1Q9UHC9 CBX1P2-201ENST00000453841 458 ntBASIC7.08□□□□□ -1.28
NPC1L1Q9UHC9 RN7SL808P-201ENST00000496066 299 ntBASIC7.08□□□□□ -1.28
NPC1L1Q9UHC9 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC7.08□□□□□ -1.28
NPC1L1Q9UHC9 AC092593.2-201ENST00000513866 913 ntBASIC7.08□□□□□ -1.28
NPC1L1Q9UHC9 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC7.08□□□□□ -1.28
NPC1L1Q9UHC9 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC7.08□□□□□ -1.28
NPC1L1Q9UHC9 AP002373.2-201ENST00000541631 1060 ntBASIC7.08□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms