Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC8.58□□□□□ -1.04
IFT140Q96RY7 AC139713.2-214ENST00000642059 1811 ntBASIC8.58□□□□□ -1.04
IFT140Q96RY7 RPL12P34-201ENST00000424532 479 ntBASIC8.57□□□□□ -1.04
IFT140Q96RY7 CENPIP1-201ENST00000425713 902 ntBASIC8.57□□□□□ -1.04
IFT140Q96RY7 CREM-230ENST00000474931 626 ntTSL 2 BASIC8.57□□□□□ -1.04
IFT140Q96RY7 RN7SL244P-201ENST00000493405 297 ntBASIC8.57□□□□□ -1.04
IFT140Q96RY7 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC8.57□□□□□ -1.04
IFT140Q96RY7 AP001880.2-201ENST00000538233 448 ntBASIC8.57□□□□□ -1.04
IFT140Q96RY7 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC8.57□□□□□ -1.04
IFT140Q96RY7 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC8.57□□□□□ -1.04
IFT140Q96RY7 AC020910.3-201ENST00000603701 874 ntBASIC8.57□□□□□ -1.04
IFT140Q96RY7 AL356218.2-201ENST00000605264 187 ntBASIC8.57□□□□□ -1.04
IFT140Q96RY7 ZRANB3-210ENST00000536680 6943 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
IFT140Q96RY7 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
IFT140Q96RY7 AL137100.1-201ENST00000556703 1620 ntBASIC8.57□□□□□ -1.04
IFT140Q96RY7 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC8.57□□□□□ -1.04
IFT140Q96RY7 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
IFT140Q96RY7 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
IFT140Q96RY7 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
IFT140Q96RY7 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
IFT140Q96RY7 AC112243.1-201ENST00000623949 3851 ntBASIC8.57□□□□□ -1.04
IFT140Q96RY7 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
IFT140Q96RY7 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
IFT140Q96RY7 CYP2AC1P-201ENST00000407830 1173 ntBASIC8.57□□□□□ -1.04
IFT140Q96RY7 AC068535.1-201ENST00000416008 471 ntTSL 3 BASIC8.57□□□□□ -1.04
IFT140Q96RY7 BX323845.1-201ENST00000432417 179 ntBASIC8.57□□□□□ -1.04
IFT140Q96RY7 KRT8P51-201ENST00000438938 274 ntBASIC8.57□□□□□ -1.04
IFT140Q96RY7 IGHV5-78-201ENST00000450948 295 ntBASIC8.57□□□□□ -1.04
IFT140Q96RY7 AC013356.1-201ENST00000489027 564 ntBASIC8.57□□□□□ -1.04
IFT140Q96RY7 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC8.57□□□□□ -1.04
IFT140Q96RY7 AC012339.2-201ENST00000523996 453 ntBASIC8.57□□□□□ -1.04
IFT140Q96RY7 OR5M2P-201ENST00000529003 936 ntBASIC8.57□□□□□ -1.04
IFT140Q96RY7 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC8.57□□□□□ -1.04
IFT140Q96RY7 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC8.57□□□□□ -1.04
IFT140Q96RY7 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
IFT140Q96RY7 ANK2-212ENST00000506722 8051 ntAPPRIS ALT2 TSL 1 (best) BASIC8.56□□□□□ -1.04
IFT140Q96RY7 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC8.56□□□□□ -1.04
IFT140Q96RY7 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC8.56□□□□□ -1.04
IFT140Q96RY7 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC8.56□□□□□ -1.04
IFT140Q96RY7 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC8.56□□□□□ -1.04
IFT140Q96RY7 HMCN2-206ENST00000624552 15610 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
IFT140Q96RY7 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
IFT140Q96RY7 LPA-201ENST00000316300 6414 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
IFT140Q96RY7 SORCS1-210ENST00000622431 6701 ntTSL 5 BASIC8.56□□□□□ -1.04
IFT140Q96RY7 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC8.56□□□□□ -1.04
IFT140Q96RY7 ASNSP1-204ENST00000641977 1664 ntBASIC8.56□□□□□ -1.04
IFT140Q96RY7 OLFM4-201ENST00000219022 2897 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
IFT140Q96RY7 LARS-201ENST00000274562 2213 ntTSL 2 BASIC8.56□□□□□ -1.04
IFT140Q96RY7 SMG1-202ENST00000446231 16115 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
IFT140Q96RY7 GTF2IP5-201ENST00000414608 731 ntBASIC8.56□□□□□ -1.04
IFT140Q96RY7 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
IFT140Q96RY7 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC8.56□□□□□ -1.04
IFT140Q96RY7 AC096754.1-201ENST00000508904 818 ntBASIC8.56□□□□□ -1.04
IFT140Q96RY7 SOX5P1-201ENST00000524155 1127 ntBASIC8.56□□□□□ -1.04
IFT140Q96RY7 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC8.56□□□□□ -1.04
IFT140Q96RY7 AC084824.1-201ENST00000550917 1005 ntBASIC8.56□□□□□ -1.04
IFT140Q96RY7 KPNA2P3-201ENST00000584190 848 ntBASIC8.56□□□□□ -1.04
IFT140Q96RY7 SSX9-202ENST00000608568 580 ntTSL 4 BASIC8.56□□□□□ -1.04
IFT140Q96RY7 AL627309.5-201ENST00000484859 4860 ntTSL 5 BASIC8.56□□□□□ -1.04
IFT140Q96RY7 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC8.56□□□□□ -1.04
IFT140Q96RY7 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC8.55□□□□□ -1.04
IFT140Q96RY7 LCOR-201ENST00000286067 4542 ntBASIC8.55□□□□□ -1.04
IFT140Q96RY7 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
IFT140Q96RY7 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC8.55□□□□□ -1.04
IFT140Q96RY7 ATP2B4-204ENST00000367218 8918 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
IFT140Q96RY7 RNU1-74P-201ENST00000384108 171 ntBASIC8.55□□□□□ -1.04
IFT140Q96RY7 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC8.55□□□□□ -1.04
IFT140Q96RY7 AL121977.1-201ENST00000401636 979 ntBASIC8.55□□□□□ -1.04
IFT140Q96RY7 AL049697.2-201ENST00000403708 294 ntBASIC8.55□□□□□ -1.04
IFT140Q96RY7 RN7SKP263-201ENST00000411194 309 ntBASIC8.55□□□□□ -1.04
IFT140Q96RY7 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC8.55□□□□□ -1.04
IFT140Q96RY7 AL354824.1-201ENST00000424931 349 ntTSL 3 BASIC8.55□□□□□ -1.04
IFT140Q96RY7 AC023141.6-201ENST00000429418 337 ntBASIC8.55□□□□□ -1.04
IFT140Q96RY7 AC005154.2-201ENST00000438110 379 ntBASIC8.55□□□□□ -1.04
IFT140Q96RY7 AL136455.1-201ENST00000441083 1240 ntBASIC8.55□□□□□ -1.04
IFT140Q96RY7 OR1H1P-201ENST00000448731 937 ntBASIC8.55□□□□□ -1.04
IFT140Q96RY7 RN7SL319P-201ENST00000480656 221 ntBASIC8.55□□□□□ -1.04
IFT140Q96RY7 RN7SKP98-201ENST00000517070 156 ntBASIC8.55□□□□□ -1.04
IFT140Q96RY7 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC8.55□□□□□ -1.04
IFT140Q96RY7 AC005377.1-201ENST00000605126 456 ntBASIC8.55□□□□□ -1.04
IFT140Q96RY7 MIR6716-201ENST00000613413 80 ntBASIC8.55□□□□□ -1.04
IFT140Q96RY7 IPO5-229ENST00000631030 192 ntTSL 5 BASIC8.55□□□□□ -1.04
IFT140Q96RY7 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC8.55□□□□□ -1.04
IFT140Q96RY7 AL592148.3-201ENST00000608771 2646 ntBASIC8.55□□□□□ -1.04
IFT140Q96RY7 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
IFT140Q96RY7 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
IFT140Q96RY7 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC8.55□□□□□ -1.04
IFT140Q96RY7 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC8.55□□□□□ -1.04
IFT140Q96RY7 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
IFT140Q96RY7 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
IFT140Q96RY7 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC8.54□□□□□ -1.04
IFT140Q96RY7 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC8.54□□□□□ -1.04
IFT140Q96RY7 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
IFT140Q96RY7 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
IFT140Q96RY7 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
IFT140Q96RY7 CCT8P1-201ENST00000413611 1657 ntBASIC8.54□□□□□ -1.04
IFT140Q96RY7 SNORA48.7-201ENST00000391302 135 ntBASIC8.54□□□□□ -1.04
IFT140Q96RY7 RNU6ATAC34P-201ENST00000408879 121 ntBASIC8.54□□□□□ -1.04
IFT140Q96RY7 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC8.54□□□□□ -1.04
IFT140Q96RY7 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC8.54□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 69 ms