Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC6.38□□□□□ -1.39
COL20A1Q9P218 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC6.38□□□□□ -1.39
COL20A1Q9P218 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC6.38□□□□□ -1.39
COL20A1Q9P218 SUMO2P15-201ENST00000604285 278 ntBASIC6.38□□□□□ -1.39
COL20A1Q9P218 HIRAP1-201ENST00000605318 787 ntBASIC6.38□□□□□ -1.39
COL20A1Q9P218 AL133481.2-203ENST00000607558 139 ntBASIC6.38□□□□□ -1.39
COL20A1Q9P218 RMST_5.1-201ENST00000618704 126 ntBASIC6.38□□□□□ -1.39
COL20A1Q9P218 AC019080.5-201ENST00000624891 757 ntBASIC6.38□□□□□ -1.39
COL20A1Q9P218 AP001002.2-201ENST00000625137 386 ntBASIC6.38□□□□□ -1.39
COL20A1Q9P218 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
COL20A1Q9P218 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
COL20A1Q9P218 AP000641.1-201ENST00000531988 1639 ntBASIC6.38□□□□□ -1.39
COL20A1Q9P218 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC6.38□□□□□ -1.39
COL20A1Q9P218 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
COL20A1Q9P218 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
COL20A1Q9P218 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
COL20A1Q9P218 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
COL20A1Q9P218 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC6.38□□□□□ -1.39
COL20A1Q9P218 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
COL20A1Q9P218 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
COL20A1Q9P218 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
COL20A1Q9P218 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
COL20A1Q9P218 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
COL20A1Q9P218 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
COL20A1Q9P218 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC6.37□□□□□ -1.39
COL20A1Q9P218 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC6.37□□□□□ -1.39
COL20A1Q9P218 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC6.37□□□□□ -1.39
COL20A1Q9P218 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
COL20A1Q9P218 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
COL20A1Q9P218 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
COL20A1Q9P218 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
COL20A1Q9P218 RAD1P1-201ENST00000231383 813 ntBASIC6.37□□□□□ -1.39
COL20A1Q9P218 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
COL20A1Q9P218 AMELX-201ENST00000348912 737 ntTSL 5 BASIC6.37□□□□□ -1.39
COL20A1Q9P218 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
COL20A1Q9P218 RNA5SP319-201ENST00000362768 119 ntBASIC6.37□□□□□ -1.39
COL20A1Q9P218 SNORA16A-201ENST00000384342 137 ntBASIC6.37□□□□□ -1.39
COL20A1Q9P218 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
COL20A1Q9P218 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
COL20A1Q9P218 AC009804.1-201ENST00000400949 179 ntBASIC6.37□□□□□ -1.39
COL20A1Q9P218 Z86062.1-201ENST00000406773 777 ntBASIC6.37□□□□□ -1.39
COL20A1Q9P218 AC096921.1-201ENST00000411661 375 ntBASIC6.37□□□□□ -1.39
COL20A1Q9P218 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC6.37□□□□□ -1.39
COL20A1Q9P218 CBX1P3-201ENST00000413296 527 ntBASIC6.37□□□□□ -1.39
COL20A1Q9P218 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC6.37□□□□□ -1.39
COL20A1Q9P218 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
COL20A1Q9P218 VN1R21P-201ENST00000426703 765 ntBASIC6.37□□□□□ -1.39
COL20A1Q9P218 LYPLA1P1-201ENST00000434514 622 ntBASIC6.37□□□□□ -1.39
COL20A1Q9P218 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC6.37□□□□□ -1.39
COL20A1Q9P218 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC6.37□□□□□ -1.39
COL20A1Q9P218 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC6.37□□□□□ -1.39
COL20A1Q9P218 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC6.37□□□□□ -1.39
COL20A1Q9P218 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC6.37□□□□□ -1.39
COL20A1Q9P218 MTND2P6-201ENST00000455337 1030 ntBASIC6.37□□□□□ -1.39
COL20A1Q9P218 RN7SL583P-201ENST00000475692 287 ntBASIC6.37□□□□□ -1.39
COL20A1Q9P218 RPS4XP1-201ENST00000482189 787 ntBASIC6.37□□□□□ -1.39
COL20A1Q9P218 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC6.37□□□□□ -1.39
COL20A1Q9P218 RPS26P24-201ENST00000497656 331 ntBASIC6.37□□□□□ -1.39
COL20A1Q9P218 AC109439.2-201ENST00000502421 564 ntTSL 4 BASIC6.37□□□□□ -1.39
COL20A1Q9P218 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC6.37□□□□□ -1.39
COL20A1Q9P218 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
COL20A1Q9P218 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
COL20A1Q9P218 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
COL20A1Q9P218 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC6.37□□□□□ -1.39
COL20A1Q9P218 AC016180.1-201ENST00000567945 403 ntBASIC6.37□□□□□ -1.39
COL20A1Q9P218 AL163952.1-202ENST00000569625 600 ntBASIC6.37□□□□□ -1.39
COL20A1Q9P218 AC013244.1-201ENST00000604279 193 ntBASIC6.37□□□□□ -1.39
COL20A1Q9P218 AC000068.2-201ENST00000608816 460 ntBASIC6.37□□□□□ -1.39
COL20A1Q9P218 AC005156.1-201ENST00000613371 573 ntBASIC6.37□□□□□ -1.39
COL20A1Q9P218 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC6.37□□□□□ -1.39
COL20A1Q9P218 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
COL20A1Q9P218 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC6.37□□□□□ -1.39
COL20A1Q9P218 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC6.37□□□□□ -1.39
COL20A1Q9P218 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC6.37□□□□□ -1.39
COL20A1Q9P218 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
COL20A1Q9P218 YES1-203ENST00000577961 4554 ntTSL 5 BASIC6.37□□□□□ -1.39
COL20A1Q9P218 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
COL20A1Q9P218 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
COL20A1Q9P218 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC6.36□□□□□ -1.39
COL20A1Q9P218 AC068870.1-201ENST00000563737 2455 ntBASIC6.36□□□□□ -1.39
COL20A1Q9P218 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC6.36□□□□□ -1.39
COL20A1Q9P218 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC6.36□□□□□ -1.39
COL20A1Q9P218 AC005225.5-201ENST00000623547 2225 ntBASIC6.36□□□□□ -1.39
COL20A1Q9P218 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
COL20A1Q9P218 RNA5SP183-201ENST00000362452 119 ntBASIC6.36□□□□□ -1.39
COL20A1Q9P218 RNU1-59P-201ENST00000364829 162 ntBASIC6.36□□□□□ -1.39
COL20A1Q9P218 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
COL20A1Q9P218 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
COL20A1Q9P218 RNU1-77P-201ENST00000390868 162 ntBASIC6.36□□□□□ -1.39
COL20A1Q9P218 RPL10P10-201ENST00000403509 664 ntBASIC6.36□□□□□ -1.39
COL20A1Q9P218 AL353692.2-201ENST00000407054 335 ntBASIC6.36□□□□□ -1.39
COL20A1Q9P218 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
COL20A1Q9P218 STAT4-203ENST00000409995 709 ntTSL 5 BASIC6.36□□□□□ -1.39
COL20A1Q9P218 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC6.36□□□□□ -1.39
COL20A1Q9P218 AC092570.3-201ENST00000420113 693 ntBASIC6.36□□□□□ -1.39
COL20A1Q9P218 SFR1P2-201ENST00000421841 730 ntBASIC6.36□□□□□ -1.39
COL20A1Q9P218 MORF4L1P7-201ENST00000426038 703 ntBASIC6.36□□□□□ -1.39
COL20A1Q9P218 AC092651.1-201ENST00000426110 312 ntBASIC6.36□□□□□ -1.39
COL20A1Q9P218 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC6.36□□□□□ -1.39
COL20A1Q9P218 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC6.36□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms