Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
VPS29Q9UBQ0 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
VPS29Q9UBQ0 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
VPS29Q9UBQ0 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
VPS29Q9UBQ0 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
VPS29Q9UBQ0 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
VPS29Q9UBQ0 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
VPS29Q9UBQ0 TRIM51GP-201ENST00000534741 1350 ntBASIC5.06□□□□□ -1.6
VPS29Q9UBQ0 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
VPS29Q9UBQ0 SMG1P7-201ENST00000565246 2704 ntBASIC5.06□□□□□ -1.6
VPS29Q9UBQ0 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.06□□□□□ -1.6
VPS29Q9UBQ0 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
VPS29Q9UBQ0 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
VPS29Q9UBQ0 AL450345.1-202ENST00000605741 3881 ntBASIC5.06□□□□□ -1.6
VPS29Q9UBQ0 OR9K1P-201ENST00000326513 941 ntBASIC5.06□□□□□ -1.6
VPS29Q9UBQ0 RNA5SP335-201ENST00000363817 110 ntBASIC5.06□□□□□ -1.6
VPS29Q9UBQ0 MIR589-201ENST00000385238 99 ntBASIC5.06□□□□□ -1.6
VPS29Q9UBQ0 RAB5CP1-201ENST00000395972 580 ntBASIC5.06□□□□□ -1.6
VPS29Q9UBQ0 MGST1-205ENST00000396210 914 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
VPS29Q9UBQ0 RN7SKP293-201ENST00000411389 296 ntBASIC5.06□□□□□ -1.6
VPS29Q9UBQ0 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
VPS29Q9UBQ0 RPS29P14-201ENST00000431518 171 ntBASIC5.06□□□□□ -1.6
VPS29Q9UBQ0 AL161722.2-201ENST00000434731 981 ntBASIC5.06□□□□□ -1.6
VPS29Q9UBQ0 CLUHP1-201ENST00000435012 1190 ntBASIC5.06□□□□□ -1.6
VPS29Q9UBQ0 GAPDHP58-201ENST00000438477 1006 ntBASIC5.06□□□□□ -1.6
VPS29Q9UBQ0 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC5.06□□□□□ -1.6
VPS29Q9UBQ0 OR52E7P-201ENST00000452394 933 ntBASIC5.06□□□□□ -1.6
VPS29Q9UBQ0 RPL7P45-201ENST00000455851 743 ntBASIC5.06□□□□□ -1.6
VPS29Q9UBQ0 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC5.06□□□□□ -1.6
VPS29Q9UBQ0 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC5.06□□□□□ -1.6
VPS29Q9UBQ0 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
VPS29Q9UBQ0 RN7SL466P-201ENST00000497546 295 ntBASIC5.06□□□□□ -1.6
VPS29Q9UBQ0 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC5.06□□□□□ -1.6
VPS29Q9UBQ0 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC5.06□□□□□ -1.6
VPS29Q9UBQ0 AC020937.1-201ENST00000519677 1013 ntBASIC5.06□□□□□ -1.6
VPS29Q9UBQ0 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
VPS29Q9UBQ0 RBM22P1-201ENST00000578589 1214 ntBASIC5.06□□□□□ -1.6
VPS29Q9UBQ0 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC5.06□□□□□ -1.6
VPS29Q9UBQ0 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC5.06□□□□□ -1.6
VPS29Q9UBQ0 AC010503.3-201ENST00000594355 540 ntBASIC5.06□□□□□ -1.6
VPS29Q9UBQ0 AC010487.1-201ENST00000594408 1172 ntBASIC5.06□□□□□ -1.6
VPS29Q9UBQ0 AC126175.1-201ENST00000617041 758 ntBASIC5.06□□□□□ -1.6
VPS29Q9UBQ0 AL357153.4-201ENST00000620487 1016 ntBASIC5.06□□□□□ -1.6
VPS29Q9UBQ0 MTCO1P1-201ENST00000624263 1081 ntBASIC5.06□□□□□ -1.6
VPS29Q9UBQ0 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
VPS29Q9UBQ0 AC006210.2-201ENST00000367074 1545 ntBASIC5.06□□□□□ -1.6
VPS29Q9UBQ0 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
VPS29Q9UBQ0 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.06□□□□□ -1.6
VPS29Q9UBQ0 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.06□□□□□ -1.6
VPS29Q9UBQ0 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
VPS29Q9UBQ0 AC004158.1-201ENST00000564508 4319 ntBASIC5.06□□□□□ -1.6
VPS29Q9UBQ0 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
VPS29Q9UBQ0 AC010266.2-201ENST00000564741 3255 ntBASIC5.05□□□□□ -1.6
VPS29Q9UBQ0 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
VPS29Q9UBQ0 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
VPS29Q9UBQ0 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
VPS29Q9UBQ0 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC5.05□□□□□ -1.6
VPS29Q9UBQ0 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
VPS29Q9UBQ0 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
VPS29Q9UBQ0 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
VPS29Q9UBQ0 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
VPS29Q9UBQ0 OR51B4-201ENST00000380224 933 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
VPS29Q9UBQ0 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
VPS29Q9UBQ0 MIR105-1-201ENST00000385222 81 ntBASIC5.05□□□□□ -1.6
VPS29Q9UBQ0 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
VPS29Q9UBQ0 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC5.05□□□□□ -1.6
VPS29Q9UBQ0 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC5.05□□□□□ -1.6
VPS29Q9UBQ0 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC5.05□□□□□ -1.6
VPS29Q9UBQ0 RPL21P67-201ENST00000402896 478 ntBASIC5.05□□□□□ -1.6
VPS29Q9UBQ0 CYTOR-204ENST00000409898 560 ntTSL 5 BASIC5.05□□□□□ -1.6
VPS29Q9UBQ0 BX119904.3-201ENST00000428194 957 ntBASIC5.05□□□□□ -1.6
VPS29Q9UBQ0 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC5.05□□□□□ -1.6
VPS29Q9UBQ0 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.05□□□□□ -1.6
VPS29Q9UBQ0 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC5.05□□□□□ -1.6
VPS29Q9UBQ0 AC104634.1-201ENST00000452720 462 ntBASIC5.05□□□□□ -1.6
VPS29Q9UBQ0 MIR4435-2HG-214ENST00000453478 560 ntTSL 4 BASIC5.05□□□□□ -1.6
VPS29Q9UBQ0 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
VPS29Q9UBQ0 RN7SL189P-201ENST00000468631 289 ntBASIC5.05□□□□□ -1.6
VPS29Q9UBQ0 RN7SL273P-201ENST00000481561 299 ntBASIC5.05□□□□□ -1.6
VPS29Q9UBQ0 AC006427.1-201ENST00000514359 712 ntBASIC5.05□□□□□ -1.6
VPS29Q9UBQ0 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.05□□□□□ -1.6
VPS29Q9UBQ0 AC138832.1-201ENST00000522871 556 ntBASIC5.05□□□□□ -1.6
VPS29Q9UBQ0 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC5.05□□□□□ -1.6
VPS29Q9UBQ0 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
VPS29Q9UBQ0 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC5.05□□□□□ -1.6
VPS29Q9UBQ0 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC5.05□□□□□ -1.6
VPS29Q9UBQ0 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC5.05□□□□□ -1.6
VPS29Q9UBQ0 AC022884.2-201ENST00000578535 580 ntBASIC5.05□□□□□ -1.6
VPS29Q9UBQ0 RN7SL708P-201ENST00000580952 299 ntBASIC5.05□□□□□ -1.6
VPS29Q9UBQ0 MIR3614-201ENST00000581261 86 ntBASIC5.05□□□□□ -1.6
VPS29Q9UBQ0 MIR4660-201ENST00000583549 74 ntBASIC5.05□□□□□ -1.6
VPS29Q9UBQ0 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC5.05□□□□□ -1.6
VPS29Q9UBQ0 AC015982.1-201ENST00000608113 465 ntBASIC5.05□□□□□ -1.6
VPS29Q9UBQ0 MIR6861-201ENST00000618657 64 ntBASIC5.05□□□□□ -1.6
VPS29Q9UBQ0 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC5.05□□□□□ -1.6
VPS29Q9UBQ0 AC068870.3-201ENST00000625077 2536 ntBASIC5.05□□□□□ -1.6
VPS29Q9UBQ0 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
VPS29Q9UBQ0 ALB-209ENST00000503124 1741 ntTSL 5 BASIC5.05□□□□□ -1.6
VPS29Q9UBQ0 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
VPS29Q9UBQ0 Z95331.1-201ENST00000623075 23112 ntBASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 90.8 ms