Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 AL591167.1-201ENST00000607321 456 ntBASIC5.7□□□□□ -1.5
AMBRA1Q9C0C7 PART1_2.1-201ENST00000612397 250 ntBASIC5.7□□□□□ -1.5
AMBRA1Q9C0C7 OSTC-205ENST00000613215 876 ntTSL 2 BASIC5.7□□□□□ -1.5
AMBRA1Q9C0C7 AC012676.3-201ENST00000614983 479 ntBASIC5.7□□□□□ -1.5
AMBRA1Q9C0C7 AC078883.4-201ENST00000623218 367 ntBASIC5.7□□□□□ -1.5
AMBRA1Q9C0C7 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC5.7□□□□□ -1.5
AMBRA1Q9C0C7 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC5.7□□□□□ -1.5
AMBRA1Q9C0C7 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
AMBRA1Q9C0C7 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.7□□□□□ -1.5
AMBRA1Q9C0C7 AL355488.2-201ENST00000609909 2850 ntBASIC5.7□□□□□ -1.5
AMBRA1Q9C0C7 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
AMBRA1Q9C0C7 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
AMBRA1Q9C0C7 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
AMBRA1Q9C0C7 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC5.7□□□□□ -1.5
AMBRA1Q9C0C7 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC5.7□□□□□ -1.5
AMBRA1Q9C0C7 AC092451.3-201ENST00000625067 1343 ntBASIC5.7□□□□□ -1.5
AMBRA1Q9C0C7 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC5.7□□□□□ -1.5
AMBRA1Q9C0C7 AC027279.4-201ENST00000624371 2072 ntBASIC5.7□□□□□ -1.5
AMBRA1Q9C0C7 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
AMBRA1Q9C0C7 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
AMBRA1Q9C0C7 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
AMBRA1Q9C0C7 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC5.69□□□□□ -1.5
AMBRA1Q9C0C7 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
AMBRA1Q9C0C7 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC5.69□□□□□ -1.5
AMBRA1Q9C0C7 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC5.69□□□□□ -1.5
AMBRA1Q9C0C7 QRSL1P1-201ENST00000400977 1540 ntBASIC5.69□□□□□ -1.5
AMBRA1Q9C0C7 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
AMBRA1Q9C0C7 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC5.69□□□□□ -1.5
AMBRA1Q9C0C7 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC5.69□□□□□ -1.5
AMBRA1Q9C0C7 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
AMBRA1Q9C0C7 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
AMBRA1Q9C0C7 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
AMBRA1Q9C0C7 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC5.69□□□□□ -1.5
AMBRA1Q9C0C7 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
AMBRA1Q9C0C7 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
AMBRA1Q9C0C7 TPT1-204ENST00000379060 764 ntTSL 5 BASIC5.69□□□□□ -1.5
AMBRA1Q9C0C7 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
AMBRA1Q9C0C7 PRELID1P1-201ENST00000403549 660 ntBASIC5.69□□□□□ -1.5
AMBRA1Q9C0C7 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC5.69□□□□□ -1.5
AMBRA1Q9C0C7 RN7SKP240-201ENST00000410583 375 ntBASIC5.69□□□□□ -1.5
AMBRA1Q9C0C7 RN7SKP121-201ENST00000410842 305 ntBASIC5.69□□□□□ -1.5
AMBRA1Q9C0C7 AL449283.1-202ENST00000418249 604 ntBASIC5.69□□□□□ -1.5
AMBRA1Q9C0C7 NENFP1-201ENST00000419476 466 ntBASIC5.69□□□□□ -1.5
AMBRA1Q9C0C7 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC5.69□□□□□ -1.5
AMBRA1Q9C0C7 USP9YP21-201ENST00000420603 432 ntBASIC5.69□□□□□ -1.5
AMBRA1Q9C0C7 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC5.69□□□□□ -1.5
AMBRA1Q9C0C7 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
AMBRA1Q9C0C7 TXNL1P1-201ENST00000429528 554 ntBASIC5.69□□□□□ -1.5
AMBRA1Q9C0C7 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
AMBRA1Q9C0C7 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC5.69□□□□□ -1.5
AMBRA1Q9C0C7 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC5.69□□□□□ -1.5
AMBRA1Q9C0C7 AL353898.1-201ENST00000444055 238 ntBASIC5.69□□□□□ -1.5
AMBRA1Q9C0C7 CYCSP42-201ENST00000450823 238 ntBASIC5.69□□□□□ -1.5
AMBRA1Q9C0C7 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC5.69□□□□□ -1.5
AMBRA1Q9C0C7 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC5.69□□□□□ -1.5
AMBRA1Q9C0C7 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC5.69□□□□□ -1.5
AMBRA1Q9C0C7 AC078785.2-201ENST00000462010 1253 ntTSL 3 BASIC5.69□□□□□ -1.5
AMBRA1Q9C0C7 RN7SL326P-201ENST00000477493 296 ntBASIC5.69□□□□□ -1.5
AMBRA1Q9C0C7 TRBV5-2-201ENST00000489095 273 ntBASIC5.69□□□□□ -1.5
AMBRA1Q9C0C7 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC5.69□□□□□ -1.5
AMBRA1Q9C0C7 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC5.69□□□□□ -1.5
AMBRA1Q9C0C7 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC5.69□□□□□ -1.5
AMBRA1Q9C0C7 AC002456.2-201ENST00000509356 380 ntBASIC5.69□□□□□ -1.5
AMBRA1Q9C0C7 GUSBP9-201ENST00000510138 584 ntBASIC5.69□□□□□ -1.5
AMBRA1Q9C0C7 AC093752.1-206ENST00000511823 336 ntBASIC5.69□□□□□ -1.5
AMBRA1Q9C0C7 MTCO3P28-201ENST00000513351 515 ntBASIC5.69□□□□□ -1.5
AMBRA1Q9C0C7 AC118465.1-201ENST00000513820 1271 ntBASIC5.69□□□□□ -1.5
AMBRA1Q9C0C7 ASB8-203ENST00000535988 679 ntTSL 2 BASIC5.69□□□□□ -1.5
AMBRA1Q9C0C7 AP001858.2-201ENST00000536213 601 ntBASIC5.69□□□□□ -1.5
AMBRA1Q9C0C7 AC007834.2-201ENST00000536310 343 ntBASIC5.69□□□□□ -1.5
AMBRA1Q9C0C7 AP003717.3-201ENST00000544832 1180 ntBASIC5.69□□□□□ -1.5
AMBRA1Q9C0C7 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC5.69□□□□□ -1.5
AMBRA1Q9C0C7 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC5.69□□□□□ -1.5
AMBRA1Q9C0C7 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC5.69□□□□□ -1.5
AMBRA1Q9C0C7 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC5.69□□□□□ -1.5
AMBRA1Q9C0C7 AL589765.6-201ENST00000601909 549 ntBASIC5.69□□□□□ -1.5
AMBRA1Q9C0C7 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC5.69□□□□□ -1.5
AMBRA1Q9C0C7 AP000894.4-201ENST00000610185 483 ntBASIC5.69□□□□□ -1.5
AMBRA1Q9C0C7 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC5.69□□□□□ -1.5
AMBRA1Q9C0C7 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
AMBRA1Q9C0C7 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC5.69□□□□□ -1.5
AMBRA1Q9C0C7 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC5.69□□□□□ -1.5
AMBRA1Q9C0C7 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC5.69□□□□□ -1.5
AMBRA1Q9C0C7 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
AMBRA1Q9C0C7 AL161756.3-201ENST00000641216 2071 ntBASIC5.69□□□□□ -1.5
AMBRA1Q9C0C7 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
AMBRA1Q9C0C7 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
AMBRA1Q9C0C7 AL078595.2-201ENST00000605309 1780 ntBASIC5.69□□□□□ -1.5
AMBRA1Q9C0C7 AC093909.5-201ENST00000621839 1799 ntBASIC5.69□□□□□ -1.5
AMBRA1Q9C0C7 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
AMBRA1Q9C0C7 AL133243.2-201ENST00000610331 1621 ntBASIC5.69□□□□□ -1.5
AMBRA1Q9C0C7 AC109446.4-201ENST00000623235 2755 ntBASIC5.69□□□□□ -1.5
AMBRA1Q9C0C7 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
AMBRA1Q9C0C7 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
AMBRA1Q9C0C7 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
AMBRA1Q9C0C7 CIR1P2-201ENST00000514821 1342 ntBASIC5.69□□□□□ -1.5
AMBRA1Q9C0C7 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
AMBRA1Q9C0C7 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
AMBRA1Q9C0C7 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
AMBRA1Q9C0C7 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 126.5 ms