Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC6.15□□□□□ -1.42
BLOC1S4Q9NUP1 PPIAP19-201ENST00000486414 492 ntBASIC6.15□□□□□ -1.42
BLOC1S4Q9NUP1 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC6.15□□□□□ -1.42
BLOC1S4Q9NUP1 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC6.15□□□□□ -1.42
BLOC1S4Q9NUP1 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC6.15□□□□□ -1.42
BLOC1S4Q9NUP1 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC6.15□□□□□ -1.42
BLOC1S4Q9NUP1 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
BLOC1S4Q9NUP1 AC027544.3-201ENST00000535082 757 ntBASIC6.15□□□□□ -1.42
BLOC1S4Q9NUP1 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
BLOC1S4Q9NUP1 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC6.15□□□□□ -1.42
BLOC1S4Q9NUP1 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC6.15□□□□□ -1.42
BLOC1S4Q9NUP1 OR11H3P-201ENST00000554547 982 ntBASIC6.15□□□□□ -1.42
BLOC1S4Q9NUP1 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC6.15□□□□□ -1.42
BLOC1S4Q9NUP1 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC6.15□□□□□ -1.42
BLOC1S4Q9NUP1 AP005403.1-201ENST00000579720 229 ntBASIC6.15□□□□□ -1.42
BLOC1S4Q9NUP1 MIR1273E-201ENST00000581165 102 ntBASIC6.15□□□□□ -1.42
BLOC1S4Q9NUP1 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC6.15□□□□□ -1.42
BLOC1S4Q9NUP1 AP000769.2-201ENST00000602344 396 ntBASIC6.15□□□□□ -1.42
BLOC1S4Q9NUP1 AC005021.1-201ENST00000608730 355 ntBASIC6.15□□□□□ -1.42
BLOC1S4Q9NUP1 AP001962.1-201ENST00000624114 559 ntBASIC6.15□□□□□ -1.42
BLOC1S4Q9NUP1 AC135068.5-201ENST00000624197 983 ntBASIC6.15□□□□□ -1.42
BLOC1S4Q9NUP1 AC021766.1-201ENST00000624404 741 ntBASIC6.15□□□□□ -1.42
BLOC1S4Q9NUP1 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC6.15□□□□□ -1.42
BLOC1S4Q9NUP1 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
BLOC1S4Q9NUP1 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
BLOC1S4Q9NUP1 AC079097.1-201ENST00000512187 1399 ntBASIC6.15□□□□□ -1.43
BLOC1S4Q9NUP1 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC6.15□□□□□ -1.43
BLOC1S4Q9NUP1 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC6.15□□□□□ -1.43
BLOC1S4Q9NUP1 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
BLOC1S4Q9NUP1 GDA-209ENST00000545168 5362 ntTSL 2 BASIC6.15□□□□□ -1.43
BLOC1S4Q9NUP1 AL121950.1-201ENST00000624993 2077 ntBASIC6.14□□□□□ -1.43
BLOC1S4Q9NUP1 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
BLOC1S4Q9NUP1 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
BLOC1S4Q9NUP1 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
BLOC1S4Q9NUP1 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC6.14□□□□□ -1.43
BLOC1S4Q9NUP1 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
BLOC1S4Q9NUP1 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
BLOC1S4Q9NUP1 AC097063.1-201ENST00000426714 1797 ntBASIC6.14□□□□□ -1.43
BLOC1S4Q9NUP1 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC6.14□□□□□ -1.43
BLOC1S4Q9NUP1 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
BLOC1S4Q9NUP1 AC100757.1-201ENST00000616872 1835 ntBASIC6.14□□□□□ -1.43
BLOC1S4Q9NUP1 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC6.14□□□□□ -1.43
BLOC1S4Q9NUP1 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
BLOC1S4Q9NUP1 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
BLOC1S4Q9NUP1 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC6.14□□□□□ -1.43
BLOC1S4Q9NUP1 RN7SKP28-201ENST00000364770 305 ntBASIC6.14□□□□□ -1.43
BLOC1S4Q9NUP1 RN7SKP6-201ENST00000364795 319 ntBASIC6.14□□□□□ -1.43
BLOC1S4Q9NUP1 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
BLOC1S4Q9NUP1 RNU6-883P-201ENST00000384597 107 ntBASIC6.14□□□□□ -1.43
BLOC1S4Q9NUP1 MIR551A-201ENST00000385042 96 ntBASIC6.14□□□□□ -1.43
BLOC1S4Q9NUP1 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC6.14□□□□□ -1.43
BLOC1S4Q9NUP1 GSTA12P-201ENST00000402398 508 ntBASIC6.14□□□□□ -1.43
BLOC1S4Q9NUP1 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC6.14□□□□□ -1.43
BLOC1S4Q9NUP1 MTND2P40-201ENST00000436718 841 ntBASIC6.14□□□□□ -1.43
BLOC1S4Q9NUP1 AL358876.1-201ENST00000453364 1075 ntBASIC6.14□□□□□ -1.43
BLOC1S4Q9NUP1 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC6.14□□□□□ -1.43
BLOC1S4Q9NUP1 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC6.14□□□□□ -1.43
BLOC1S4Q9NUP1 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC6.14□□□□□ -1.43
BLOC1S4Q9NUP1 AC016550.3-201ENST00000515706 767 ntBASIC6.14□□□□□ -1.43
BLOC1S4Q9NUP1 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC6.14□□□□□ -1.43
BLOC1S4Q9NUP1 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC6.14□□□□□ -1.43
BLOC1S4Q9NUP1 AC112191.2-201ENST00000522428 333 ntBASIC6.14□□□□□ -1.43
BLOC1S4Q9NUP1 AC027026.1-201ENST00000532323 742 ntBASIC6.14□□□□□ -1.43
BLOC1S4Q9NUP1 AC087888.1-201ENST00000550884 1254 ntBASIC6.14□□□□□ -1.43
BLOC1S4Q9NUP1 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
BLOC1S4Q9NUP1 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC6.14□□□□□ -1.43
BLOC1S4Q9NUP1 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC6.14□□□□□ -1.43
BLOC1S4Q9NUP1 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC6.14□□□□□ -1.43
BLOC1S4Q9NUP1 RBM22P12-201ENST00000567098 1255 ntBASIC6.14□□□□□ -1.43
BLOC1S4Q9NUP1 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC6.14□□□□□ -1.43
BLOC1S4Q9NUP1 AC084373.1-201ENST00000603311 235 ntBASIC6.14□□□□□ -1.43
BLOC1S4Q9NUP1 LINC00216-201ENST00000623548 1126 ntBASIC6.14□□□□□ -1.43
BLOC1S4Q9NUP1 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC6.14□□□□□ -1.43
BLOC1S4Q9NUP1 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
BLOC1S4Q9NUP1 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
BLOC1S4Q9NUP1 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC6.14□□□□□ -1.43
BLOC1S4Q9NUP1 AL606537.1-201ENST00000607258 2011 ntBASIC6.14□□□□□ -1.43
BLOC1S4Q9NUP1 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
BLOC1S4Q9NUP1 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
BLOC1S4Q9NUP1 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC6.14□□□□□ -1.43
BLOC1S4Q9NUP1 AC132825.1-201ENST00000463573 2247 ntBASIC6.14□□□□□ -1.43
BLOC1S4Q9NUP1 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC6.14□□□□□ -1.43
BLOC1S4Q9NUP1 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
BLOC1S4Q9NUP1 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
BLOC1S4Q9NUP1 CD86-204ENST00000469710 1604 ntTSL 2 BASIC6.14□□□□□ -1.43
BLOC1S4Q9NUP1 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC6.14□□□□□ -1.43
BLOC1S4Q9NUP1 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC6.14□□□□□ -1.43
BLOC1S4Q9NUP1 AC093297.3-201ENST00000607056 2517 ntBASIC6.14□□□□□ -1.43
BLOC1S4Q9NUP1 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
BLOC1S4Q9NUP1 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
BLOC1S4Q9NUP1 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
BLOC1S4Q9NUP1 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC6.13□□□□□ -1.43
BLOC1S4Q9NUP1 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC6.13□□□□□ -1.43
BLOC1S4Q9NUP1 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
BLOC1S4Q9NUP1 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
BLOC1S4Q9NUP1 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC6.13□□□□□ -1.43
BLOC1S4Q9NUP1 RNA5SP234-201ENST00000363916 119 ntBASIC6.13□□□□□ -1.43
BLOC1S4Q9NUP1 SNORA27.3-201ENST00000364937 134 ntBASIC6.13□□□□□ -1.43
BLOC1S4Q9NUP1 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
BLOC1S4Q9NUP1 PPIAP9-201ENST00000403866 498 ntBASIC6.13□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 94.5 ms